iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-023011

Ensembl Protein ID

EDO95734

UniProt Accession

Q8GTZ9; A8JK64; O50041; Q8GTZ8; Q8H0J3; CCS1_CHLRE

Genbank Protein ID

AAB95195.1; AAB95196.1; AAM47499.1; AAM47499.1; AAM23259.1; AAM44130.1; AAM44130.1; AAM23262.1; EDO95667.1; EDO95734.1

Protein Name

Cytochrome c biogenesis protein CCS1, chloroplastic; C-type cytochrome synthesis protein 1

Genbank Nucleotide ID

U70999; U71000; AY095302; AY095301; AY095298; AY095304; AY095303; AY095299; DS497507; DS497231

Gene Name

CCS1; CHLREDRAFT_111044; CHLREDRAFT_195343

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_195343	EDO95734	EDO95734

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	36.36	1.20e-01	32.30	IUUC-Spo-108228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlamydomonas reinhardtii

Functional Description
(View)

Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.

Protein Sequence
(Fasta)

MGLLAASLAA CTYTRQWPAV KVAQRWRFLT QPKSLLKQGR TEVLPNARVS DLGAILLQRG 60
YQVFVKDGSL YGFKGLAGKL GPIGVHAALL LCLFGTAWSG FGTLKGNVMC PEGQDFQVAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCATCGA GTACTACCTG GTCAACTACC CAGACGGCGC GGAGAAGGTG CTGGGGTTCC 60
TGACTGGCGA CCTCATTCTG ACCCTACAGC TGGACCACAT CTACACCGCT GACTATTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0150--Chloroplast
KW-0181--Complete proteome
KW-0201--Cytochrome c-type biogenesis
KW-0472--Membrane
KW-0934--Plastid
KW-1185--Reference proteome
KW-0793--Thylakoid
KW-0809--Transit peptide
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR023494--Cyt_c_bgen_Ccs1/CcsB
IPR007816--ResB-like_domain

Pfam

PF05140--ResB

Gene Ontology

GO:0009535--C:chloroplast thylakoid membrane
GO:0016021--C:integral component of membrane
GO:0017004--P:cytochrome complex assembly

KEGG

cre:CHLREDRAFT_111044; cre:CHLREDRAFT_195343

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ete-032563	Echinops telfairi	29.69	2.80e-01	29.30
IUUC-Fal-037236	Ficedula albicollis	30.39	5.70e-01	29.30
IUUC-Mtr-058267	Medicago truncatula	27.27	6.10e-01	28.10
IUUC-Opr-070602	Ochotona princeps	32.35	7.80e-01	26.90
IUUC-Ola-087566	Oryzias latipes	29.23	2.40e-01	27.70
IUUC-Sce-106201	Saccharomyces cerevisiae	35.19	2.60e+00	25.40
IUUC-Spo-108228	Schizosaccharomyces pombe	33.33	1.20e-02	32.30
IUUC-Tgu-117028	Taeniopygia guttata	28.57	2.50e-01	30.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence