iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099739

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

XM_002303921.1; POPTR_0003s19090g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s19090	POPTR_0003s19090.1	POPTR_0003s19090.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	25.27	5.00e-02	32.30	IUUC-Sce-106193

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

NTNNPKKRKE WRVLKEPKLF DESWVFKNSV DPDSRNNESG EELERRVAFN LRTMRSSFSL 60
GDLLEERSRG VSTQLSLYHH DPFEIKKKMK PSDLGNLCRL LVSADLVEKH ILPFLNEDQT 120

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Nucleotide Sequence
(Fasta)

AACACCAATA ATCCTAAGAA AAGAAAAGAA TGTGAATGTC AACAAGCCGA GAGAGAAGTG 60
TTTGCTGGGT CACAGCCAAT TTTCAATGAG CATCCTTTTT GGTTCAAGAA GCCAAAAACA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR003340--B3_DNA-bd
IPR015300--DNA-bd_pseudobarrel

SMART

SM01019--B3

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0003s19090g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011462	Astyanax mexicanus	28.33	2.20e-01	29.30
IUUC-Mga-059448	Meleagris gallopavo	52.38	3.20e+00	26.90
IUUC-Ppa-095762	Physcomitrella patens	29.41	1.00e-06	47.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence