iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007024

UUCD1 version

UUC-ArT-01307

Ensembl Protein ID

AT2G26350.1

UniProt Accession

Q9SYU4; O65895; Q8LBN2; Q8S8Q5; Q9M400; PEX10_ARATH

Genbank Protein ID

AAD18035.1; CAB87983.1; AAC14514.2; AAM14959.1; AEC07828.1; BAC42519.1; AAO63404.1; AAM64667.1

Protein Name

Peroxisome biogenesis factor 10; PER10; Peroxin-10; Peroxisomal biogenesis factor 10; Peroxisome assembly protein 10; Pex10p

Genbank Nucleotide ID

AF119572; AJ276134; AC002505; AC004484; CP002685; AK117879; BT005340; AY087109

Gene Name

PEX10; At2g26350; T9J22.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G26350	AT2G26350.4	AT2G26350.4
AT2G26350	AT2G26350.1	AT2G26350.1
AT2G26350	AT2G26350.5	AT2G26350.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	32.12	2.00e-38	157.00	IUUC-Hsa-046657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Functional Description
(View)

Involved in the formation of peroxisomes, lipid bodies and protein bodies. Required for normal-shaped peroxisomes that can physically associate with the outer membrane of the chloroplast envelope. Not involved in beta-oxidation and glyoxylate cycle. Acts as an E3 ubiquitin-protein ligase.

Protein Sequence
(Fasta)

MRLNGDSGPG QDEPGSSGFH GGIRRFPLAA QPEIMRAAEK DDQYASFIHE ACRDAFRHLF 60
GTRIALAYQK EMKLLGQMLY YVLTTGSGQQ TLGEEYCDII QVAGPYGLSP TPARRALFIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTATTTTT CCTTTGAATT AAAAAAAAAT ATCAAAGGCC GAATAAAAAA CATCATTCGG 60
CAAGTTCATC GATCCACGAA AAAAAAGAAA CGATGAGGCT TAATGGGGAT TCGGGTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0576--Peroxisome
KW-0962--Peroxisome biogenesis
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025654--PEX10
IPR006845--Pex_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF04757--Pex2_Pex12
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005779--C:integral component of peroxisomal membrane
GO:0005778--C:peroxisomal membrane
GO:0005777--C:peroxisome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010381--P:attachment of peroxisome to chloroplast
GO:0009793--P:embryo development ending in seed dormancy
GO:0006635--P:fatty acid beta-oxidation
GO:0007031--P:peroxisome organization
GO:0009853--P:photorespiration
GO:0016558--P:protein import into peroxisome matrix
GO:0006513--P:protein monoubiquitination

KEGG

ath:AT2G26350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002056	Ailuropoda melanoleuca	30.62	2.00e-27	115.00
IUUC-Atr-003000	Amborella trichopoda	59.72	1.00e-118	418.00
IUUC-Apl-003238	Anas platyrhynchos	32.62	3.00e-40	157.00
IUUC-Aly-006189	Arabidopsis lyrata	94.85	0.00e+00	731.00
IUUC-Ago-007728	Ashbya gossypii	26.26	4.00e-22	97.80
IUUC-Acl-008372	Aspergillus clavatus	30.14	4.00e-35	141.00
IUUC-Afl-008450	Aspergillus flavus	31.41	5.00e-36	144.00
IUUC-Afu-009049	Aspergillus fumigatus	30.73	9.00e-35	140.00
IUUC-Ani-009256	Aspergillus nidulans	28.72	2.00e-32	132.00
IUUC-Ang-009867	Aspergillus niger	30.59	8.00e-33	133.00
IUUC-Aor-010008	Aspergillus oryzae	31.41	5.00e-36	144.00
IUUC-Ate-010548	Aspergillus terreus	28.81	2.00e-35	142.00
IUUC-Ame-011719	Astyanax mexicanus	34.01	4.00e-38	151.00
IUUC-Bgr-012234	Blumeria graminis	29.16	9.00e-35	140.00
IUUC-Bci-013613	Botrytis cinerea	32.97	2.00e-16	79.30
IUUC-Bdi-015068	Brachypodium distachyon	62.88	9.00e-127	446.00
IUUC-Bol-016320	Brassica oleracea	88.22	0.00e+00	692.00
IUUC-Bra-018029	Brassica rapa	82.66	1.00e-165	575.00
IUUC-Cja-019237	Callithrix jacchus	30.48	5.00e-28	117.00
IUUC-Cfa-020353	Canis familiaris	28.50	2.00e-12	65.10
IUUC-Cpo-022370	Cavia porcellus	65.38	1.00e-17	82.80
IUUC-Cre-022661	Chlamydomonas reinhardtii	48.81	2.00e-20	91.30
IUUC-Csa-023279	Chlorocebus sabaeus	31.01	5.00e-27	114.00
IUUC-Cgl-026468	Colletotrichum gloeosporioides	67.50	2.00e-14	71.20
IUUC-Cne-026965	Cryptococcus neoformans	25.75	6.00e-15	74.30
IUUC-Cme-027215	Cyanidioschyzon merolae	24.72	5.00e-22	98.20
IUUC-Dre-027835	Danio rerio	32.55	5.00e-39	154.00
IUUC-Dno-029561	Dasypus novemcinctus	32.29	3.00e-29	121.00
IUUC-Dor-030772	Dipodomys ordii	29.69	5.00e-28	117.00
IUUC-Dse-031244	Dothistroma septosporum	27.66	1.00e-36	146.00
IUUC-Dme-031760	Drosophila melanogaster	29.69	1.00e-31	129.00
IUUC-Ete-032976	Echinops telfairi	63.46	6.00e-16	77.40
IUUC-Eca-034245	Equus caballus	31.71	3.00e-32	131.00
IUUC-Eeu-034911	Erinaceus europaeus	28.21	4.00e-26	111.00
IUUC-Fca-035785	Felis catus	27.73	7.00e-27	113.00
IUUC-Fal-036609	Ficedula albicollis	32.81	7.00e-38	150.00
IUUC-Fso-038131	Fusarium solani	36.31	4.00e-17	81.60
IUUC-Gmo-039623	Gadus morhua	32.03	5.00e-37	147.00
IUUC-Ggr-040036	Gaeumannomyces graminis	70.00	2.00e-14	72.80
IUUC-Gga-040589	Gallus gallus	30.79	2.00e-42	165.00
IUUC-Gac-041474	Gasterosteus aculeatus	31.12	4.00e-39	154.00
IUUC-Gma-043204	Glycine max	70.22	2.00e-149	521.00
IUUC-Ggo-044851	Gorilla gorilla	31.20	1.00e-30	126.00
IUUC-Hsa-046657	Homo sapiens	28.85	9.00e-28	116.00
IUUC-Hvu-047776	Hordeum vulgare	71.01	2.00e-34	137.00
IUUC-Itr-048857	Ictidomys tridecemlineatus	30.77	1.00e-30	126.00
IUUC-Lch-049916	Latimeria chalumnae	30.58	3.00e-38	151.00
IUUC-Lpe-051012	Leersia perrieri	60.60	5.00e-123	433.00
IUUC-Loc-051752	Lepisosteus oculatus	31.43	2.00e-38	152.00
IUUC-Lma-053179	Leptosphaeria maculans	30.65	3.00e-37	148.00
IUUC-Laf-053371	Loxodonta africana	30.51	2.00e-35	142.00
IUUC-Mcc-055582	Macaca mulatta	35.52	4.00e-20	91.70
IUUC-Meu-056560	Macropus eugenii	31.48	2.00e-36	145.00
IUUC-Mor-056982	Magnaporthe oryzae	70.00	7.00e-15	74.70
IUUC-Mpo-057519	Magnaporthe poae	70.00	2.00e-14	71.20
IUUC-Mtr-058245	Medicago truncatula	69.95	4.00e-138	483.00
IUUC-Mga-059233	Meleagris gallopavo	31.00	4.00e-39	154.00
IUUC-Mvi-060286	Microbotryum violaceum	32.63	8.00e-35	140.00
IUUC-Mmr-060841	Microcebus murinus	30.53	4.00e-25	107.00
IUUC-Mdo-061896	Monodelphis domestica	32.11	8.00e-38	150.00
IUUC-Mmu-063986	Mus musculus	65.38	2.00e-17	82.40
IUUC-Mac-064785	Musa acuminata	67.20	1.00e-143	501.00
IUUC-Mpu-065978	Mustela putorius furo	29.72	3.00e-28	118.00
IUUC-Mlu-067613	Myotis lucifugus	28.39	4.00e-26	110.00
IUUC-Nfi-068271	Neosartorya fischeri	30.97	1.00e-34	140.00
IUUC-Ncr-068697	Neurospora crassa	29.02	4.00e-27	115.00
IUUC-Nle-069662	Nomascus leucogenys	31.11	3.00e-31	128.00
IUUC-Opr-070595	Ochotona princeps	27.43	8.00e-24	103.00
IUUC-Ont-072321	Oreochromis niloticus	30.43	2.00e-39	155.00
IUUC-Oan-072739	Ornithorhynchus anatinus	28.78	8.00e-30	123.00
IUUC-Oba-075983	Oryza barthii	62.25	8.00e-112	397.00
IUUC-Obr-076297	Oryza brachyantha	61.93	4.00e-125	440.00
IUUC-Ogl-077266	Oryza glaberrima	65.56	9.00e-125	439.00
IUUC-Oin-079246	Oryza indica	65.28	3.00e-124	437.00
IUUC-Oni-082408	Oryza nivara	61.93	3.00e-110	392.00
IUUC-Oru-084691	Oryza rufipogon	60.35	2.00e-106	380.00
IUUC-Osa-085301	Oryza sativa	65.28	3.00e-124	437.00
IUUC-Ola-087206	Oryzias latipes	62.79	5.00e-15	73.90
IUUC-Olu-087804	Ostreococcus lucimarinus	32.95	9.00e-39	153.00
IUUC-Oga-088763	Otolemur garnettii	29.66	1.00e-29	123.00
IUUC-Oar-090235	Ovis aries	59.62	4.00e-15	74.70
IUUC-Ptr-091507	Pan troglodytes	28.85	5.00e-27	114.00
IUUC-Pan-091920	Papio anubis	30.45	5.00e-26	110.00
IUUC-Pno-095101	Phaeosphaeria nodorum	30.54	1.00e-43	169.00
IUUC-Ppa-095462	Physcomitrella patens	48.37	2.00e-79	289.00
IUUC-Pfo-097220	Poecilia formosa	31.36	6.00e-22	97.40
IUUC-Pab-098149	Pongo abelii	30.53	1.00e-27	116.00
IUUC-Pop-098873	Populus trichocarpa	74.11	7.00e-149	519.00
IUUC-Pca-100244	Procavia capensis	65.38	2.00e-16	78.60
IUUC-Ppe-101364	Prunus persica	68.23	9.00e-155	538.00
IUUC-Pgr-103455	Puccinia graminis	30.54	9.00e-21	94.00
IUUC-Pte-104170	Pyrenophora teres	27.64	1.00e-29	123.00
IUUC-Pyt-104531	Pyrenophora triticirepentis	28.91	6.00e-30	124.00
IUUC-Rno-105929	Rattus norvegicus	65.38	3.00e-17	81.60
IUUC-Sce-106361	Saccharomyces cerevisiae	28.02	2.00e-32	132.00
IUUC-Sha-106867	Sarcophilus harrisii	30.86	1.00e-34	139.00
IUUC-Sja-107981	Schizosaccharomyces japonicus	50.00	2.00e-11	62.00
IUUC-Spo-108312	Schizosaccharomyces pombe	50.98	2.00e-12	65.90
IUUC-Ssl-108393	Sclerotinia sclerotiorum	29.08	3.00e-30	125.00
IUUC-Sit-109899	Setaria italica	64.15	1.00e-124	438.00
IUUC-Sly-111809	Solanum lycopersicum	68.34	1.00e-147	514.00
IUUC-Stu-112440	Solanum tuberosum	68.60	8.00e-149	519.00
IUUC-Sbi-114846	Sorghum bicolor	64.93	2.00e-130	457.00
IUUC-Sre-115184	Sporisorium reilianum	28.15	1.00e-34	139.00
IUUC-Ssc-115730	Sus scrofa	30.77	5.00e-39	154.00
IUUC-Tgu-116534	Taeniopygia guttata	33.15	2.00e-40	158.00
IUUC-Tru-118341	Takifugu rubripes	30.28	1.00e-36	145.00
IUUC-Tni-120642	Tetraodon nigroviridis	31.53	5.00e-39	154.00
IUUC-Tca-121102	Theobroma cacao	74.59	8.00e-159	552.00
IUUC-Tre-121931	Trichoderma reesei	35.14	7.00e-23	100.00
IUUC-Tvi-122477	Trichoderma virens	30.83	6.00e-39	154.00
IUUC-Tae-124781	Triticum aestivum	62.33	3.00e-107	381.00
IUUC-Tme-127099	Tuber melanosporum	39.88	4.00e-23	101.00
IUUC-Tbe-128067	Tupaia belangeri	41.07	1.00e-07	50.40
IUUC-Ttr-129156	Tursiops truncatus	28.44	3.00e-19	88.20
IUUC-Uma-129328	Ustilago maydis	27.45	2.00e-30	125.00
IUUC-Vvi-131549	Vitis vinifera	73.85	3.00e-159	553.00
IUUC-Xtr-131788	Xenopus tropicalis	29.60	2.00e-38	151.00
IUUC-Xma-133828	Xiphophorus maculatus	31.74	4.00e-21	94.70
IUUC-Yli-134363	Yarrowia lipolytica	26.06	8.00e-29	120.00
IUUC-Zma-135178	Zea mays	61.70	8.00e-131	459.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence