iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099020

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_799028; POPTR_0002s15660g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s15660	POPTR_0002s15660.1	POPTR_0002s15660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-06	28.9	322	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh  C+ kw       + +++CPlC+
   Q: 322  CCICLSAYEDGseLRELPCGHHFHCMCIDKW------LCINATCPLCK 363
           ********88756888***************......**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMPSANSSLT SPQSDAIDSS PLLAHSIANH LLRSRRLLRR PPQLRGAAAR ILRRASSRRM 60
MLREPSVRVR ENAAEQLEER QSDWGYSKPV VVIDVLWSLA IVIIAVGVLG LSLEEKPRVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCCTT CTGCAAATTC TTCACTAACA TCACCACAAT CCGATGCCAT AGACTCATCA 60
CCACTCCTAG CCCATTCAAT TGCCAACCAC CTCCTCCGGA GCCGCCGCCT GTTACGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s15660g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005930	Arabidopsis lyrata	58.75	7.00e-104	370.00
IUUC-Ath-007470	Arabidopsis thaliana	58.20	9.00e-103	366.00
IUUC-Cel-018318	Caenorhabditis elegans	56.52	3.00e-13	69.30
IUUC-Ppe-101951	Prunus persica	64.83	4.00e-104	370.00
IUUC-Tca-121200	Theobroma cacao	62.76	8.00e-120	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence