iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-06	28.5	273	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikv 27
           H+ds t+la+ ++ ++++s++dD +ik+
   Q: 273  HKDSLTGLAYcPTlDIVASCGDD-SIKI 299
           9*********9988888888877.6776 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSFEKILYKY EEPHGIGDVY FIWQKALLAT TGTDGSVALY NRQGQLVQRI ILSGLCSGFA 60
WDQEGDLLGI ITSGSPNITL WDYNSQEKIS VETGLRDPLT CILWSKQQQL LAVGTGRGNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTGTAGTT GTAGTCGCCG CTACCATGGA AACGGAAAAT TCGTAAACAA AAGCCGGAAA 60
ATTAAAAATT GCAGAATGTA CACTAACGCA GCAGAAACGT AAAGCCAATA ATGTCCTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030991--C:intraciliary transport particle A
GO:0097730--C:non-motile cilium
GO:0060271--P:cilium assembly
GO:1905515--P:non-motile cilium assembly

KEGG

dme:Dmel_CG11237

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018591	Caenorhabditis elegans	33.04	0.00e+00	790.00
IUUC-Cpo-021608	Cavia porcellus	40.90	0.00e+00	1068.00
IUUC-Dre-028191	Danio rerio	41.52	0.00e+00	1086.00
IUUC-Gmo-039202	Gadus morhua	41.74	5.00e-148	518.00
IUUC-Gac-041476	Gasterosteus aculeatus	38.65	0.00e+00	1009.00
IUUC-Lch-049609	Latimeria chalumnae	46.91	3.00e-112	397.00
IUUC-Loc-052919	Lepisosteus oculatus	41.15	0.00e+00	1083.00
IUUC-Mga-060030	Meleagris gallopavo	41.02	0.00e+00	1080.00
IUUC-Mpu-066840	Mustela putorius furo	40.72	0.00e+00	1065.00
IUUC-Oan-073422	Ornithorhynchus anatinus	42.22	2.00e-107	382.00
IUUC-Ocu-073906	Oryctolagus cuniculus	40.50	0.00e+00	1059.00
IUUC-Ola-086596	Oryzias latipes	40.31	0.00e+00	1042.00
IUUC-Pma-094497	Petromyzon marinus	21.53	3.00e-06	47.80
IUUC-Rno-105208	Rattus norvegicus	40.60	0.00e+00	1060.00
IUUC-Sha-107068	Sarcophilus harrisii	41.21	0.00e+00	1084.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence