iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0033636	FBtr0333071	FBpp0305284
FBgn0033636	FBtr0113066	FBpp0111979
FBgn0033636	FBtr0088091	FBpp0087193
FBgn0033636	FBtr0333070	FBpp0305283

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.70e-14	51.5	2640	2687

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C +C++g++++ +l+ C+ C++ +H  C k++  ++ p+ + w+C +C +
   Q: 2640 NCQFCTSGENED-KLLLCDGCDKGYHTYCFKPK-MDNIPDGD-WYCYECVN 2687
           6******99987.6*******************.*******7.******76 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNKNAGDGSD GKNSNKNSNA GGGGGAGGPH DPTGLLDAAS LFAYWGRDPT GAAAAAASNP 60
LFNSQFNAAA AAGLGLLPQA GGASANDRYS MAAAAAAAAG AHHHQNTMAV AASQAASLAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGGTTTCT CTATCGAAGC GTTCGGACGT CGAAAAGATA AACCCCAATT TAAATCTAAT 60
CCATCTGCGA GCAAATTAAA CAACAATAAT GATAGATTCT TAAGCGGCGC GCACATACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR018501--DDT_dom
IPR016177--DNA-bd_dom
IPR001739--Methyl_CpG_DNA-bd
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50827--DDT
PS50982--MBD
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF02791--DDT
PF01429--MBD
PF00628--PHD
PF15612--WHIM1
PF15613--WSD

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00571--DDT
SM00391--MBD
SM00249--PHD

Gene Ontology

GO:0031010--C:ISWI-type complex
GO:0003677--F:DNA binding
GO:0008134--F:transcription factor binding
GO:0008270--F:zinc ion binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0007399--P:nervous system development
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

KEGG

dme:Dmel_CG10897

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002978	Amborella trichopoda	45.83	3.00e-13	68.20
IUUC-Ate-010407	Aspergillus terreus	50.00	3.00e-11	62.80
IUUC-Cel-018523	Caenorhabditis elegans	45.71	4.00e-22	100.00
IUUC-Mpo-057370	Magnaporthe poae	42.22	9.00e-15	75.50
IUUC-Mac-065288	Musa acuminata	48.15	7.00e-14	70.90
IUUC-Oin-079240	Oryza indica	46.94	2.00e-12	65.90
IUUC-Smo-109033	Selaginella moellendorffii	41.46	1.00e-11	65.90
IUUC-Stu-112265	Solanum tuberosum	26.71	1.00e-10	60.80
IUUC-Sbi-114173	Sorghum bicolor	50.00	9.00e-13	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence