iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000015909.1	ENSONIT00000020057.1	ENSONIP00000020040.1
ENSONIG00000015909.1	ENSONIT00000020058.1	ENSONIP00000020041.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	3.50e-06	27.6	123	213

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 54   asrrtprqpprgpsaaakpkaglrseaaaapapapaptptpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkal 142
           as    + p  g s+++    g r++ a     +      p   +++ l+++lp+e++++i+++l +++l++aa+vc+r+++la+++ l
   Q: 123  ASACPSKGPMEGASTSSTEAFGHRAKRARVSGKSH---DLPAAPAEQYLQQKLPDEVVLKIFSYLLEQDLCQAACVCKRFSQLANDPIL 208
           44444455666777777777777777766655443...445556678999*************************************** PP
   S: 143  wktvt 147
           wk+++
   Q: 209  WKRLY 213
           *9876 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MNSVRATNRR PRRVSRPRPV QPERNNGDRA APPPLPCSSK RPHRSAGASV IINHQPLSAL 60
PAITQPVSLR SWHTLFYLDE EAPAAAAAEM AIEESGPGAQ NSPYQLRRKT LLPKRTAAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGTTTTG GCAAGTCGTT TGATATGGTG CTTCTGATTG GTCGCTGCAG GGTGAGATTA 60
TGAGATGGCA AATATTATTG GTCCATCGGA CCTTGTGTTC TTTTTTTTTT TTCTCGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006633--Carb-bd_sugar_hydrolysis-dom
IPR001810--F-box_dom
IPR029799--FBX11/DRE-1
IPR007742--NosD_dom
IPR022441--Para_beta_helix_rpt-2
IPR006626--PbH1
IPR012334--Pectin_lyas_fold
IPR011050--Pectin_lyase_fold/virulence
IPR003126--Znf_UBR

PROSITE

PS50181--FBOX
PS51157--ZF_UBR

Pfam

PF12937--F-box-like
PF05048--NosD
PF02207--zf-UBR

SMART

SM00722--CASH
SM00256--FBOX
SM00710--PbH1
SM00396--ZnF_UBR1

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018135	Caenorhabditis elegans	59.05	0.00e+00	946.00
IUUC-Cin-025649	Ciona intestinalis	72.40	0.00e+00	1227.00
IUUC-Csv-026010	Ciona savignyi	73.84	0.00e+00	1197.00
IUUC-Cgl-026674	Colletotrichum gloeosporioides	35.37	2.00e-07	50.80
IUUC-Dme-031852	Drosophila melanogaster	68.73	0.00e+00	1111.00
IUUC-Gmo-039156	Gadus morhua	98.00	0.00e+00	1716.00
IUUC-Gac-042133	Gasterosteus aculeatus	99.06	0.00e+00	1729.00
IUUC-Ncr-068807	Neurospora crassa	45.45	2.00e-03	38.10
IUUC-Ola-087171	Oryzias latipes	93.39	0.00e+00	1724.00
IUUC-Oga-088010	Otolemur garnettii	97.69	0.00e+00	1600.00
IUUC-Pan-092606	Papio anubis	98.31	0.00e+00	1335.00
IUUC-Pfo-097290	Poecilia formosa	98.24	0.00e+00	1723.00
IUUC-Pgr-103283	Puccinia graminis	41.82	5.00e-07	49.70
IUUC-Sar-112927	Sorex araneus	98.78	0.00e+00	681.00
IUUC-Tru-118021	Takifugu rubripes	98.23	0.00e+00	1723.00
IUUC-Tni-119978	Tetraodon nigroviridis	97.07	0.00e+00	1698.00
IUUC-Tre-121945	Trichoderma reesei	35.59	3.00e-05	43.90
IUUC-Tvi-122264	Trichoderma virens	36.00	1.00e-06	48.50
IUUC-Tme-127013	Tuber melanosporum	38.98	4.00e-05	43.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence