iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	Phospho.ELM	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-27	93.0	222	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gHt+ v+c++f   + + ++s+sdDg++++W+l++++
   Q: 222  GHTATVNCVEFnplNKNEFISCSDDGSLRLWNLDDHK 258
           8**********9954499***************9887 PP

Organism

Caenorhabditis elegans

Functional Description
(View)

Required for initiation of gastrulation.

Protein Sequence
(Fasta)

MDDNTAPKKN SEKKARVFDL QAMFAQTISN APRTEEPTHV PQSVSVSSKS ESGVSSSAVS 60
DDEDDFMPDL PPGFQMQQSE AGPSSSRAEG PEDSDDSDFD ETEAISIIKL IPAACEAKIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCACCACAA TGGATGATAA TACGGCTCCA AAAAAGAATT CTGAAAAGAA GGCACGCGTC 60
TTTGACCTCC AAGCAATGTT CGCGCAAACG ATAAGCAATG CTCCCAGAAC TGAGGAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0217--Developmental protein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005623--C:cell
GO:0042074--P:cell migration involved in gastrulation
GO:0000132--P:establishment of mitotic spindle orientation
GO:0007346--P:regulation of mitotic cell cycle

KEGG

cel:CELE_T05H4.14

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000150	Aegilops tauschii	34.58	6.00e-78	284.00
IUUC-Aml-002098	Ailuropoda melanoleuca	36.09	2.00e-55	208.00
IUUC-Atr-002886	Amborella trichopoda	33.99	1.00e-75	275.00
IUUC-Apl-004059	Anas platyrhynchos	39.67	4.00e-86	310.00
IUUC-Aca-004427	Anolis carolinensis	40.85	8.00e-96	343.00
IUUC-Aly-006122	Arabidopsis lyrata	35.18	3.00e-74	271.00
IUUC-Ath-006952	Arabidopsis thaliana	34.58	2.00e-74	271.00
IUUC-Acl-008150	Aspergillus clavatus	29.14	2.00e-38	152.00
IUUC-Afl-008722	Aspergillus flavus	27.81	1.00e-36	146.00
IUUC-Afu-009003	Aspergillus fumigatus	27.81	1.00e-37	149.00
IUUC-Ani-009306	Aspergillus nidulans	25.46	5.00e-38	150.00
IUUC-Ang-009780	Aspergillus niger	28.69	3.00e-33	135.00
IUUC-Aor-010109	Aspergillus oryzae	27.81	1.00e-36	146.00
IUUC-Ate-010484	Aspergillus terreus	28.27	1.00e-37	149.00
IUUC-Ame-011248	Astyanax mexicanus	38.85	3.00e-102	364.00
IUUC-Bgr-012093	Blumeria graminis	26.13	7.00e-41	160.00
IUUC-Bta-013581	Bos taurus	37.57	1.00e-92	332.00
IUUC-Bci-013900	Botrytis cinerea	24.72	7.00e-40	157.00
IUUC-Bdi-014951	Brachypodium distachyon	35.36	6.00e-80	290.00
IUUC-Bol-016482	Brassica oleracea	33.99	6.00e-72	263.00
IUUC-Bra-016976	Brassica rapa	34.34	2.00e-71	262.00
IUUC-Cja-019101	Callithrix jacchus	37.60	7.00e-92	330.00
IUUC-Cfa-020638	Canis familiaris	37.77	3.00e-93	335.00
IUUC-Cpo-022323	Cavia porcellus	37.77	2.00e-93	335.00
IUUC-Csa-023743	Chlorocebus sabaeus	37.18	4.00e-91	327.00
IUUC-Cho-024356	Choloepus hoffmanni	30.96	7.00e-35	140.00
IUUC-Cin-025151	Ciona intestinalis	36.33	2.00e-85	308.00
IUUC-Csv-025820	Ciona savignyi	35.23	1.00e-83	303.00
IUUC-Cgl-026404	Colletotrichum gloeosporioides	25.82	9.00e-38	150.00
IUUC-Cne-026790	Cryptococcus neoformans	34.02	5.00e-61	227.00
IUUC-Dno-029526	Dasypus novemcinctus	37.18	4.00e-92	331.00
IUUC-Dse-031347	Dothistroma septosporum	25.61	2.00e-43	169.00
IUUC-Dme-032052	Drosophila melanogaster	36.94	1.00e-94	339.00
IUUC-Ete-032851	Echinops telfairi	36.71	6.00e-48	183.00
IUUC-Fca-035931	Felis catus	37.97	2.00e-93	335.00
IUUC-Fal-037139	Ficedula albicollis	40.59	1.00e-95	342.00
IUUC-Fox-037696	Fusarium oxysporum	25.19	5.00e-40	157.00
IUUC-Fso-038349	Fusarium solani	24.57	3.00e-39	155.00
IUUC-Gmo-039027	Gadus morhua	40.33	2.00e-100	358.00
IUUC-Ggr-039982	Gaeumannomyces graminis	27.09	1.00e-33	136.00
IUUC-Gga-041080	Gallus gallus	39.04	6.00e-96	343.00
IUUC-Gac-041296	Gasterosteus aculeatus	40.61	9.00e-102	362.00
IUUC-Gma-044316	Glycine max	35.05	1.00e-79	289.00
IUUC-Ggo-045123	Gorilla gorilla	36.40	4.00e-82	297.00
IUUC-Hsa-046541	Homo sapiens	37.18	3.00e-91	327.00
IUUC-Itr-048403	Ictidomys tridecemlineatus	37.57	8.00e-93	333.00
IUUC-Lch-050163	Latimeria chalumnae	40.04	2.00e-98	351.00
IUUC-Lpe-051614	Leersia perrieri	34.97	4.00e-78	284.00
IUUC-Loc-052721	Lepisosteus oculatus	38.41	2.00e-101	361.00
IUUC-Lma-053034	Leptosphaeria maculans	26.21	5.00e-40	157.00
IUUC-Laf-053704	Loxodonta africana	38.17	1.00e-93	336.00
IUUC-Mcc-055688	Macaca mulatta	37.18	2.00e-91	328.00
IUUC-Mor-057275	Magnaporthe oryzae	26.34	5.00e-39	154.00
IUUC-Mpo-057450	Magnaporthe poae	26.78	3.00e-38	152.00
IUUC-Mtr-057970	Medicago truncatula	36.24	4.00e-83	301.00
IUUC-Mla-059172	Melampsora laricipopulina	30.61	3.00e-62	231.00
IUUC-Mvi-060266	Microbotryum violaceum	30.17	1.00e-55	209.00
IUUC-Mmr-061611	Microcebus murinus	38.00	2.00e-92	332.00
IUUC-Mdo-062609	Monodelphis domestica	38.09	5.00e-96	343.00
IUUC-Mmu-064354	Mus musculus	37.18	4.00e-91	327.00
IUUC-Mac-065632	Musa acuminata	34.59	3.00e-77	281.00
IUUC-Mpu-066749	Mustela putorius furo	37.77	8.00e-93	333.00
IUUC-Mlu-067579	Myotis lucifugus	37.77	4.00e-93	334.00
IUUC-Nfi-068556	Neosartorya fischeri	28.34	4.00e-38	151.00
IUUC-Ncr-068877	Neurospora crassa	25.66	6.00e-30	124.00
IUUC-Nle-069176	Nomascus leucogenys	37.60	1.00e-91	329.00
IUUC-Opr-070293	Ochotona princeps	37.57	2.00e-90	325.00
IUUC-Ont-071297	Oreochromis niloticus	39.02	5.00e-102	363.00
IUUC-Oan-073450	Ornithorhynchus anatinus	41.27	2.00e-20	89.70
IUUC-Ocu-074449	Oryctolagus cuniculus	37.57	3.00e-92	331.00
IUUC-Oba-075858	Oryza barthii	34.96	5.00e-78	284.00
IUUC-Obr-076052	Oryza brachyantha	34.46	6.00e-79	287.00
IUUC-Ogl-077756	Oryza glaberrima	35.25	1.00e-80	292.00
IUUC-Ogu-078993	Oryza glumaepatula	34.96	6.00e-78	284.00
IUUC-Oin-079429	Oryza indica	35.05	4.00e-80	291.00
IUUC-Olo-080823	Oryza longistaminata	35.44	4.00e-79	287.00
IUUC-Ome-081852	Oryza meridionalis	35.25	9.00e-81	293.00
IUUC-Oni-082474	Oryza nivara	34.76	2.00e-77	282.00
IUUC-Opu-083450	Oryza punctata	33.20	2.00e-72	265.00
IUUC-Oru-084642	Oryza rufipogon	35.15	3.00e-78	285.00
IUUC-Osa-086011	Oryza sativa	35.25	3.00e-80	291.00
IUUC-Ola-086398	Oryzias latipes	39.39	2.00e-99	355.00
IUUC-Olu-087769	Ostreococcus lucimarinus	33.07	6.00e-63	233.00
IUUC-Oga-088727	Otolemur garnettii	38.10	5.00e-93	333.00
IUUC-Oar-090392	Ovis aries	37.57	9.00e-93	333.00
IUUC-Ptr-090921	Pan troglodytes	37.18	4.00e-91	327.00
IUUC-Pan-092085	Papio anubis	37.25	2.00e-87	315.00
IUUC-Psi-093709	Pelodiscus sinensis	38.41	6.00e-97	347.00
IUUC-Pno-095050	Phaeosphaeria nodorum	24.56	1.00e-38	153.00
IUUC-Ppa-095333	Physcomitrella patens	33.06	3.00e-73	268.00
IUUC-Pfo-097401	Poecilia formosa	39.59	1.00e-97	349.00
IUUC-Pab-097766	Pongo abelii	37.38	9.00e-92	330.00
IUUC-Pop-099011	Populus trichocarpa	35.35	9.00e-78	283.00
IUUC-Pca-100351	Procavia capensis	33.20	8.00e-34	137.00
IUUC-Ppe-101384	Prunus persica	35.45	2.00e-80	291.00
IUUC-Pva-102654	Pteropus vampyrus	37.77	6.00e-93	333.00
IUUC-Pgr-103415	Puccinia graminis	29.76	2.00e-62	232.00
IUUC-Ptt-103925	Puccinia triticina	29.90	6.00e-62	230.00
IUUC-Pte-104394	Pyrenophora teres	25.05	7.00e-38	150.00
IUUC-Pyt-104674	Pyrenophora triticirepentis	24.86	2.00e-38	152.00
IUUC-Rno-105663	Rattus norvegicus	37.57	1.00e-91	329.00
IUUC-Sha-107567	Sarcophilus harrisii	37.50	4.00e-106	377.00
IUUC-Sja-107939	Schizosaccharomyces japonicus	26.11	4.00e-34	138.00
IUUC-Spo-108037	Schizosaccharomyces pombe	23.30	7.00e-27	114.00
IUUC-Ssl-108526	Sclerotinia sclerotiorum	25.05	3.00e-38	151.00
IUUC-Smo-108751	Selaginella moellendorffii	33.53	1.00e-75	276.00
IUUC-Sit-110170	Setaria italica	35.63	2.00e-80	291.00
IUUC-Sly-111518	Solanum lycopersicum	34.91	1.00e-72	266.00
IUUC-Stu-112755	Solanum tuberosum	37.08	7.00e-84	303.00
IUUC-Sar-113590	Sorex araneus	34.24	6.00e-62	230.00
IUUC-Sbi-114091	Sorghum bicolor	35.38	7.00e-81	293.00
IUUC-Sre-115111	Sporisorium reilianum	24.93	5.00e-28	117.00
IUUC-Ssc-115453	Sus scrofa	37.47	8.00e-88	316.00
IUUC-Tgu-117285	Taeniopygia guttata	40.39	9.00e-95	339.00
IUUC-Tru-118474	Takifugu rubripes	39.92	9.00e-100	356.00
IUUC-Tsy-119547	Tarsius syrichta	37.19	1.00e-75	276.00
IUUC-Tni-120818	Tetraodon nigroviridis	40.61	1.00e-100	359.00
IUUC-Tca-121621	Theobroma cacao	34.85	4.00e-79	287.00
IUUC-Tre-122146	Trichoderma reesei	24.91	9.00e-41	160.00
IUUC-Tvi-122353	Trichoderma virens	25.81	9.00e-41	160.00
IUUC-Tae-123385	Triticum aestivum	37.85	4.00e-63	234.00
IUUC-Tur-125971	Triticum urartu	34.75	8.00e-77	279.00
IUUC-Tme-127185	Tuber melanosporum	24.85	2.00e-35	142.00
IUUC-Tbe-127554	Tupaia belangeri	29.97	1.00e-27	116.00
IUUC-Ttr-128995	Tursiops truncatus	37.57	2.00e-92	332.00
IUUC-Uma-129618	Ustilago maydis	23.06	5.00e-24	104.00
IUUC-Vda-129832	Verticillium dahliae	24.39	2.00e-31	129.00
IUUC-Vpa-130592	Vicugna pacos	36.03	7.00e-42	164.00
IUUC-Vvi-131574	Vitis vinifera	34.38	4.00e-78	285.00
IUUC-Xtr-132234	Xenopus tropicalis	40.20	9.00e-97	346.00
IUUC-Xma-133780	Xiphophorus maculatus	39.92	3.00e-97	348.00
IUUC-Yli-134658	Yarrowia lipolytica	29.66	6.00e-09	54.30
IUUC-Zma-135697	Zea mays	34.97	1.00e-79	289.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence