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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Sce-106386
UUCD1 version UUC-SaC-00074
Ensembl Protein ID YDR260C
UniProt Accession Q12379; D6VSP0; SWM1_YEAST
Genbank Protein ID CAA94099.1; CAA92718.1; AAS56053.1; DAA12100.1
Protein Name Anaphase-promoting complex subunit SWM1; Anaphase-promoting complex subunit 13; Spore wall maturation protein 1
Genbank Nucleotide ID Z70202; Z68329; AY557727; BK006938
Gene Name SWM1; APC13; YDR260C; YD9320A.11; YD9320A.11c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YDR260C YDR260C YDR260C
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAFPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/APC_C/APC_C APC_C 21107322; 16763193
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description



     Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C is thought to confer substrate specificity and, in the presence of ubiquitin-conjugating E2 enzymes, it catalyzes the formation of protein-ubiquitin conjugates that are subsequently degraded by the 26S proteasome. In early mitosis, the APC/C is activated by CDC20 and targets securin PDS1, the B-type cyclin CLB5, and other anaphase inhibitory proteins for proteolysis, thereby triggering the separation of sister chromatids at the metaphase-to-anaphase transition. In late mitosis and in G1, degradation of CLB5 allows activation of the APC/C by CDH1, which is needed to destroy CDC20 and the B-type cyclin CLB2 to allow exit from mitosis and creating the low CDK state necessary for cytokinesis and for reforming prereplicative complexes in G1 prior to another round of replication. SWM1 is required for APC/C activity in meiosis.
Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C is thought to confer substrate specificity and, in the presence of ubiquitin-conjugating E2 enzymes, it catalyzes the formation of protein-ubiquitin conjugates that are subsequently degraded by the 26S proteasome. In early mitosis, the APC/C is activated by CDC20 and targets securin PDS1, the B-type cyclin CLB5, and other anaphase inhibitory proteins for proteolysis, thereby triggering the separation of sister chromatids at the metaphase-to-anaphase transition. In late mitosis and in G1, degradation of CLB5 allows activation of the APC/C by CDH1, which is needed to destroy CDC20 and the B-type cyclin CLB2 to allow exit from mitosis and creating the low CDK state necessary for cytokinesis and for reforming prereplicative complexes in G1 prior to another round of replication. SWM1 is required for APC/C activity in meiosis.
Protein Sequence
(Fasta)
MSSSSYRDSY FQYRHLPAPH HILYAEWNQD ILALPDEVAN ITMAMKDNTR TDAEEGRAPQ 60
DGERNSNVRE SAQGKALMTS EQNSNRYWNS FHDEDDWNLF NGMELESNGV VTFAGQAFDH 120
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Protein Fasta Sequence



>IUUC-Sce-106386|E3,APC_C|Saccharomyces cerevisiae
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Nucleotide Sequence
(Fasta)
ATGAGTTCAA GTTCTTATAG GGATTCATAT TTTCAATACC GCCATTTACC AGCACCACAT 60
CACATATTAT ATGCGGAATG GAATCAAGAT ATACTGGCGC TTCCGGACGA AGTGGCAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sce-106386|E3,APC_C|Saccharomyces cerevisiae
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Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0469--Meiosis
KW-0498--Mitosis
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR008401--Apc13p

Pfam

PF05839--Apc13p

Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0005634--C:nucleus
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0030476--P:ascospore wall assembly
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:0016567--P:protein ubiquitination
GO:0030071--P:regulation of mitotic metaphase/anaphase transition

KEGG sce:YDR260C
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000570 Aegilops tauschii 37.93 8.40e-02 30.80
IUUC-Aml-002385 Ailuropoda melanoleuca 27.37 9.00e-03 31.20
IUUC-Aly-006518 Arabidopsis lyrata 27.71 1.00e-01 28.10
IUUC-Ath-007558 Arabidopsis thaliana 28.00 2.60e-01 27.30
IUUC-Ago-007808 Ashbya gossypii 23.53 6.00e-06 41.20
IUUC-Afu-008911 Aspergillus fumigatus 46.15 2.80e-01 26.20
IUUC-Ang-009855 Aspergillus niger 48.15 2.50e-01 27.70
IUUC-Ame-011834 Astyanax mexicanus 26.32 2.50e-02 29.60
IUUC-Cja-019830 Callithrix jacchus 27.37 6.00e-03 32.00
IUUC-Cfa-020522 Canis familiaris 27.37 9.00e-03 31.20
IUUC-Cpo-021563 Cavia porcellus 27.37 9.00e-03 31.20
IUUC-Cre-022839 Chlamydomonas reinhardtii 23.42 9.80e-02 28.90
IUUC-Csa-023453 Chlorocebus sabaeus 27.37 1.10e-02 30.80
IUUC-Cgl-026585 Colletotrichum gloeosporioides 26.25 1.30e-02 33.90
IUUC-Cme-027229 Cyanidioschyzon merolae 39.66 4.00e-01 26.90
IUUC-Dno-029657 Dasypus novemcinctus 27.37 9.00e-03 31.20
IUUC-Dor-030973 Dipodomys ordii 28.04 2.90e-01 29.30
IUUC-Fca-035443 Felis catus 27.37 9.00e-03 31.20
IUUC-Gmo-039028 Gadus morhua 26.32 1.70e-02 30.40
IUUC-Gac-041550 Gasterosteus aculeatus 26.32 3.20e-02 29.30
IUUC-Ggo-045006 Gorilla gorilla 27.37 7.00e-03 31.60
IUUC-Hsa-046151 Homo sapiens 27.37 3.00e-03 32.30
IUUC-Loc-052132 Lepisosteus oculatus 28.42 2.00e-03 33.50
IUUC-Laf-053525 Loxodonta africana 27.37 3.20e-02 29.60
IUUC-Mcc-055407 Macaca mulatta 27.37 6.00e-03 32.00
IUUC-Mor-057279 Magnaporthe oryzae 29.03 2.10e-01 28.90
IUUC-Mtr-057670 Medicago truncatula 42.86 2.20e-01 27.70
IUUC-Mla-058818 Melampsora laricipopulina 28.75 5.60e-02 30.40
IUUC-Mmr-060702 Microcebus murinus 37.25 2.00e-03 34.70
IUUC-Mmu-064290 Mus musculus 27.37 6.00e-03 32.00
IUUC-Mac-065506 Musa acuminata 36.11 4.90e-02 31.60
IUUC-Mpu-066063 Mustela putorius furo 27.37 8.00e-03 31.20
IUUC-Mlu-067739 Myotis lucifugus 27.37 6.00e-03 32.00
IUUC-Nfi-068524 Neosartorya fischeri 34.15 5.50e-01 26.20
IUUC-Nle-069097 Nomascus leucogenys 27.37 5.00e-03 31.60
IUUC-Opr-071175 Ochotona princeps 27.37 1.40e-02 30.40
IUUC-Ont-072536 Oreochromis niloticus 26.32 1.60e-02 30.40
IUUC-Oan-073159 Ornithorhynchus anatinus 23.08 5.00e-03 32.00
IUUC-Ocu-074258 Oryctolagus cuniculus 27.37 1.00e-02 30.80
IUUC-Oba-075445 Oryza barthii 30.36 1.10e-02 33.10
IUUC-Ogu-078638 Oryza glumaepatula 30.36 1.00e-02 33.10
IUUC-Oin-079959 Oryza indica 27.87 1.00e-02 33.10
IUUC-Olo-080806 Oryza longistaminata 27.87 1.10e-02 33.10
IUUC-Ome-081361 Oryza meridionalis 27.87 1.10e-02 33.10
IUUC-Oni-082983 Oryza nivara 27.87 1.00e-02 33.50
IUUC-Opu-084100 Oryza punctata 27.87 2.10e-02 32.30
IUUC-Oru-084772 Oryza rufipogon 27.87 1.00e-02 33.50
IUUC-Osa-085521 Oryza sativa 27.87 1.00e-02 33.50
IUUC-Ola-087106 Oryzias latipes 26.32 1.70e-02 30.00
IUUC-Oga-088790 Otolemur garnettii 27.37 1.00e-02 31.20
IUUC-Oar-089596 Ovis aries 27.37 1.50e-02 30.40
IUUC-Ptr-091597 Pan troglodytes 27.37 6.00e-03 32.00
IUUC-Pan-092133 Papio anubis 27.37 6.00e-03 32.00
IUUC-Psi-093235 Pelodiscus sinensis 33.33 2.20e-01 26.90
IUUC-Ppa-095420 Physcomitrella patens 26.17 1.40e-01 28.50
IUUC-Pab-098349 Pongo abelii 27.37 5.00e-03 32.00
IUUC-Pca-101109 Procavia capensis 26.32 3.30e-02 29.30
IUUC-Pva-102475 Pteropus vampyrus 27.37 9.00e-03 31.20
IUUC-Rno-105222 Rattus norvegicus 24.71 1.30e-01 30.00
IUUC-Sit-109810 Setaria italica 31.37 2.70e-02 32.00
IUUC-Tru-117847 Takifugu rubripes 35.56 5.30e-01 26.60
IUUC-Tsy-118817 Tarsius syrichta 27.37 8.00e-03 31.20
IUUC-Tae-123985 Triticum aestivum 25.93 7.00e-03 32.70
IUUC-Tur-126278 Triticum urartu 37.93 1.00e-01 30.40
IUUC-Tbe-127697 Tupaia belangeri 27.37 1.00e-02 31.20
IUUC-Ttr-128424 Tursiops truncatus 27.37 6.00e-03 32.00
IUUC-Uma-129490 Ustilago maydis 33.33 4.20e-02 29.30
IUUC-Vpa-130765 Vicugna pacos 27.37 9.00e-03 31.20
IUUC-Xtr-132935 Xenopus tropicalis 27.37 2.00e-02 30.00
IUUC-Xma-133343 Xiphophorus maculatus 31.96 5.20e-02 30.80
IUUC-Yli-134590 Yarrowia lipolytica 28.57 2.90e-01 27.70
Created Date 25-Jun-2017

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