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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018480
UUCD1 version UUC-CaE-00398
Ensembl Protein ID K02B12.3.1
UniProt Accession Q21115; Q21115_CAEEL
Genbank Protein ID CAB00033.2
Protein Name Yeast SEC homolog
Genbank Nucleotide ID BX284601
Gene Name sec-12; CELE_K02B12.3; K02B12.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00010496 K02B12.3.1 K02B12.3.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
miRTarBasemicroRNARAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.30e-07 29.4 147 172
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 8    claf..sd..tllvsGsdDgtikvWD 29
           c++f  s+  +++++G+ Dg i++W+
   Q: 147  CVRFdkSSrgKIFATGGADGHIRIWN 172
           9999994446999************9 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MTIFGGGQSK KAPLIGESGI PAYCLKTIGS RHILVAGGGG ASKTGVLNEI QTHLFTTGSA 60
NQDVGFQSKC VGKFDTGSMA TMNMDVACAF DEISAKYVIA AGQENLCALY MTRAFKLNEE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018480|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGAACACGTG GCTTTCACGA CATTTTTAAT CGAATTTTAT TATTTTATTT CTTTATTTTT 60
TGAAAATTTG CGTAAAAACT GTGTATTTAT CACACAGATG ACAATCTTCG GCGGTGGCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018480|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating
KEGG cel:CELE_K02B12.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000155 Aegilops tauschii 28.62 2.00e-11 62.00
IUUC-Aml-001671 Ailuropoda melanoleuca 24.82 1.00e-18 86.30
IUUC-Ath-006922 Arabidopsis thaliana 25.89 1.00e-08 52.80
IUUC-Ame-010812 Astyanax mexicanus 32.26 3.00e-20 90.50
IUUC-Bta-012386 Bos taurus 23.13 8.00e-19 86.70
IUUC-Bdi-014908 Brachypodium distachyon 28.46 7.00e-11 60.10
IUUC-Bra-016660 Brassica rapa 21.15 8.00e-09 53.50
IUUC-Cja-018998 Callithrix jacchus 24.14 3.00e-20 91.70
IUUC-Cfa-020666 Canis familiaris 23.13 1.00e-17 83.20
IUUC-Cpo-022030 Cavia porcellus 25.60 1.00e-20 92.40
IUUC-Csa-023521 Chlorocebus sabaeus 24.37 2.00e-18 85.10
IUUC-Cin-025431 Ciona intestinalis 26.86 1.00e-17 82.80
IUUC-Dre-027832 Danio rerio 24.89 1.00e-21 96.30
IUUC-Dno-028989 Dasypus novemcinctus 23.22 1.00e-19 89.40
IUUC-Dme-031901 Drosophila melanogaster 30.07 6.00e-30 123.00
IUUC-Ete-032290 Echinops telfairi 23.45 2.00e-18 85.10
IUUC-Eca-033917 Equus caballus 22.80 2.00e-17 82.40
IUUC-Fca-036323 Felis catus 23.45 3.00e-18 85.10
IUUC-Gmo-038693 Gadus morhua 25.17 5.00e-29 120.00
IUUC-Gga-040702 Gallus gallus 24.36 3.00e-20 92.00
IUUC-Gac-042635 Gasterosteus aculeatus 24.95 4.00e-25 107.00
IUUC-Gma-042654 Glycine max 27.10 3.00e-09 55.10
IUUC-Ggo-044648 Gorilla gorilla 23.73 2.00e-18 85.50
IUUC-Hsa-046003 Homo sapiens 23.73 1.00e-18 85.90
IUUC-Itr-048613 Ictidomys tridecemlineatus 23.99 3.00e-20 91.70
IUUC-Lch-049473 Latimeria chalumnae 24.34 2.00e-21 95.50
IUUC-Loc-052177 Lepisosteus oculatus 24.43 1.00e-28 119.00
IUUC-Laf-054366 Loxodonta africana 24.29 2.00e-20 92.00
IUUC-Mcc-055775 Macaca mulatta 23.88 2.00e-18 85.90
IUUC-Meu-056562 Macropus eugenii 21.99 3.00e-13 68.60
IUUC-Mtr-058623 Medicago truncatula 27.36 6.00e-10 57.40
IUUC-Mmr-061126 Microcebus murinus 23.17 9.00e-19 86.70
IUUC-Mdo-062928 Monodelphis domestica 22.63 2.00e-16 79.00
IUUC-Mmu-064083 Mus musculus 24.10 5.00e-19 87.40
IUUC-Mac-064955 Musa acuminata 26.51 5.00e-09 53.90
IUUC-Mpu-066857 Mustela putorius furo 23.64 1.00e-20 92.80
IUUC-Mlu-067891 Myotis lucifugus 23.30 4.00e-18 84.30
IUUC-Nle-070030 Nomascus leucogenys 23.46 2.00e-18 85.90
IUUC-Opr-070864 Ochotona princeps 23.86 6.00e-17 80.50
IUUC-Ont-072204 Oreochromis niloticus 26.81 1.00e-30 126.00
IUUC-Oan-073643 Ornithorhynchus anatinus 21.67 3.00e-11 60.80
IUUC-Ocu-074217 Oryctolagus cuniculus 23.30 5.00e-17 80.90
IUUC-Oba-075153 Oryza barthii 29.21 4.00e-12 64.30
IUUC-Ogl-077345 Oryza glaberrima 28.85 3.00e-11 61.60
IUUC-Ogu-078334 Oryza glumaepatula 28.85 3.00e-11 61.60
IUUC-Oin-079263 Oryza indica 29.21 4.00e-12 64.30
IUUC-Olo-080896 Oryza longistaminata 29.21 3.00e-12 64.70
IUUC-Ome-081986 Oryza meridionalis 28.46 5.00e-11 60.80
IUUC-Oni-082496 Oryza nivara 29.21 1.00e-11 62.80
IUUC-Opu-083902 Oryza punctata 29.06 1.00e-12 66.20
IUUC-Oru-084937 Oryza rufipogon 28.85 6.00e-11 60.50
IUUC-Osa-085881 Oryza sativa 28.46 5.00e-11 60.50
IUUC-Ola-087223 Oryzias latipes 25.06 1.00e-21 96.30
IUUC-Oga-088417 Otolemur garnettii 22.14 5.00e-16 77.40
IUUC-Oar-090435 Ovis aries 23.13 6.00e-19 87.00
IUUC-Ptr-090869 Pan troglodytes 22.60 3.00e-13 68.20
IUUC-Pan-092527 Papio anubis 24.37 2.00e-18 85.10
IUUC-Pma-094156 Petromyzon marinus 25.72 3.00e-23 101.00
IUUC-Ppa-095904 Physcomitrella patens 35.58 7.00e-07 47.00
IUUC-Pfo-097488 Poecilia formosa 25.27 1.00e-28 119.00
IUUC-Pab-097720 Pongo abelii 23.73 2.00e-18 85.50
IUUC-Pop-099307 Populus trichocarpa 27.36 8.00e-09 53.50
IUUC-Pca-100288 Procavia capensis 23.71 1.00e-13 69.70
IUUC-Ppe-101362 Prunus persica 26.07 4.00e-09 54.70
IUUC-Pva-103192 Pteropus vampyrus 23.45 6.00e-19 87.00
IUUC-Rno-106123 Rattus norvegicus 23.74 1.00e-18 86.30
IUUC-Sha-107169 Sarcophilus harrisii 21.38 4.00e-15 74.70
IUUC-Sly-110920 Solanum lycopersicum 25.60 3.00e-10 58.20
IUUC-Stu-112065 Solanum tuberosum 26.00 7.00e-11 60.50
IUUC-Sar-113218 Sorex araneus 23.70 4.00e-12 63.50
IUUC-Ssc-115282 Sus scrofa 24.18 2.00e-21 95.50
IUUC-Tru-117866 Takifugu rubripes 25.94 5.00e-27 114.00
IUUC-Tca-121083 Theobroma cacao 24.74 5.00e-10 57.40
IUUC-Tae-124657 Triticum aestivum 31.15 2.00e-13 68.60
IUUC-Tur-126597 Triticum urartu 29.72 5.00e-10 57.00
IUUC-Ttr-128585 Tursiops truncatus 23.74 3.00e-19 88.20
IUUC-Vvi-131686 Vitis vinifera 26.29 1.00e-09 56.20
IUUC-Xma-134081 Xiphophorus maculatus 25.29 9.00e-28 116.00
Created Date 25-Jun-2017

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