iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074468

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02040192

Gene Name

SDK2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000000960.3	ENSOCUT00000000962.3	ENSOCUP00000000832.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	34.62	9.30e-01	32.30	IUUC-Sce-106433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MWRLLIWTLL ALHRIRVAGA QDDVSPYFKT EPVRTQVHLE GNRLVLTCMA EGSWPLEFKW 60
LHNNRELTKF SLEYRYMITS LDRTHAGFYR CIVRNRMGAL LQRQTEVQVA YMGNFEEGEK 120

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Nucleotide Sequence
(Fasta)

ATGTGGCGGC TGCTGATCTG GACGCTGCTG GCTCTGCATC GGATCCGCGT GGCCGGAGCC 60
CAAGGTATGG GGCCGAGCCC CTGTCGGTTG GGGAAGGGGC TGGAGGGGGG CGGCGGTCTC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003961--FN3_dom
IPR007110--Ig-like_dom
IPR013783--Ig-like_fold
IPR013098--Ig_I-set
IPR003599--Ig_sub
IPR003598--Ig_sub2

PROSITE

PS50853--FN3
PS50835--IG_LIKE

Pfam

PF00041--fn3
PF07679--I-set

SMART

SM00060--FN3
SM00409--IG
SM00408--IGc2

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0045202--C:synapse
GO:0060219--P:camera-type eye photoreceptor cell differentiation
GO:0007156--P:homophilic cell adhesion via plasma membrane adhesion molecules
GO:0010842--P:retina layer formation
GO:0007416--P:synapse assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009409	Aspergillus nidulans	31.25	1.70e+00	27.30
IUUC-Cel-018147	Caenorhabditis elegans	23.25	3.00e-37	152.00
IUUC-Cho-024489	Choloepus hoffmanni	30.00	3.00e-03	37.40
IUUC-Dor-030942	Dipodomys ordii	81.23	0.00e+00	1653.00
IUUC-Eeu-034788	Erinaceus europaeus	29.49	2.00e-03	37.70
IUUC-Mmr-060672	Microcebus murinus	24.72	2.00e-46	181.00
IUUC-Mmu-063175	Mus musculus	24.50	9.00e-21	94.70
IUUC-Opr-070239	Ochotona princeps	23.51	1.00e-17	85.50
IUUC-Ont-071861	Oreochromis niloticus	22.78	3.00e-21	99.00
IUUC-Ola-086554	Oryzias latipes	24.69	8.00e-06	45.80
IUUC-Oar-090012	Ovis aries	30.26	2.00e-03	37.70
IUUC-Pan-092262	Papio anubis	30.26	4.00e-03	37.00
IUUC-Pab-097606	Pongo abelii	31.40	6.00e-15	76.60
IUUC-Pva-102837	Pteropus vampyrus	23.66	3.00e-12	67.80
IUUC-Sce-106433	Saccharomyces cerevisiae	34.62	4.10e-02	32.30
IUUC-Ssc-116110	Sus scrofa	33.75	7.00e-04	39.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence