iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-104880

UUCD1 version

UUC-RaN-00714

Ensembl Protein ID

ENSRNOP00000014269.3

UniProt Accession

G3V7F1; G3V7F1_RAT

Genbank Protein ID

EDM03835.1; EDM03837.1

Protein Name

G protein beta subunit-like, isoform CRA_a; Target of rapamycin complex subunit LST8

Genbank Nucleotide ID

AC103090; CH473948

Gene Name

Mlst8; Gbl; rCG_32796

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000009667.4	ENSRNOT00000014269.4	ENSRNOP00000014269.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-31	106.1	219	249
UBD/Beta-Prp	2.70e-43	148.6	129	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           Ht     ++f +d tll+++s D t+k+W++
   Q: 219  HTRYALQCRFsPDsTLLATCSADQTCKIWRT 249
           888888999**999***************96 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls........tgkcvhtlk 91
           ++i+cv+ +p++  l++g ++g i +wd++t    + + + e  +t+  ++pd+++++ + + ++  vw+l         +  +  ++ 
   Q: 129  APINCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEFSITSAHIDPDASYMAAVNSAGNCFVWNLTggigdevtQLIPKTKIP 217
           699****************************8886666999999*************************99988777643333333444 PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
           +h++++l ++fsp++  l++ s+d+t ++w +++ + + e       + +  +g+ ++ ++++d++++v++s D+  rlW+++tg++ r
   Q: 218  AHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTElsikssnPGESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKR 306
           9*************************************99*****9999999************************************* PP
   S: 174  tltgghtdsvyslsfds 190
           +  g h+++v +l+f++
   Q: 307  EYGG-HQKAVVCLAFND 322
           **88.*********987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNTTPGTVGS DPVILATAGY DHTVRFWQAH SGICTRTVQH QDSQVNALEI TPDRSMIAAA 60
GYQHIRMYDL NSNNPNPIIS YDGVSKNIAS VGFHEDGRWM YTGGEDCTAR IWDLRSRNLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTAGCTT GGTTGGTAGG GTAGAGGATT GTGTATGTCG GTTGGGGGTG AAGGGACAAC 60
GACAGTGTAA TTCTTTCTTG GAGCTAAGCC TGGAAAATAG ACAGCAGCAC CGTGTTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031931--C:TORC1 complex
GO:0031932--C:TORC2 complex
GO:0043539--F:protein serine/threonine kinase activator activity
GO:0030838--P:positive regulation of actin filament polymerization
GO:0050731--P:positive regulation of peptidyl-tyrosine phosphorylation
GO:0032008--P:positive regulation of TOR signaling
GO:0043087--P:regulation of GTPase activity
GO:0038202--P:TORC1 signaling

KEGG

rno:64226

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000595	Aegilops tauschii	49.52	2.00e-84	305.00
IUUC-Aml-001813	Ailuropoda melanoleuca	97.85	0.00e+00	671.00
IUUC-Atr-002512	Amborella trichopoda	46.98	7.00e-80	290.00
IUUC-Apl-003495	Anas platyrhynchos	90.49	2.00e-153	534.00
IUUC-Aca-004613	Anolis carolinensis	94.17	0.00e+00	650.00
IUUC-Aly-006340	Arabidopsis lyrata	45.66	2.00e-79	288.00
IUUC-Ath-007273	Arabidopsis thaliana	45.34	1.00e-78	286.00
IUUC-Ago-007737	Ashbya gossypii	47.12	4.00e-82	297.00
IUUC-Acl-008090	Aspergillus clavatus	47.68	7.00e-60	224.00
IUUC-Afl-008490	Aspergillus flavus	40.82	2.00e-40	159.00
IUUC-Afu-009060	Aspergillus fumigatus	45.54	5.00e-53	201.00
IUUC-Ani-009251	Aspergillus nidulans	47.46	5.00e-60	224.00
IUUC-Ang-009528	Aspergillus niger	45.31	7.00e-76	276.00
IUUC-Aor-010005	Aspergillus oryzae	43.42	4.00e-69	254.00
IUUC-Ate-010423	Aspergillus terreus	48.10	3.00e-60	225.00
IUUC-Ame-011752	Astyanax mexicanus	92.02	0.00e+00	643.00
IUUC-Bgr-012299	Blumeria graminis	42.12	6.00e-70	257.00
IUUC-Bta-013007	Bos taurus	97.81	0.00e+00	660.00
IUUC-Bci-013987	Botrytis cinerea	42.77	1.00e-74	273.00
IUUC-Bdi-014082	Brachypodium distachyon	49.21	4.00e-84	304.00
IUUC-Bol-015088	Brassica oleracea	45.98	2.00e-79	288.00
IUUC-Bra-016682	Brassica rapa	41.62	6.00e-70	257.00
IUUC-Cel-018473	Caenorhabditis elegans	25.82	2.00e-36	146.00
IUUC-Cja-019216	Callithrix jacchus	97.38	1.00e-156	545.00
IUUC-Cfa-021229	Canis familiaris	98.16	0.00e+00	673.00
IUUC-Cpo-022270	Cavia porcellus	98.47	0.00e+00	676.00
IUUC-Cre-022742	Chlamydomonas reinhardtii	47.96	1.00e-84	306.00
IUUC-Csa-023275	Chlorocebus sabaeus	98.47	0.00e+00	675.00
IUUC-Cin-025588	Ciona intestinalis	63.81	1.00e-127	449.00
IUUC-Csv-026252	Ciona savignyi	64.98	2.00e-130	458.00
IUUC-Cgl-026418	Colletotrichum gloeosporioides	46.03	1.00e-77	283.00
IUUC-Cne-027013	Cryptococcus neoformans	43.13	5.00e-72	264.00
IUUC-Cme-027131	Cyanidioschyzon merolae	31.62	1.00e-49	190.00
IUUC-Dre-028424	Danio rerio	91.72	0.00e+00	641.00
IUUC-Dno-029327	Dasypus novemcinctus	98.16	0.00e+00	673.00
IUUC-Dor-030186	Dipodomys ordii	98.75	1.00e-93	335.00
IUUC-Dse-031475	Dothistroma septosporum	44.28	5.00e-75	274.00
IUUC-Dme-031826	Drosophila melanogaster	48.89	2.00e-92	332.00
IUUC-Ete-032252	Echinops telfairi	82.76	2.00e-138	484.00
IUUC-Eca-033889	Equus caballus	97.89	9.00e-139	485.00
IUUC-Fca-035989	Felis catus	97.85	0.00e+00	672.00
IUUC-Fal-036637	Ficedula albicollis	93.87	0.00e+00	652.00
IUUC-Fox-038066	Fusarium oxysporum	47.30	3.00e-81	295.00
IUUC-Fso-038288	Fusarium solani	44.76	7.00e-75	273.00
IUUC-Gmo-039477	Gadus morhua	92.52	0.00e+00	638.00
IUUC-Ggr-039990	Gaeumannomyces graminis	46.54	3.00e-77	281.00
IUUC-Gga-040890	Gallus gallus	93.87	0.00e+00	651.00
IUUC-Gac-041502	Gasterosteus aculeatus	91.72	0.00e+00	641.00
IUUC-Gma-042985	Glycine max	47.62	4.00e-81	294.00
IUUC-Ggo-045629	Gorilla gorilla	97.56	0.00e+00	669.00
IUUC-Hsa-045824	Homo sapiens	97.22	7.00e-170	589.00
IUUC-Hvu-047767	Hordeum vulgare	49.21	3.00e-84	304.00
IUUC-Itr-047932	Ictidomys tridecemlineatus	98.47	0.00e+00	676.00
IUUC-Kpa-049173	Komagataella pastoris	45.51	3.00e-81	295.00
IUUC-Lch-049703	Latimeria chalumnae	93.87	0.00e+00	651.00
IUUC-Lpe-050744	Leersia perrieri	45.08	4.00e-73	268.00
IUUC-Loc-052507	Lepisosteus oculatus	91.72	0.00e+00	640.00
IUUC-Lma-053084	Leptosphaeria maculans	43.77	8.00e-73	267.00
IUUC-Laf-053595	Loxodonta africana	96.63	0.00e+00	664.00
IUUC-Mcc-055634	Macaca mulatta	83.91	0.00e+00	636.00
IUUC-Meu-055925	Macropus eugenii	93.40	2.00e-164	571.00
IUUC-Mor-057131	Magnaporthe oryzae	43.85	2.00e-77	281.00
IUUC-Mpo-057524	Magnaporthe poae	46.54	1.00e-77	283.00
IUUC-Mtr-057980	Medicago truncatula	47.30	6.00e-81	293.00
IUUC-Mla-059082	Melampsora laricipopulina	39.31	1.00e-60	226.00
IUUC-Mga-059552	Meleagris gallopavo	91.87	2.00e-155	541.00
IUUC-Mvi-060504	Microbotryum violaceum	42.81	6.00e-69	255.00
IUUC-Mdo-062886	Monodelphis domestica	94.48	0.00e+00	654.00
IUUC-Mmu-063477	Mus musculus	99.08	0.00e+00	678.00
IUUC-Mac-065439	Musa acuminata	48.25	2.00e-82	298.00
IUUC-Mpu-066708	Mustela putorius furo	97.55	0.00e+00	669.00
IUUC-Mlu-067311	Myotis lucifugus	94.96	0.00e+00	661.00
IUUC-Nfi-068294	Neosartorya fischeri	45.37	2.00e-53	203.00
IUUC-Ncr-068811	Neurospora crassa	44.76	5.00e-76	277.00
IUUC-Nle-069632	Nomascus leucogenys	98.16	0.00e+00	673.00
IUUC-Opr-071128	Ochotona princeps	96.84	2.00e-109	387.00
IUUC-Ont-071494	Oreochromis niloticus	92.64	0.00e+00	645.00
IUUC-Oan-073298	Ornithorhynchus anatinus	92.06	6.00e-104	369.00
IUUC-Ocu-073983	Oryctolagus cuniculus	97.55	0.00e+00	669.00
IUUC-Oba-076001	Oryza barthii	44.44	2.00e-72	265.00
IUUC-Obr-076833	Oryza brachyantha	47.30	1.00e-80	292.00
IUUC-Ogl-077680	Oryza glaberrima	47.30	2.00e-80	292.00
IUUC-Ogu-078086	Oryza glumaepatula	43.33	3.00e-72	265.00
IUUC-Oin-079336	Oryza indica	47.30	2.00e-80	292.00
IUUC-Olo-080368	Oryza longistaminata	42.25	7.00e-59	220.00
IUUC-Oni-083046	Oryza nivara	44.44	2.00e-72	265.00
IUUC-Opu-084173	Oryza punctata	44.44	2.00e-72	265.00
IUUC-Oru-084599	Oryza rufipogon	44.44	2.00e-72	265.00
IUUC-Osa-086193	Oryza sativa	47.30	2.00e-80	292.00
IUUC-Ola-087216	Oryzias latipes	92.02	0.00e+00	644.00
IUUC-Olu-087852	Ostreococcus lucimarinus	46.98	3.00e-81	295.00
IUUC-Oga-088840	Otolemur garnettii	97.26	0.00e+00	668.00
IUUC-Oar-089294	Ovis aries	96.89	7.00e-170	589.00
IUUC-Ptr-090565	Pan troglodytes	98.16	0.00e+00	673.00
IUUC-Pan-092175	Papio anubis	98.47	0.00e+00	675.00
IUUC-Psi-093180	Pelodiscus sinensis	93.73	2.00e-156	544.00
IUUC-Pma-094705	Petromyzon marinus	82.82	4.00e-169	587.00
IUUC-Pno-095001	Phaeosphaeria nodorum	41.56	1.00e-62	233.00
IUUC-Ppa-095628	Physcomitrella patens	48.25	1.00e-83	302.00
IUUC-Pfo-097128	Poecilia formosa	91.72	0.00e+00	644.00
IUUC-Pab-098386	Pongo abelii	98.16	0.00e+00	673.00
IUUC-Pop-099064	Populus trichocarpa	47.94	7.00e-82	296.00
IUUC-Pca-100971	Procavia capensis	96.53	3.00e-169	587.00
IUUC-Ppe-101871	Prunus persica	47.94	1.00e-81	296.00
IUUC-Pva-102230	Pteropus vampyrus	77.89	2.00e-131	461.00
IUUC-Pgr-103511	Puccinia graminis	40.29	1.00e-63	236.00
IUUC-Ptt-103882	Puccinia triticina	37.57	4.00e-61	228.00
IUUC-Pte-104402	Pyrenophora teres	44.68	4.00e-74	271.00
IUUC-Pyt-104448	Pyrenophora triticirepentis	44.68	4.00e-74	271.00
IUUC-Sce-106266	Saccharomyces cerevisiae	47.44	1.00e-83	302.00
IUUC-Sha-106966	Sarcophilus harrisii	94.48	0.00e+00	654.00
IUUC-Sja-107797	Schizosaccharomyces japonicus	46.62	1.00e-83	302.00
IUUC-Spo-108366	Schizosaccharomyces pombe	45.34	6.00e-83	300.00
IUUC-Smo-108749	Selaginella moellendorffii	47.15	1.00e-78	286.00
IUUC-Sit-110807	Setaria italica	49.21	1.00e-83	302.00
IUUC-Sly-111879	Solanum lycopersicum	42.02	1.00e-48	186.00
IUUC-Sbi-114551	Sorghum bicolor	49.21	2.00e-83	302.00
IUUC-Sre-114962	Sporisorium reilianum	38.57	6.00e-71	261.00
IUUC-Ssc-115363	Sus scrofa	98.17	0.00e+00	672.00
IUUC-Tgu-116695	Taeniopygia guttata	76.99	2.00e-142	498.00
IUUC-Tru-117999	Takifugu rubripes	90.24	0.00e+00	634.00
IUUC-Tni-119973	Tetraodon nigroviridis	90.80	0.00e+00	640.00
IUUC-Tca-121688	Theobroma cacao	47.47	5.00e-81	294.00
IUUC-Tre-122158	Trichoderma reesei	42.86	7.00e-75	273.00
IUUC-Tvi-122511	Trichoderma virens	45.45	2.00e-77	281.00
IUUC-Tae-124124	Triticum aestivum	49.52	3.00e-84	305.00
IUUC-Tur-126228	Triticum urartu	46.98	3.00e-76	278.00
IUUC-Tme-127100	Tuber melanosporum	47.91	4.00e-85	307.00
IUUC-Ttr-128216	Tursiops truncatus	97.94	1.00e-53	203.00
IUUC-Uma-129358	Ustilago maydis	39.50	2.00e-72	266.00
IUUC-Vda-129756	Verticillium dahliae	45.71	5.00e-79	287.00
IUUC-Vvi-131581	Vitis vinifera	46.35	1.00e-78	286.00
IUUC-Xtr-132363	Xenopus tropicalis	91.10	0.00e+00	633.00
IUUC-Xma-133857	Xiphophorus maculatus	91.72	0.00e+00	644.00
IUUC-Yli-134368	Yarrowia lipolytica	45.19	5.00e-79	287.00
IUUC-Zma-135854	Zea mays	49.21	1.00e-83	302.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence