iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006965

UUCD1 version

UUC-ArT-00315

Ensembl Protein ID

AT2G03000.1

UniProt Accession

O80614; O80614_ARATH

Genbank Protein ID

AAC32918.1; AEC05653.1

Protein Name

Putative uncharacterized protein At2g03000; RING/U-box superfamily protein

Genbank Nucleotide ID

AC004138; CP002685

Gene Name

At2g03000; T17M13.17; T17M13_17

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G03000	AT2G03000.1	AT2G03000.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	24.48	5.00e-06	47.40	IUUC-Sce-106136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSDMRDERF FYHRYLSVTN RTTPTTATNL PTSTSNMRST SLMTPRVAHT SMSSGGDFPD 60
DRFFHARHQS ATDRAASNRS RAIMPISTTN VPSSTSNSPR VLQTSMSRRG TSPMSSSTRR 120

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Nucleotide Sequence
(Fasta)

ATGTCCTCGG ATATGCGTGA CGAGCGTTTC TTTTATCATC GATATCTTTC CGTTACAAAT 60
AGAACAACTC CAACTACGGC AACAAACTTG CCAACATCGA CATCGAACAT GCGATCTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G03000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005454	Arabidopsis lyrata	73.13	8.00e-28	115.00
IUUC-Dme-031584	Drosophila melanogaster	46.51	2.00e-09	55.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence