iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109277

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377620

Gene Name

SELMODRAFT_268628

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_268628	EFJ15990	EFJ15990

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-28	98.7	514	546
UBD/Beta-Prp	1.50e-46	159.6	251	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH++ v+c+++  s+ ++++s+sdD+ti++W l
   Q: 514  GHSGTVNCVSWnpSNpHMFASASDDHTIRIWGL 546
           8***********877899*************97 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++v++l++h+++v+ l+fs++g +l+s+s+d t+ +w++  +  ++   tl+gh+++v+ v+++pd++++ ++++ ++v+lWd +tg++ +t+++   +  
   Q: 251  ETVQVLEAHDNEVWYLQFSRDGRHLASASKDCTAIIWEVVDDDFVRRkhTLAGHHKSVSFVAWSPDDSMILTCGTEEAVKLWDTATGECKHTFQK-ASHGF 350
           7899**************************************9999899*********************************************9.999** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlq 210
           +s ++ ++gk +v+g+ d+    wdl+
   Q: 351  TSCAWFPDGKTFVTGAADKCMYRWDLS 377
           *************************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MKLSSPHQDS RRQHHNLLAP FPLLSPRQSS SLYRSPKPHE SLGMGPPIES QMMGSKKQIR 60
RVEFVRIITQ ALYSLGYSRA AALVEEESGV PLQLPVVSDF RREVLDGRWE ESVATLAKIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCT CCTCGCCTCA CCAAGATTCT CGACGCCAGC ACCATAATCT CTTGGCGCCA 60
TTTCCACTGC TGTCGCCCAG GCAATCCTCG TCGCTCTACC GCTCGCCAAA GCCCCACGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_268628

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024572	Choloepus hoffmanni	40.33	3.00e-55	208.00
IUUC-Cin-025474	Ciona intestinalis	44.77	6.00e-59	219.00
IUUC-Eeu-034468	Erinaceus europaeus	35.86	5.00e-41	161.00
IUUC-Kpa-049141	Komagataella pastoris	29.87	6.00e-59	221.00
IUUC-Pca-100574	Procavia capensis	47.42	2.00e-46	179.00
IUUC-Pgr-103411	Puccinia graminis	41.04	9.00e-33	135.00
IUUC-Sce-106152	Saccharomyces cerevisiae	28.43	2.00e-18	87.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence