iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108191

Ensembl Protein ID

SPBC17D1.01.1:pep

UniProt Accession

Q10207; YBX1_SCHPO

Genbank Protein ID

CAA20425.1

Protein Name

Uncharacterized protein C17D1.01

Genbank Nucleotide ID

CU329671

Gene Name

SPBC17D1.01; SPBC17D11.09

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC17D1.01	SPBC17D1.01.1	SPBC17D1.01.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	42.86	4.00e-06	48.10	IUUC-Sce-106453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MKAVYLDYLL RIRYTYVFNL KVSYQSERRT YGATEHFVGC LVPKAWNCLA DDYTDIKTLL 60
DLLFGVTAVI IFACTFKCFT MTEDGLTKLN LEAFLGVSGN TQELLESLGI SAIPDLSNLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTATAAAAC GGAACTTTGG TATACAGCTG GGCAAGACTC TGTTTACAAA ATCTATAGTC 60
ATGTTTCCGA TAAATAAAAA CGCGTAATTC CTGATTTACG CGATGTTCAA ATCCTAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR021386--DUF3020

Pfam

PF11223--DUF3020

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

KEGG

spo:SPBC17D1.01

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002433	Amborella trichopoda	41.03	4.70e-02	30.80
IUUC-Ago-007994	Ashbya gossypii	51.72	1.00e-14	73.90
IUUC-Cfa-020253	Canis familiaris	32.43	1.90e-01	28.50
IUUC-Cho-024611	Choloepus hoffmanni	30.30	1.00e+00	26.90
IUUC-Dre-028617	Danio rerio	38.46	3.30e+00	25.40
IUUC-Kpa-049086	Komagataella pastoris	52.46	2.00e-12	66.20
IUUC-Mpu-066181	Mustela putorius furo	37.84	1.10e-02	32.70
IUUC-Obr-076665	Oryza brachyantha	28.89	8.70e-02	30.00
IUUC-Ogl-077786	Oryza glaberrima	28.89	4.30e-02	31.20
IUUC-Osa-085414	Oryza sativa	28.89	4.90e-02	30.80
IUUC-Ola-086490	Oryzias latipes	41.46	8.90e-02	30.80
IUUC-Sce-106453	Saccharomyces cerevisiae	33.33	3.00e-09	56.20
IUUC-Sja-107872	Schizosaccharomyces japonicus	55.20	2.00e-94	337.00
IUUC-Sit-110096	Setaria italica	31.58	8.20e-02	30.40
IUUC-Sbi-114235	Sorghum bicolor	31.58	7.30e-02	30.40
IUUC-Yli-134513	Yarrowia lipolytica	33.65	6.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence