iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135045

Ensembl Protein ID

Zm00001d039007_T001

UniProt Accession

B4FDU4; B4FDU4_MAIZE

Genbank Protein ID

ACF80287.1; ACG43803.1; AQK88513.1

Protein Name

E3 SUMO-protein ligase MMS21

Genbank Nucleotide ID

BT035282; EU971685; CM000782

Gene Name

ZEAMMB73_Zm00001d039007

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d039007	Zm00001d039007_T003	Zm00001d039007_T003
Zm00001d039007	Zm00001d039007_T002	Zm00001d039007_T002
Zm00001d039007	Zm00001d039007_T001	Zm00001d039007_T001
Zm00001d039007	Zm00001d039007_T004	Zm00001d039007_T004

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	48.75	8.00e-61	230.00	IUUC-Ath-007424
E3 activity/RING/RING	28.12	4.00e-04	39.70	IUUC-Sce-106198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Zea mays

Protein Sequence
(Fasta)

MSSMATKLFN TAEVESSDAQ ALVADMRKAI GTMKSLAVDF ERDGKSDKVK KLEETVLELV 60
ASYEDCAAMA QAIKAVPGVY QSSDQPTDFK TLIGVEASKI REASSASQQN HPLFRQFRES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGGACGTG ACTTCGGAAG ATTGCCGGAG ATGTCGTCGA TGGCCACGAA GCTCTTCAAC 60
ACCGCCGAGG TGGAGTCGTC GGACGCGCAA GCCCTAGTCG CGGTAAAATC CCTCCGCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

KEGG

zma:100192832

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	62.11	2.00e-72	264.00
IUUC-Atr-002438	Amborella trichopoda	50.66	1.00e-59	222.00
IUUC-Apl-004091	Anas platyrhynchos	37.88	1.00e-03	33.90
IUUC-Aca-004433	Anolis carolinensis	35.35	3.00e-08	51.20
IUUC-Aly-006133	Arabidopsis lyrata	48.96	9.00e-66	242.00
IUUC-Ath-007424	Arabidopsis thaliana	48.75	1.00e-65	242.00
IUUC-Ame-010902	Astyanax mexicanus	27.27	1.00e-10	59.30
IUUC-Bgr-012088	Blumeria graminis	29.29	8.00e-03	34.30
IUUC-Bdi-014403	Brachypodium distachyon	59.07	4.00e-81	293.00
IUUC-Bol-015454	Brassica oleracea	49.79	3.00e-68	250.00
IUUC-Bra-017093	Brassica rapa	41.52	1.00e-55	209.00
IUUC-Cel-018588	Caenorhabditis elegans	25.93	5.00e-05	40.40
IUUC-Cin-025127	Ciona intestinalis	19.64	1.00e-06	45.80
IUUC-Cne-026806	Cryptococcus neoformans	23.85	2.00e-05	42.40
IUUC-Cme-027175	Cyanidioschyzon merolae	28.75	7.00e-05	40.80
IUUC-Dre-028325	Danio rerio	30.77	3.00e-06	44.70
IUUC-Dse-031273	Dothistroma septosporum	27.85	3.00e-05	42.70
IUUC-Dme-031933	Drosophila melanogaster	36.11	8.00e-09	53.10
IUUC-Eca-034371	Equus caballus	28.67	3.00e-08	51.60
IUUC-Fal-037038	Ficedula albicollis	38.36	2.00e-07	48.50
IUUC-Fox-037843	Fusarium oxysporum	28.57	1.00e-06	47.00
IUUC-Fso-038272	Fusarium solani	31.82	2.00e-06	46.60
IUUC-Gga-040737	Gallus gallus	38.64	1.20e-02	33.10
IUUC-Gac-042591	Gasterosteus aculeatus	29.27	2.00e-10	58.50
IUUC-Gma-043177	Glycine max	49.36	2.00e-65	241.00
IUUC-Hvu-047252	Hordeum vulgare	61.32	4.00e-79	286.00
IUUC-Lpe-051150	Leersia perrieri	59.02	4.00e-91	327.00
IUUC-Loc-052687	Lepisosteus oculatus	25.13	4.00e-09	54.70
IUUC-Lma-053255	Leptosphaeria maculans	22.14	3.00e-04	39.30
IUUC-Mor-057028	Magnaporthe oryzae	25.64	1.00e-05	43.50
IUUC-Mpo-057462	Magnaporthe poae	30.77	3.00e-03	35.80
IUUC-Mtr-058011	Medicago truncatula	41.98	3.00e-57	214.00
IUUC-Mla-059014	Melampsora laricipopulina	27.19	9.00e-03	33.90
IUUC-Mdo-061863	Monodelphis domestica	23.81	1.00e-05	42.70
IUUC-Mac-065639	Musa acuminata	53.65	2.00e-69	254.00
IUUC-Ncr-068773	Neurospora crassa	27.27	4.00e-05	42.00
IUUC-Ont-071575	Oreochromis niloticus	33.33	1.00e-09	56.20
IUUC-Oan-072777	Ornithorhynchus anatinus	34.15	1.30e-01	26.90
IUUC-Oba-075725	Oryza barthii	57.03	3.00e-78	284.00
IUUC-Obr-076506	Oryza brachyantha	63.09	1.00e-82	298.00
IUUC-Ogl-077564	Oryza glaberrima	65.70	2.00e-62	230.00
IUUC-Ogu-079018	Oryza glumaepatula	57.43	1.00e-78	285.00
IUUC-Oin-079792	Oryza indica	58.78	5.00e-81	293.00
IUUC-Olo-080864	Oryza longistaminata	48.04	2.00e-21	94.00
IUUC-Ome-081426	Oryza meridionalis	66.50	1.00e-77	281.00
IUUC-Oni-082286	Oryza nivara	57.83	2.00e-79	287.00
IUUC-Opu-083586	Oryza punctata	65.48	1.00e-76	278.00
IUUC-Oru-085158	Oryza rufipogon	57.83	2.00e-79	287.00
IUUC-Osa-085872	Oryza sativa	59.57	2.00e-25	107.00
IUUC-Olu-087903	Ostreococcus lucimarinus	45.83	5.00e-06	43.90
IUUC-Psi-093714	Pelodiscus sinensis	36.23	8.00e-06	43.90
IUUC-Pma-094198	Petromyzon marinus	34.29	1.00e-12	64.70
IUUC-Pno-094931	Phaeosphaeria nodorum	26.14	3.00e-05	42.70
IUUC-Ppa-095570	Physcomitrella patens	35.98	1.00e-42	165.00
IUUC-Pop-099559	Populus trichocarpa	55.35	8.00e-72	263.00
IUUC-Ppe-101873	Prunus persica	51.56	2.00e-71	261.00
IUUC-Pte-104390	Pyrenophora teres	25.55	6.00e-09	54.70
IUUC-Pyt-104633	Pyrenophora triticirepentis	23.96	3.00e-06	45.80
IUUC-Sce-106198	Saccharomyces cerevisiae	27.69	6.00e-05	40.80
IUUC-Sja-107983	Schizosaccharomyces japonicus	25.19	1.00e-08	53.10
IUUC-Spo-108327	Schizosaccharomyces pombe	22.83	2.00e-07	48.50
IUUC-Smo-109438	Selaginella moellendorffii	40.00	2.00e-40	158.00
IUUC-Sit-109919	Setaria italica	81.12	6.00e-113	399.00
IUUC-Sly-111667	Solanum lycopersicum	51.07	3.00e-68	251.00
IUUC-Stu-112211	Solanum tuberosum	50.64	6.00e-68	249.00
IUUC-Sbi-113916	Sorghum bicolor	90.13	4.00e-124	436.00
IUUC-Tgu-116472	Taeniopygia guttata	38.36	4.00e-07	47.80
IUUC-Tru-117771	Takifugu rubripes	23.35	2.00e-07	48.90
IUUC-Tni-119821	Tetraodon nigroviridis	27.08	1.00e-09	56.20
IUUC-Tca-121272	Theobroma cacao	52.49	5.00e-65	240.00
IUUC-Tre-122049	Trichoderma reesei	33.85	3.00e-07	49.30
IUUC-Tvi-122642	Trichoderma virens	29.21	7.00e-07	47.80
IUUC-Tae-122969	Triticum aestivum	63.35	3.00e-85	306.00
IUUC-Tur-126346	Triticum urartu	61.58	2.00e-70	257.00
IUUC-Tme-126988	Tuber melanosporum	27.35	6.00e-05	41.20
IUUC-Tbe-127676	Tupaia belangeri	34.62	3.00e-04	37.70
IUUC-Vvi-131486	Vitis vinifera	56.06	7.00e-66	243.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence