iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
miRNAMap
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	87.39	0.00e+00	1254.00	IUUC-Hsa-046508

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MVPSLKLQDL IEEIRGAKTQ AQEREVIQKE CAQIRASFRD GDPLQRHRQL AKLLYVHMLG 60
YPAHFGQMEC LKLIASPRFT DKRVGYLGAM LLLDERHDAH LLITNSIKND LSQGIQPVQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGTGCCT TCGTTGAAAC TTCAGGACCT AATCGAAGAG ATTCGTGGGG CCAAGACGCA 60
GGCCCAGGAA CGGGAGGTGA TCCAGAAGGA GTGCGCCCAA ATTCGGGCCT CCTTCCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0653--Protein transport
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR017107--AP1_complex_gsu
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR002553--Clathrin/coatomer_adapt-like_N
IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like

PROSITE

PS50180--GAE

Pfam

PF01602--Adaptin_N
PF02883--Alpha_adaptinC2

SMART

SM00809--Alpha_adaptinC2

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0005798--C:Golgi-associated vesicle
GO:0030133--C:transport vesicle
GO:0008565--F:protein transporter activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

rno:100362547

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001927	Ailuropoda melanoleuca	83.54	0.00e+00	1222.00
IUUC-Bta-012396	Bos taurus	83.26	0.00e+00	978.00
IUUC-Cja-019267	Callithrix jacchus	80.81	0.00e+00	981.00
IUUC-Cfa-020381	Canis familiaris	85.42	0.00e+00	1182.00
IUUC-Cpo-021411	Cavia porcellus	83.82	0.00e+00	1134.00
IUUC-Csa-023574	Chlorocebus sabaeus	87.52	0.00e+00	1213.00
IUUC-Dre-028339	Danio rerio	58.38	0.00e+00	914.00
IUUC-Dno-030066	Dasypus novemcinctus	83.96	0.00e+00	1241.00
IUUC-Dor-031086	Dipodomys ordii	86.24	0.00e+00	919.00
IUUC-Eca-033211	Equus caballus	86.75	0.00e+00	1248.00
IUUC-Eeu-034574	Erinaceus europaeus	78.09	0.00e+00	1102.00
IUUC-Ggo-044758	Gorilla gorilla	87.52	0.00e+00	1213.00
IUUC-Hsa-046508	Homo sapiens	87.26	0.00e+00	1206.00
IUUC-Itr-048524	Ictidomys tridecemlineatus	88.28	0.00e+00	1234.00
IUUC-Laf-054160	Loxodonta africana	86.62	0.00e+00	1216.00
IUUC-Mcc-055299	Macaca mulatta	87.64	0.00e+00	1219.00
IUUC-Meu-056526	Macropus eugenii	80.38	0.00e+00	1130.00
IUUC-Mmr-061441	Microcebus murinus	87.39	0.00e+00	1233.00
IUUC-Mdo-062443	Monodelphis domestica	77.53	0.00e+00	1117.00
IUUC-Mmu-063539	Mus musculus	94.30	0.00e+00	1380.00
IUUC-Mpu-065857	Mustela putorius furo	86.37	0.00e+00	1221.00
IUUC-Mlu-067650	Myotis lucifugus	85.61	0.00e+00	1170.00
IUUC-Nle-069751	Nomascus leucogenys	87.01	0.00e+00	1179.00
IUUC-Opr-071071	Ochotona princeps	81.48	0.00e+00	1080.00
IUUC-Ocu-074118	Oryctolagus cuniculus	83.86	0.00e+00	1131.00
IUUC-Oga-087949	Otolemur garnettii	86.24	0.00e+00	1211.00
IUUC-Oar-090094	Ovis aries	85.17	0.00e+00	1221.00
IUUC-Ptr-091184	Pan troglodytes	87.52	0.00e+00	1216.00
IUUC-Pan-092405	Papio anubis	87.90	0.00e+00	1212.00
IUUC-Pab-097941	Pongo abelii	87.77	0.00e+00	1219.00
IUUC-Pca-100934	Procavia capensis	83.31	0.00e+00	1188.00
IUUC-Pva-102188	Pteropus vampyrus	84.77	0.00e+00	798.00
IUUC-Pte-104314	Pyrenophora teres	38.24	3.00e-01	30.40
IUUC-Tbe-127973	Tupaia belangeri	79.75	5.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence