iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/UBX	UBX	15258615

Classification

Family	E-value	Score	Start	End
ULD/UDP/UFD/UBX	3.60e-19	67.6	188	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 3    teqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllve 80
           ++++tlq++lp+G ++ ++Fp++t+l++++ +++y++ ++ +p+ +++++Pr tl+ +++ ++lqe++L+p+++l++e
   Q: 188  QNYCTLQLKLPNGYTISNTFPPQTKLHKVRMWLDYNCYDDGTPYLFHRNIPRVTLTRNDELKSLQELDLLPRSTLILE 265
           679************************************************************************986 PP

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Involved in CDC48-dependent protein degradation through the ubiquitin/proteasome pathway.

Protein Sequence
(Fasta)

MYEMSGIDSL FHDRVVHDYS HTSEQVIVVY ISSAAGDNSW LHQWFKPGNL SDEERENILW 60
VRLVNGTKEC LLFKSIFPSS SAPSINILQN GLLECSIQGN SLSREQDPWE TFINGLQSVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACGAGA TGTCAGGTAT AGACAGCCTC TTTCATGATC GAGTTGTTCA TGATTACTCT 60
CATACTAGTG AGCAGGTTAT CGTCGTTTAC ATTAGTTCAG CAGCCGGGGA CAATTCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

Gene Ontology

GO:0005634--C:nucleus
GO:0030435--P:sporulation resulting in formation of a cellular spore
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sce:YJL048C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000309	Aegilops tauschii	32.69	2.00e-02	31.20
IUUC-Apl-003590	Anas platyrhynchos	23.02	7.00e-07	46.60
IUUC-Aca-004329	Anolis carolinensis	30.77	6.00e-11	58.50
IUUC-Afl-008671	Aspergillus flavus	32.10	1.00e-03	34.70
IUUC-Aor-010004	Aspergillus oryzae	32.10	2.00e-03	34.30
IUUC-Ame-010667	Astyanax mexicanus	27.18	4.00e-07	47.40
IUUC-Cpo-021736	Cavia porcellus	27.61	1.00e-09	54.70
IUUC-Cre-022908	Chlamydomonas reinhardtii	35.00	3.00e-04	37.70
IUUC-Cgl-026427	Colletotrichum gloeosporioides	30.95	1.00e-04	38.90
IUUC-Cne-027046	Cryptococcus neoformans	37.66	2.00e-05	40.80
IUUC-Dme-031927	Drosophila melanogaster	26.67	1.30e-01	29.60
IUUC-Fal-037033	Ficedula albicollis	28.38	1.00e-06	45.40
IUUC-Ggr-039936	Gaeumannomyces graminis	35.14	9.00e-06	42.40
IUUC-Gga-040965	Gallus gallus	27.63	1.00e-06	45.80
IUUC-Lpe-051210	Leersia perrieri	47.06	1.00e-03	33.50
IUUC-Loc-052883	Lepisosteus oculatus	27.03	2.00e-05	42.40
IUUC-Lma-053119	Leptosphaeria maculans	27.46	2.00e-06	45.40
IUUC-Mpo-057443	Magnaporthe poae	36.00	3.00e-06	43.90
IUUC-Mla-059083	Melampsora laricipopulina	35.80	1.60e-02	31.60
IUUC-Mga-059234	Meleagris gallopavo	24.46	1.00e-06	46.20
IUUC-Ont-072301	Oreochromis niloticus	31.08	8.00e-07	46.60
IUUC-Ola-087011	Oryzias latipes	32.50	7.00e-08	48.10
IUUC-Psi-093004	Pelodiscus sinensis	28.38	6.00e-06	43.50
IUUC-Pno-094996	Phaeosphaeria nodorum	33.70	4.00e-07	47.40
IUUC-Pte-104250	Pyrenophora teres	31.72	3.00e-07	47.80
IUUC-Pyt-104670	Pyrenophora triticirepentis	30.56	2.00e-07	48.50
IUUC-Sly-111539	Solanum lycopersicum	25.00	2.00e-03	37.00
IUUC-Stu-112548	Solanum tuberosum	34.00	2.00e-02	30.80
IUUC-Sre-115055	Sporisorium reilianum	29.33	5.00e-04	36.60
IUUC-Tgu-116959	Taeniopygia guttata	28.38	7.00e-07	46.60
IUUC-Tru-117812	Takifugu rubripes	24.62	8.00e-09	53.10
IUUC-Tni-120776	Tetraodon nigroviridis	28.57	1.00e-06	45.80
IUUC-Uma-129569	Ustilago maydis	29.11	1.00e-03	35.00
IUUC-Yli-134360	Yarrowia lipolytica	29.58	2.00e-04	37.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence