iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099537

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTR_0003s08160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s08160	POPTR_0003s08160.1	POPTR_0003s08160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.3	700	740

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e+ +d p+++pC H ++++Cl  +w     ++  + +CP+Cr
   Q: 700  CPICMESADD-PVLTPCVHRMCRECLiSCW-----QTPISGICPICR 740
           **********.999***********99***.....799999*****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRTRTSTGIR VQTHVRKELA DENVAEVETS DFPEEIDWYL VGGSLITASS TTKGRKLMDN 60
EIVHFGFSSF GSKYHRQGII RFSTKRFGEI GRLPMEWGKS VVPLVSSGKV RVRGRCVAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAACGC GAACAAGCAC CGGGATTCGG GTCCAAACCC ATGTCAGAAA AGAATTGGCT 60
GATGAGAACG TTGCTGAAGT GGAAACCAGT GATTTCCCAG AAGAGATAGA TTGGTACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0003s08160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	58.38	0.00e+00	1092.00
IUUC-Atr-003058	Amborella trichopoda	60.42	0.00e+00	1135.00
IUUC-Aly-005600	Arabidopsis lyrata	69.64	0.00e+00	1328.00
IUUC-Ath-007079	Arabidopsis thaliana	69.16	0.00e+00	1320.00
IUUC-Ago-007997	Ashbya gossypii	31.75	4.00e-103	369.00
IUUC-Ame-011743	Astyanax mexicanus	37.07	4.00e-97	348.00
IUUC-Bci-013741	Botrytis cinerea	33.33	2.00e-131	462.00
IUUC-Bdi-014496	Brachypodium distachyon	57.22	0.00e+00	1065.00
IUUC-Bol-015995	Brassica oleracea	68.14	0.00e+00	1313.00
IUUC-Bra-017004	Brassica rapa	65.17	0.00e+00	1248.00
IUUC-Cho-024891	Choloepus hoffmanni	34.53	4.00e-65	243.00
IUUC-Cne-026886	Cryptococcus neoformans	32.99	5.00e-136	478.00
IUUC-Gma-042857	Glycine max	61.65	0.00e+00	1175.00
IUUC-Hvu-047747	Hordeum vulgare	58.87	0.00e+00	1098.00
IUUC-Lpe-051123	Leersia perrieri	59.83	0.00e+00	1125.00
IUUC-Mtr-058194	Medicago truncatula	61.19	0.00e+00	1129.00
IUUC-Mac-064548	Musa acuminata	56.69	0.00e+00	1059.00
IUUC-Opr-070388	Ochotona princeps	41.50	7.00e-52	198.00
IUUC-Oba-075316	Oryza barthii	57.62	0.00e+00	1082.00
IUUC-Obr-076834	Oryza brachyantha	58.80	0.00e+00	1114.00
IUUC-Ogl-077508	Oryza glaberrima	59.33	0.00e+00	1100.00
IUUC-Ogu-078083	Oryza glumaepatula	57.72	0.00e+00	1102.00
IUUC-Oin-079893	Oryza indica	59.55	0.00e+00	1118.00
IUUC-Olo-080615	Oryza longistaminata	59.76	0.00e+00	1123.00
IUUC-Oni-082773	Oryza nivara	57.93	0.00e+00	1103.00
IUUC-Opu-083675	Oryza punctata	59.44	0.00e+00	1123.00
IUUC-Oru-084543	Oryza rufipogon	57.83	0.00e+00	1100.00
IUUC-Pan-091844	Papio anubis	30.42	4.00e-74	273.00
IUUC-Ppe-102107	Prunus persica	67.85	0.00e+00	1333.00
IUUC-Sce-106396	Saccharomyces cerevisiae	31.65	1.00e-103	370.00
IUUC-Sit-110795	Setaria italica	59.27	0.00e+00	1045.00
IUUC-Sly-111031	Solanum lycopersicum	68.66	0.00e+00	1330.00
IUUC-Stu-112600	Solanum tuberosum	69.30	0.00e+00	1335.00
IUUC-Sbi-114616	Sorghum bicolor	57.89	0.00e+00	1052.00
IUUC-Sre-115131	Sporisorium reilianum	32.88	2.00e-116	414.00
IUUC-Tca-121146	Theobroma cacao	68.95	0.00e+00	1330.00
IUUC-Tae-124792	Triticum aestivum	59.12	0.00e+00	1097.00
IUUC-Tur-125999	Triticum urartu	55.19	0.00e+00	1027.00
IUUC-Vvi-131508	Vitis vinifera	70.19	0.00e+00	1337.00
IUUC-Yli-134588	Yarrowia lipolytica	31.50	1.00e-102	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence