iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042743

UUCD1 version

UUC-GlM-00011

Ensembl Protein ID

GLYMA08G13680.1

UniProt Accession

I1KSU0; I1KSU0_SOYBN

Protein Name

Uncharacterized protein

Gene Name

LOC100795216

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G13680	GLYMA08G13680.1	GLYMA08G13680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1647.3	738	1089

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 785  eleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkvkgav 876
           ++e++e++f+++lD++tfe+++++ l+ +E+++ ++S+++ dD+++yy+v+ta+vlpeene++kgri+vf ved+   kL+ +aek++kgav
   Q: 738  SGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGRIIVFAVEDG---KLQLIAEKETKGAV 826
           6899***********************************************************************...************** PP
   S: 877  idlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardynlewmsave 968
           + l+++Ngkllaain++i+ly+w +++++++el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll+yk++eg++eE+ardyn++wmsave
   Q: 827  YCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 918
           ******************************************************************************************** PP
   S: 969  ilnddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeigvilrlrrellk 1060
           i++ddi+lgaen +Nlf+v+k+ ++g+tdeer +le+vge++lgefv++fr+g+lv++ + +++v+++++vifgt ng+igvi++l++e++ 
   Q: 919  IVDDDIYLGAENSFNLFTVRKN-SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTINGVIGVIASLPHEQYV 1008
           **********************.***********************************98.******************************* PP
   S: 1061 flrnlestlkkvikrvakieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvlyekrwnskkevsveeivKlveelkrlh 1150
           fl++l+s+l+kvik+v++++H+++RsF++ek+t +a++f+dgdLies+lDl+r+k+ +i+k +         +vsvee++K+veel+rlh
   Q: 1009 FLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAV---------DVSVEELCKRVEELTRLH 1089
           ***************************************************************.........9***************98 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTIWNYVVTA HKPTNVTHSC VGNFTSPQDL NLIIAKCTRI EIHLLSPQGL QPMLDVPIYG 60
RIATLELFRP HGEAQDYLFI ATERYKFCVL QWDSETGELV TRAMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATAGAAG AAAATAAGCA GCTCATTCAC TTCACTTTAG CAGACGAGGG CTCGAAGGAG 60
GTGCTTGTTG CGTTGTGGGG CACGCCCTAA GCGGAAGCGG TTAATCACTC TGAACCGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002742	Amborella trichopoda	86.50	0.00e+00	1942.00
IUUC-Acl-008149	Aspergillus clavatus	29.70	2.00e-123	437.00
IUUC-Afl-008549	Aspergillus flavus	30.30	4.00e-124	439.00
IUUC-Afu-009076	Aspergillus fumigatus	29.96	1.00e-133	471.00
IUUC-Ani-009302	Aspergillus nidulans	29.03	3.00e-112	399.00
IUUC-Ang-009636	Aspergillus niger	28.92	4.00e-108	386.00
IUUC-Aor-010073	Aspergillus oryzae	30.46	2.00e-131	463.00
IUUC-Ate-010422	Aspergillus terreus	29.45	6.00e-126	445.00
IUUC-Cel-018239	Caenorhabditis elegans	33.92	3.00e-179	622.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	49.96	0.00e+00	1009.00
IUUC-Cho-024554	Choloepus hoffmanni	47.82	3.00e-134	473.00
IUUC-Cin-025466	Ciona intestinalis	49.05	0.00e+00	1071.00
IUUC-Dre-027448	Danio rerio	51.79	1.00e-162	566.00
IUUC-Dor-030789	Dipodomys ordii	46.33	9.00e-122	431.00
IUUC-Eeu-034900	Erinaceus europaeus	49.67	1.00e-165	577.00
IUUC-Gmo-038815	Gadus morhua	46.94	4.00e-152	532.00
IUUC-Gac-042390	Gasterosteus aculeatus	51.87	0.00e+00	1107.00
IUUC-Lch-050565	Latimeria chalumnae	51.87	0.00e+00	1174.00
IUUC-Loc-052091	Lepisosteus oculatus	47.20	0.00e+00	794.00
IUUC-Lma-053246	Leptosphaeria maculans	28.71	4.00e-126	446.00
IUUC-Mla-059154	Melampsora laricipopulina	26.48	2.00e-91	330.00
IUUC-Nfi-068355	Neosartorya fischeri	29.96	3.00e-128	453.00
IUUC-Ont-071753	Oreochromis niloticus	52.36	0.00e+00	1175.00
IUUC-Oba-075091	Oryza barthii	81.73	0.00e+00	1280.00
IUUC-Olo-080842	Oryza longistaminata	81.26	0.00e+00	1704.00
IUUC-Ola-086881	Oryzias latipes	51.87	0.00e+00	1164.00
IUUC-Olu-087674	Ostreococcus lucimarinus	56.14	0.00e+00	1177.00
IUUC-Pno-094864	Phaeosphaeria nodorum	29.69	1.00e-134	474.00
IUUC-Ppa-095885	Physcomitrella patens	81.55	0.00e+00	1783.00
IUUC-Pfo-096083	Poecilia formosa	52.27	0.00e+00	1176.00
IUUC-Pgr-103659	Puccinia graminis	25.80	5.00e-71	263.00
IUUC-Ptt-103884	Puccinia triticina	22.81	5.00e-60	226.00
IUUC-Pte-104233	Pyrenophora teres	30.55	4.00e-138	486.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	30.64	6.00e-135	475.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.31	3.00e-90	327.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.86	2.00e-119	423.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	28.58	2.00e-112	400.00
IUUC-Sly-111520	Solanum lycopersicum	89.86	0.00e+00	2012.00
IUUC-Sre-114936	Sporisorium reilianum	25.32	7.00e-70	259.00
IUUC-Tru-117593	Takifugu rubripes	51.48	0.00e+00	1156.00
IUUC-Tni-120551	Tetraodon nigroviridis	48.27	0.00e+00	916.00
IUUC-Tur-126451	Triticum urartu	83.23	0.00e+00	1689.00
IUUC-Tme-127057	Tuber melanosporum	30.81	3.00e-125	443.00
IUUC-Vda-129870	Verticillium dahliae	26.14	3.00e-106	380.00
IUUC-Xtr-131987	Xenopus tropicalis	51.70	0.00e+00	1153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence