iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/ZnF/ZnF_A20	ZnF_A20	21618079

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
UBD/ZnF/ZnF_A20	34.10	2.00e-58	223.00	IUUC-Bta-013124
UBD/Alpha-Helix/MIU	34.10	2.00e-58	223.00	IUUC-Bta-013124
E3 activity/A20	41.18	2.00e-34	144.00	IUUC-Dme-031696
UBD/Alpha-Helix/CUE	30.82	1.00e-13	73.20	IUUC-Sce-106460
UBD/Alpha-Helix/CUE	25.37	7.00e-19	89.70	IUUC-Spo-108087

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSDKHGEEDK KAKMHLKAND LLCVNGCGFY GTPQWENRCS KCWRAHQNEM KKCQDFAKNR 60
SLLSFDQFQE RRKSTTESKS RGIKNLFKTS PIPEGGTSSP TSTSPASTPT RRRELSPDSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCAAACAC CCCACAAAGT AATGTCAGAT AAGCATGGCG AGGAGGACAA GAAAGCAAAA 60
ATGCATTTAA AAGCTAATGA TTTAGTGAGT TTTTTCCTAT TTTTAAAATT TCCAATATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR003123--VPS9
IPR002653--Znf_A20

PROSITE

PS51205--VPS9
PS51036--ZF_A20

Pfam

PF02204--VPS9
PF01754--zf-A20

SMART

SM00167--VPS9
SM00259--ZnF_A20

Gene Ontology

GO:0005769--C:early endosome
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0034058--P:endosomal vesicle fusion
GO:0018996--P:molting cycle, collagen and cuticulin-based cuticle
GO:0043547--P:positive regulation of GTPase activity

KEGG

cel:CELE_Y39A1A.5

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000198	Aegilops tauschii	28.64	5.00e-14	71.20
IUUC-Aml-001771	Ailuropoda melanoleuca	35.64	4.00e-49	188.00
IUUC-Atr-003154	Amborella trichopoda	35.06	3.00e-18	85.10
IUUC-Apl-004018	Anas platyrhynchos	33.42	6.00e-56	210.00
IUUC-Aca-004889	Anolis carolinensis	28.71	2.00e-06	46.60
IUUC-Aly-006138	Arabidopsis lyrata	32.68	1.00e-21	96.70
IUUC-Ath-006747	Arabidopsis thaliana	28.03	2.00e-21	95.90
IUUC-Ago-007776	Ashbya gossypii	25.10	3.00e-15	75.10
IUUC-Acl-008235	Aspergillus clavatus	35.67	5.00e-20	92.00
IUUC-Afl-008570	Aspergillus flavus	36.31	2.00e-20	93.20
IUUC-Afu-008815	Aspergillus fumigatus	36.31	3.00e-20	92.40
IUUC-Ani-009381	Aspergillus nidulans	35.67	1.00e-20	94.00
IUUC-Ang-009615	Aspergillus niger	31.33	1.00e-21	96.30
IUUC-Aor-010195	Aspergillus oryzae	36.31	2.00e-20	92.80
IUUC-Ate-010514	Aspergillus terreus	34.39	8.00e-20	90.90
IUUC-Ame-011365	Astyanax mexicanus	33.33	6.00e-51	193.00
IUUC-Bgr-012102	Blumeria graminis	32.69	7.00e-19	88.20
IUUC-Bta-013124	Bos taurus	38.66	5.00e-51	193.00
IUUC-Bci-013943	Botrytis cinerea	32.69	1.00e-18	87.40
IUUC-Bdi-014910	Brachypodium distachyon	29.07	3.00e-21	94.40
IUUC-Bol-015515	Brassica oleracea	34.83	1.00e-22	99.40
IUUC-Bra-017264	Brassica rapa	30.38	1.00e-22	100.00
IUUC-Cja-019941	Callithrix jacchus	37.92	4.00e-49	187.00
IUUC-Cfa-020845	Canis familiaris	39.03	6.00e-51	194.00
IUUC-Cpo-022037	Cavia porcellus	37.94	4.00e-51	194.00
IUUC-Cre-022696	Chlamydomonas reinhardtii	25.42	6.00e-15	74.30
IUUC-Csa-023272	Chlorocebus sabaeus	37.92	6.00e-49	187.00
IUUC-Cho-025076	Choloepus hoffmanni	41.15	2.00e-49	188.00
IUUC-Cin-025400	Ciona intestinalis	36.78	1.00e-64	239.00
IUUC-Csv-025941	Ciona savignyi	37.73	6.00e-53	200.00
IUUC-Cgl-026725	Colletotrichum gloeosporioides	34.42	3.00e-20	92.40
IUUC-Cne-027057	Cryptococcus neoformans	24.22	2.00e-17	82.80
IUUC-Cme-027230	Cyanidioschyzon merolae	61.54	1.00e-06	44.70
IUUC-Dre-028484	Danio rerio	32.93	3.00e-50	191.00
IUUC-Dno-028906	Dasypus novemcinctus	38.66	6.00e-51	193.00
IUUC-Dor-030124	Dipodomys ordii	42.57	1.00e-34	139.00
IUUC-Dse-031437	Dothistroma septosporum	33.97	2.00e-20	93.60
IUUC-Dme-031696	Drosophila melanogaster	30.25	1.00e-40	160.00
IUUC-Ete-032573	Echinops telfairi	39.41	1.00e-48	186.00
IUUC-Eca-033711	Equus caballus	38.66	4.00e-51	194.00
IUUC-Eeu-034847	Erinaceus europaeus	23.90	2.00e-14	73.90
IUUC-Fca-035447	Felis catus	34.36	9.00e-60	223.00
IUUC-Fal-036605	Ficedula albicollis	37.17	5.00e-49	187.00
IUUC-Fox-038024	Fusarium oxysporum	31.90	3.00e-10	59.30
IUUC-Fso-038110	Fusarium solani	34.39	3.00e-20	92.40
IUUC-Gmo-038785	Gadus morhua	33.25	1.00e-58	219.00
IUUC-Ggr-039760	Gaeumannomyces graminis	35.48	9.00e-21	94.40
IUUC-Gga-040584	Gallus gallus	37.17	3.00e-49	187.00
IUUC-Gac-042317	Gasterosteus aculeatus	33.73	5.00e-51	194.00
IUUC-Gma-043940	Glycine max	27.84	1.00e-18	86.30
IUUC-Ggo-044498	Gorilla gorilla	42.95	2.00e-35	142.00
IUUC-Hsa-046625	Homo sapiens	37.92	4.00e-49	187.00
IUUC-Hvu-047155	Hordeum vulgare	34.48	7.00e-20	90.50
IUUC-Itr-048753	Ictidomys tridecemlineatus	38.29	1.00e-50	192.00
IUUC-Kpa-049160	Komagataella pastoris	22.10	6.00e-15	74.70
IUUC-Lch-050529	Latimeria chalumnae	30.32	2.00e-57	215.00
IUUC-Lpe-051344	Leersia perrieri	29.08	7.00e-25	106.00
IUUC-Loc-052644	Lepisosteus oculatus	37.92	3.00e-50	191.00
IUUC-Lma-053102	Leptosphaeria maculans	35.71	5.00e-20	91.70
IUUC-Laf-054337	Loxodonta africana	37.55	2.00e-50	191.00
IUUC-Mcc-055659	Macaca mulatta	38.75	4.00e-41	160.00
IUUC-Meu-056084	Macropus eugenii	52.94	2.00e-23	102.00
IUUC-Mor-057255	Magnaporthe oryzae	35.71	1.00e-21	97.10
IUUC-Mpo-057454	Magnaporthe poae	35.48	9.00e-21	94.00
IUUC-Mtr-058098	Medicago truncatula	27.34	2.00e-20	92.00
IUUC-Mla-059068	Melampsora laricipopulina	28.67	3.00e-14	72.00
IUUC-Mga-059624	Meleagris gallopavo	43.92	8.00e-46	177.00
IUUC-Mvi-060282	Microbotryum violaceum	36.52	1.00e-12	67.40
IUUC-Mmr-061142	Microcebus murinus	34.79	3.00e-59	221.00
IUUC-Mdo-062289	Monodelphis domestica	34.36	1.00e-61	229.00
IUUC-Mmu-063961	Mus musculus	38.29	5.00e-51	194.00
IUUC-Mac-065188	Musa acuminata	35.06	7.00e-19	87.00
IUUC-Mpu-066291	Mustela putorius furo	37.92	3.00e-50	191.00
IUUC-Mlu-067431	Myotis lucifugus	38.29	6.00e-48	183.00
IUUC-Nfi-068422	Neosartorya fischeri	36.31	2.00e-20	92.80
IUUC-Ncr-068843	Neurospora crassa	36.36	1.00e-21	97.40
IUUC-Nle-069079	Nomascus leucogenys	37.92	7.00e-49	186.00
IUUC-Opr-070632	Ochotona princeps	23.90	9.00e-15	75.10
IUUC-Ont-071789	Oreochromis niloticus	33.66	3.00e-58	218.00
IUUC-Oan-072946	Ornithorhynchus anatinus	37.78	1.00e-48	186.00
IUUC-Ocu-073816	Oryctolagus cuniculus	38.29	6.00e-50	191.00
IUUC-Oba-075738	Oryza barthii	31.03	6.00e-12	63.90
IUUC-Obr-076782	Oryza brachyantha	30.29	2.00e-25	108.00
IUUC-Ogl-077592	Oryza glaberrima	28.87	2.00e-25	108.00
IUUC-Ogu-078197	Oryza glumaepatula	29.09	1.00e-23	102.00
IUUC-Oin-079629	Oryza indica	28.87	3.00e-25	107.00
IUUC-Olo-080317	Oryza longistaminata	29.50	2.00e-24	104.00
IUUC-Ome-081419	Oryza meridionalis	28.90	7.00e-24	103.00
IUUC-Oni-082700	Oryza nivara	31.03	6.00e-12	64.30
IUUC-Opu-083923	Oryza punctata	32.84	4.00e-21	94.00
IUUC-Oru-084318	Oryza rufipogon	31.03	6.00e-12	64.30
IUUC-Osa-086246	Oryza sativa	37.29	6.00e-06	40.40
IUUC-Ola-086730	Oryzias latipes	40.74	6.00e-51	193.00
IUUC-Olu-087719	Ostreococcus lucimarinus	45.65	4.00e-16	77.80
IUUC-Oga-088992	Otolemur garnettii	35.22	5.00e-48	184.00
IUUC-Oar-089789	Ovis aries	38.52	2.00e-49	189.00
IUUC-Ptr-091636	Pan troglodytes	37.92	4.00e-49	187.00
IUUC-Pan-092911	Papio anubis	37.92	1.00e-48	186.00
IUUC-Psi-093194	Pelodiscus sinensis	34.42	3.00e-47	181.00
IUUC-Pma-094212	Petromyzon marinus	31.35	1.00e-28	119.00
IUUC-Pno-094831	Phaeosphaeria nodorum	35.71	3.00e-20	92.80
IUUC-Ppa-095705	Physcomitrella patens	30.35	3.00e-24	105.00
IUUC-Pfo-096694	Poecilia formosa	38.83	7.00e-51	193.00
IUUC-Pab-097706	Pongo abelii	37.92	4.00e-49	187.00
IUUC-Pop-099891	Populus trichocarpa	36.78	5.00e-22	97.80
IUUC-Pca-100542	Procavia capensis	24.08	4.00e-12	66.60
IUUC-Ppe-101808	Prunus persica	30.28	1.00e-23	102.00
IUUC-Pva-103225	Pteropus vampyrus	36.32	8.00e-39	153.00
IUUC-Pgr-103564	Puccinia graminis	29.53	4.00e-15	75.50
IUUC-Ptt-103802	Puccinia triticina	32.81	4.00e-15	75.10
IUUC-Pte-104345	Pyrenophora teres	33.97	3.00e-19	89.40
IUUC-Pyt-104716	Pyrenophora triticirepentis	34.62	1.00e-19	90.50
IUUC-Rno-106101	Rattus norvegicus	38.29	9.00e-51	193.00
IUUC-Sce-106460	Saccharomyces cerevisiae	24.54	2.00e-15	75.90
IUUC-Sha-106919	Sarcophilus harrisii	29.72	3.00e-54	205.00
IUUC-Sja-107880	Schizosaccharomyces japonicus	25.58	1.00e-18	86.30
IUUC-Spo-108087	Schizosaccharomyces pombe	24.35	4.00e-20	91.30
IUUC-Ssl-108614	Sclerotinia sclerotiorum	36.21	2.00e-12	66.60
IUUC-Smo-109411	Selaginella moellendorffii	31.61	8.00e-20	90.10
IUUC-Sit-110678	Setaria italica	33.91	1.00e-18	86.70
IUUC-Sly-111526	Solanum lycopersicum	36.05	7.00e-21	94.00
IUUC-Stu-112494	Solanum tuberosum	36.05	2.00e-21	95.90
IUUC-Sar-112929	Sorex araneus	42.86	4.00e-41	161.00
IUUC-Sbi-114242	Sorghum bicolor	34.09	4.00e-19	88.20
IUUC-Sre-115224	Sporisorium reilianum	25.30	5.00e-15	75.90
IUUC-Ssc-115239	Sus scrofa	38.66	3.00e-51	194.00
IUUC-Tgu-117499	Taeniopygia guttata	33.25	6.00e-57	213.00
IUUC-Tru-118027	Takifugu rubripes	39.71	2.00e-52	199.00
IUUC-Tsy-119462	Tarsius syrichta	35.08	2.00e-57	215.00
IUUC-Tni-120855	Tetraodon nigroviridis	34.15	7.00e-60	223.00
IUUC-Tca-121791	Theobroma cacao	25.97	2.00e-21	95.10
IUUC-Tre-122186	Trichoderma reesei	35.71	2.00e-20	92.80
IUUC-Tvi-122541	Trichoderma virens	35.06	7.00e-21	94.40
IUUC-Tae-125011	Triticum aestivum	30.74	6.00e-27	113.00
IUUC-Tur-126572	Triticum urartu	35.06	9.00e-20	90.50
IUUC-Tme-127023	Tuber melanosporum	30.00	2.00e-19	90.10
IUUC-Tbe-127453	Tupaia belangeri	38.66	9.00e-51	193.00
IUUC-Ttr-128526	Tursiops truncatus	38.66	5.00e-51	194.00
IUUC-Uma-129660	Ustilago maydis	24.90	1.00e-15	77.40
IUUC-Vda-129737	Verticillium dahliae	33.77	5.00e-17	81.60
IUUC-Vpa-130505	Vicugna pacos	35.69	2.00e-44	172.00
IUUC-Vvi-131088	Vitis vinifera	36.21	8.00e-20	90.50
IUUC-Xtr-132799	Xenopus tropicalis	32.11	1.00e-47	182.00
IUUC-Xma-133715	Xiphophorus maculatus	35.50	1.00e-60	226.00
IUUC-Yli-134416	Yarrowia lipolytica	31.61	2.00e-18	85.90
IUUC-Zma-135285	Zea mays	29.33	7.00e-25	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence