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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105199
Ensembl Protein ID ENSRNOP00000074688.1
UniProt Accession F1LML2; F1LML2_RAT
Genbank Protein ID ENSRNOP00000074688
Protein Name Polyubiquitin-C
Genbank Nucleotide ID AC113658
Gene Name Ubc
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000057823.1 ENSRNOT00000085692.1 ENSRNOP00000074688.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNATRANSFACRAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 0 1325.7 685 760
ULD/UDP/UBQ/UBQ_PIM 3.40e-294 950.1 685 757
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8
   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 685  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
           89*************************************************************************9 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 685  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 757
           99********************************************************************986 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105199|ULD,NEDD8;ULD,UBQ_PIM|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTTTGTGAG GACTGCAGCC AACACCGCTG GTGAGGAGAA AGCCGCCACA CCCGGCGGGG 60
GCGGGGAGGC GGGAGGGGGC GAGAGACAGC CCGCGGCCCG GACGTTTGGT TTCCGTGGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105199|ULD,NEDD8;ULD,UBQ_PIM|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
Pfam

PF00240--ubiquitin
PRINTS

PR00348--UBIQUITIN
SMART

SM00213--UBQ
Gene Ontology

GO:0005737--C:cytoplasm
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000772 Aegilops tauschii 46.77 5.00e-47 183.00
IUUC-Aml-001483 Ailuropoda melanoleuca 99.56 5.00e-129 452.00
IUUC-Apl-003614 Anas platyrhynchos 99.64 2.00e-157 547.00
IUUC-Aca-004901 Anolis carolinensis 99.74 0.00e+00 752.00
IUUC-Aly-006562 Arabidopsis lyrata 92.48 0.00e+00 978.00
IUUC-Ath-006600 Arabidopsis thaliana 95.84 0.00e+00 873.00
IUUC-Ago-007937 Ashbya gossypii 96.05 0.00e+00 727.00
IUUC-Acl-008108 Aspergillus clavatus 95.74 1.00e-167 582.00
IUUC-Afl-008740 Aspergillus flavus 96.05 8.00e-168 582.00
IUUC-Afu-009031 Aspergillus fumigatus 92.68 5.00e-165 573.00
IUUC-Ani-009444 Aspergillus nidulans 96.05 5.00e-167 579.00
IUUC-Ang-009646 Aspergillus niger 96.05 1.00e-166 578.00
IUUC-Aor-009964 Aspergillus oryzae 96.05 8.00e-168 582.00
IUUC-Ate-010298 Aspergillus terreus 96.05 8.00e-168 582.00
IUUC-Ame-011696 Astyanax mexicanus 97.63 0.00e+00 730.00
IUUC-Bta-012771 Bos taurus 99.67 7.00e-174 602.00
IUUC-Bci-013832 Botrytis cinerea 97.37 4.00e-169 587.00
IUUC-Bdi-015013 Brachypodium distachyon 96.05 0.00e+00 728.00
IUUC-Bol-015598 Brassica oleracea 95.84 0.00e+00 873.00
IUUC-Bra-017586 Brassica rapa 96.05 9.00e-125 438.00
IUUC-Cel-018571 Caenorhabditis elegans 97.71 0.00e+00 1512.00
IUUC-Cja-019812 Callithrix jacchus 99.74 0.00e+00 752.00
IUUC-Cfa-020579 Canis familiaris 99.74 0.00e+00 752.00
IUUC-Cre-022556 Chlamydomonas reinhardtii 97.37 3.00e-82 296.00
IUUC-Csa-024086 Chlorocebus sabaeus 100.00 5.00e-129 452.00
IUUC-Cin-025600 Ciona intestinalis 96.06 0.00e+00 731.00
IUUC-Csv-026265 Ciona savignyi 94.77 0.00e+00 1372.00
IUUC-Cgl-026543 Colletotrichum gloeosporioides 96.05 2.00e-124 437.00
IUUC-Cne-026938 Cryptococcus neoformans 97.37 0.00e+00 879.00
IUUC-Dre-028641 Danio rerio 100.00 0.00e+00 1202.00
IUUC-Dno-029812 Dasypus novemcinctus 99.74 0.00e+00 752.00
IUUC-Dor-031044 Dipodomys ordii 99.28 2.00e-76 277.00
IUUC-Dse-031434 Dothistroma septosporum 96.05 2.00e-124 437.00
IUUC-Dme-031690 Drosophila melanogaster 99.87 0.00e+00 1502.00
IUUC-Eca-033850 Equus caballus 99.56 5.00e-129 452.00
IUUC-Fca-036501 Felis catus 99.56 5.00e-129 452.00
IUUC-Fal-036678 Ficedula albicollis 99.67 7.00e-174 602.00
IUUC-Fox-037730 Fusarium oxysporum 95.61 4.00e-124 436.00
IUUC-Fso-038454 Fusarium solani 95.72 2.00e-167 581.00
IUUC-Ggr-040118 Gaeumannomyces graminis 96.05 9.00e-168 582.00
IUUC-Gga-041058 Gallus gallus 100.00 6.00e-174 602.00
IUUC-Gac-042568 Gasterosteus aculeatus 99.34 0.00e+00 1192.00
IUUC-Gma-043881 Glycine max 95.87 0.00e+00 1018.00
IUUC-Ggo-044799 Gorilla gorilla 99.48 0.00e+00 750.00
IUUC-Hsa-046405 Homo sapiens 99.85 0.00e+00 1350.00
IUUC-Hvu-047805 Hordeum vulgare 34.31 7.00e-39 154.00
IUUC-Itr-048563 Ictidomys tridecemlineatus 95.60 9.00e-45 170.00
IUUC-Kpa-049199 Komagataella pastoris 96.05 8.00e-168 582.00
IUUC-Lpe-050731 Leersia perrieri 34.73 8.00e-43 167.00
IUUC-Lma-053015 Leptosphaeria maculans 94.84 7.00e-168 583.00
IUUC-Laf-053548 Loxodonta africana 99.74 0.00e+00 752.00
IUUC-Mcc-055561 Macaca mulatta 99.51 0.00e+00 1201.00
IUUC-Mor-056991 Magnaporthe oryzae 96.05 9.00e-168 582.00
IUUC-Mpo-057384 Magnaporthe poae 96.05 9.00e-168 582.00
IUUC-Mtr-058240 Medicago truncatula 95.17 0.00e+00 1483.00
IUUC-Mla-058957 Melampsora laricipopulina 95.86 0.00e+00 1015.00
IUUC-Mga-059240 Meleagris gallopavo 98.14 7.00e-88 315.00
IUUC-Mmr-061259 Microcebus murinus 94.32 1.00e-118 418.00
IUUC-Mdo-062630 Monodelphis domestica 99.81 0.00e+00 1051.00
IUUC-Mmu-063593 Mus musculus 99.46 0.00e+00 1446.00
IUUC-Mac-065145 Musa acuminata 86.18 1.00e-69 254.00
IUUC-Mpu-066106 Mustela putorius furo 83.61 1.00e-138 485.00
IUUC-Mlu-068100 Myotis lucifugus 99.67 6.00e-174 602.00
IUUC-Nfi-068475 Neosartorya fischeri 95.74 1.00e-167 582.00
IUUC-Ncr-068770 Neurospora crassa 96.05 4.00e-166 576.00
IUUC-Nle-069526 Nomascus leucogenys 99.67 6.00e-174 602.00
IUUC-Opr-070947 Ochotona princeps 100.00 4.00e-129 453.00
IUUC-Oan-073470 Ornithorhynchus anatinus 99.74 0.00e+00 752.00
IUUC-Ocu-074508 Oryctolagus cuniculus 99.56 5.00e-129 452.00
IUUC-Oba-075152 Oryza barthii 34.43 2.00e-41 162.00
IUUC-Obr-076236 Oryza brachyantha 96.05 0.00e+00 872.00
IUUC-Ogl-077274 Oryza glaberrima 90.53 0.00e+00 674.00
IUUC-Oin-079920 Oryza indica 96.05 0.00e+00 1017.00
IUUC-Olo-080418 Oryza longistaminata 34.35 4.00e-30 125.00
IUUC-Ome-081397 Oryza meridionalis 34.10 8.00e-41 160.00
IUUC-Oni-082299 Oryza nivara 33.77 2.00e-40 159.00
IUUC-Opu-083917 Oryza punctata 29.38 2.00e-29 124.00
IUUC-Oru-084544 Oryza rufipogon 78.95 4.00e-60 223.00
IUUC-Osa-085789 Oryza sativa 96.05 0.00e+00 1017.00
IUUC-Ola-087192 Oryzias latipes 93.19 0.00e+00 1184.00
IUUC-Olu-087888 Ostreococcus lucimarinus 95.80 0.00e+00 728.00
IUUC-Oga-089171 Otolemur garnettii 99.35 2.00e-84 303.00
IUUC-Oar-089386 Ovis aries 95.04 0.00e+00 973.00
IUUC-Ptr-091261 Pan troglodytes 99.74 0.00e+00 752.00
IUUC-Pan-092134 Papio anubis 99.78 0.00e+00 902.00
IUUC-Psi-093239 Pelodiscus sinensis 77.63 0.00e+00 649.00
IUUC-Pma-094556 Petromyzon marinus 99.01 0.00e+00 792.00
IUUC-Pno-095087 Phaeosphaeria nodorum 96.05 3.00e-124 437.00
IUUC-Ppa-095548 Physcomitrella patens 94.74 0.00e+00 1003.00
IUUC-Pfo-096371 Poecilia formosa 95.44 1.00e-130 458.00
IUUC-Pab-097884 Pongo abelii 99.84 0.00e+00 1200.00
IUUC-Pop-099396 Populus trichocarpa 96.05 0.00e+00 728.00
IUUC-Pca-100992 Procavia capensis 100.00 0.00e+00 687.00
IUUC-Ppe-102064 Prunus persica 95.84 0.00e+00 874.00
IUUC-Pva-102696 Pteropus vampyrus 99.56 5.00e-129 452.00
IUUC-Pgr-103301 Puccinia graminis 95.89 0.00e+00 1162.00
IUUC-Ptt-103710 Puccinia triticina 96.05 3.00e-168 583.00
IUUC-Pte-104277 Pyrenophora teres 96.05 2.00e-124 437.00
IUUC-Pyt-104779 Pyrenophora triticirepentis 96.05 2.00e-124 437.00
IUUC-Sce-106142 Saccharomyces cerevisiae 96.05 0.00e+00 726.00
IUUC-Sha-106780 Sarcophilus harrisii 98.69 8.00e-171 592.00
IUUC-Sja-107825 Schizosaccharomyces japonicus 96.05 0.00e+00 726.00
IUUC-Spo-108219 Schizosaccharomyces pombe 95.80 0.00e+00 727.00
IUUC-Ssl-108565 Sclerotinia sclerotiorum 97.04 3.00e-168 583.00
IUUC-Smo-109259 Selaginella moellendorffii 94.74 0.00e+00 1291.00
IUUC-Sit-109965 Setaria italica 96.05 0.00e+00 1017.00
IUUC-Sly-111224 Solanum lycopersicum 96.05 0.00e+00 1018.00
IUUC-Stu-112256 Solanum tuberosum 96.05 0.00e+00 1017.00
IUUC-Sbi-114776 Sorghum bicolor 95.98 0.00e+00 858.00
IUUC-Ssc-115672 Sus scrofa 99.44 0.00e+00 1046.00
IUUC-Tgu-116620 Taeniopygia guttata 95.86 5.00e-155 540.00
IUUC-Tsy-119558 Tarsius syrichta 89.54 5.00e-74 269.00
IUUC-Tni-120338 Tetraodon nigroviridis 100.00 2.00e-84 303.00
IUUC-Tca-120959 Theobroma cacao 95.62 0.00e+00 872.00
IUUC-Tre-122012 Trichoderma reesei 96.05 9.00e-168 582.00
IUUC-Tvi-122369 Trichoderma virens 96.05 9.00e-168 582.00
IUUC-Tae-123654 Triticum aestivum 96.05 0.00e+00 872.00
IUUC-Tur-126025 Triticum urartu 96.05 0.00e+00 1016.00
IUUC-Tme-126952 Tuber melanosporum 96.07 1.00e-167 582.00
IUUC-Ttr-128311 Tursiops truncatus 99.34 0.00e+00 897.00
IUUC-Uma-129417 Ustilago maydis 97.37 0.00e+00 878.00
IUUC-Vda-129663 Verticillium dahliae 96.05 2.00e-124 437.00
IUUC-Vvi-130874 Vitis vinifera 87.03 0.00e+00 1325.00
IUUC-Xtr-132052 Xenopus tropicalis 99.23 0.00e+00 1259.00
IUUC-Yli-134420 Yarrowia lipolytica 96.05 0.00e+00 871.00
IUUC-Zma-135881 Zea mays 96.05 0.00e+00 1017.00
Created Date 25-Jun-2017

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