iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135613

Ensembl Protein ID

Zm00001d011158_T005

UniProt Accession

A0A1D6FXH3; A0A1D6FXH3_MAIZE

Genbank Protein ID

AQK96042.1; AQK96043.1; AQK96046.1

Protein Name

RING/FYVE/PHD-type zinc finger family protein

Genbank Nucleotide ID

CM000784; CM000784; CM000784

Gene Name

ZEAMMB73_Zm00001d011158

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011158	Zm00001d011158_T016	Zm00001d011158_T016
Zm00001d011158	Zm00001d011158_T002	Zm00001d011158_T002
Zm00001d011158	Zm00001d011158_T015	Zm00001d011158_T015
Zm00001d011158	Zm00001d011158_T005	Zm00001d011158_T005
Zm00001d011158	Zm00001d011158_T006	Zm00001d011158_T006
Zm00001d011158	Zm00001d011158_T007	Zm00001d011158_T007
Zm00001d011158	Zm00001d011158_T008	Zm00001d011158_T008
Zm00001d011158	Zm00001d011158_T003	Zm00001d011158_T003
Zm00001d011158	Zm00001d011158_T004	Zm00001d011158_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-08	36.8	1083	1128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C vC   ++d+   + C+ C+e++H  C  +   ++ p+ + w+C++C+
   Q: 1083 CRVCLCDKDDD-LTILCDGCDEAYHIYCITPR-HTSIPKGQ-WYCSSCS 1128
           99998666655.799*****************.*******7.******7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MIDDEESQGI KKVHFRDSFS QHPIVTYKRR RQQKPQTQQQ LRQPPPSLQQ HPEPQLQVKL 60
EPKTEDVPEQ QNNDTFWKSR DMGWKYGIMI DENRQHWKCM YCGLIRYGGG VSRLKRHLAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGGGAAGG AAAGGAAGAG AGGAAGAAAA CGGACGCTCC GAGGGCAAGT GGTGCCGGAT 60
TTTTGTCAGT CTCCTCCCCA CCTAGTCTCT TGTATCCAAT ACAACCTTTG CCTTCATTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003656--Znf_BED
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50808--ZF_BED
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF02892--zf-BED

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000089	Aegilops tauschii	41.84	6.00e-138	484.00
IUUC-Atr-003036	Amborella trichopoda	30.36	2.00e-35	143.00
IUUC-Bdi-014359	Brachypodium distachyon	52.76	0.00e+00	827.00
IUUC-Cel-018182	Caenorhabditis elegans	28.80	2.00e-10	59.70
IUUC-Hvu-047708	Hordeum vulgare	53.58	8.00e-171	593.00
IUUC-Lpe-051599	Leersia perrieri	51.55	0.00e+00	1079.00
IUUC-Oba-075869	Oryza barthii	53.88	0.00e+00	1145.00
IUUC-Obr-076535	Oryza brachyantha	54.76	0.00e+00	1162.00
IUUC-Ogl-077688	Oryza glaberrima	58.01	1.00e-114	405.00
IUUC-Ogu-078065	Oryza glumaepatula	53.97	0.00e+00	1146.00
IUUC-Oin-079589	Oryza indica	52.08	0.00e+00	1082.00
IUUC-Olo-081075	Oryza longistaminata	51.24	0.00e+00	951.00
IUUC-Oni-082357	Oryza nivara	53.71	0.00e+00	1125.00
IUUC-Opu-083175	Oryza punctata	52.97	0.00e+00	1135.00
IUUC-Oru-085009	Oryza rufipogon	53.45	0.00e+00	1092.00
IUUC-Sit-110347	Setaria italica	71.50	0.00e+00	1561.00
IUUC-Sbi-114812	Sorghum bicolor	84.84	0.00e+00	1932.00
IUUC-Tae-125487	Triticum aestivum	50.52	0.00e+00	869.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence