iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Uma-129629

Ensembl Protein ID

KIS72396

UniProt Accession

Q4PGG5; A0A0D1EB15; RAD5_USTMA

Genbank Protein ID

KIS72396.1

Protein Name

DNA repair protein RAD5

Genbank Nucleotide ID

CM003140

Gene Name

RAD5; UMAG_00798

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
UMAG_00798	KIS72396	KIS72396

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.40	2.00e-115	412.00	IUUC-Sce-106396
E3 activity/RING/RING	30.99	7.00e-91	330.00	IUUC-Spo-108026

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ustilago maydis

Functional Description
(View)

Probable helicase, member of the UBC2/RAD6 epistasis group. Functions with DNA repair protein RAD18 in error-free postreplication DNA repair. Involved in the maintenance of wild-type rates of instability of simple repetitive sequences such as poly(GT) repeats. Seems to be involved in maintaining a balance which acts in favor of error-prone non-homologous joining during DNA double-strand breaks repairs (By similarity).

Protein Sequence
(Fasta)

MTTQSSAGPQ SQPSRDFFAS SPSATPGSPS KQASQASKQP DALVTPSSVT ANTSVCADNL 60
LDHHQHEPQH DAASVVIGIE GSINDSAAIH RRRQQPRRAA VQNAKPLFLA EDEDDAINWP 120

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Nucleotide Sequence
(Fasta)

ATGACAACGC AATCGAGCGC CGGTCCACAG TCTCAACCAT CGCGCGATTT CTTTGCTTCG 60
TCACCTTCCG CAACCCCTGG TTCACCCAGC AAACAAGCTT CTCAAGCGTC CAAACAGCCA 120

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Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0227--DNA damage
KW-0234--DNA repair
KW-0238--DNA-binding
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair

KEGG

uma:UMAG_00798

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	33.33	8.00e-115	406.00
IUUC-Atr-003139	Amborella trichopoda	32.80	2.00e-117	415.00
IUUC-Aly-006331	Arabidopsis lyrata	30.42	4.00e-122	431.00
IUUC-Ath-007079	Arabidopsis thaliana	31.11	4.00e-122	431.00
IUUC-Ago-007997	Ashbya gossypii	31.55	5.00e-101	360.00
IUUC-Acl-008022	Aspergillus clavatus	37.34	2.00e-145	508.00
IUUC-Afl-008514	Aspergillus flavus	33.52	2.00e-166	578.00
IUUC-Afu-009055	Aspergillus fumigatus	34.13	1.00e-162	565.00
IUUC-Ani-009340	Aspergillus nidulans	35.21	7.00e-117	413.00
IUUC-Ang-009785	Aspergillus niger	37.24	2.00e-145	508.00
IUUC-Aor-010158	Aspergillus oryzae	33.52	2.00e-166	578.00
IUUC-Ate-010536	Aspergillus terreus	35.40	3.00e-132	464.00
IUUC-Bgr-012147	Blumeria graminis	37.06	1.00e-140	492.00
IUUC-Bci-013741	Botrytis cinerea	33.86	3.00e-158	551.00
IUUC-Bdi-014646	Brachypodium distachyon	32.03	2.00e-116	411.00
IUUC-Bol-015995	Brassica oleracea	33.26	3.00e-117	414.00
IUUC-Bra-016925	Brassica rapa	33.61	2.00e-120	425.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	37.77	7.00e-149	520.00
IUUC-Cne-026886	Cryptococcus neoformans	37.31	0.00e+00	689.00
IUUC-Cme-027110	Cyanidioschyzon merolae	31.33	1.00e-91	329.00
IUUC-Dor-030651	Dipodomys ordii	32.41	2.00e-38	152.00
IUUC-Dse-031471	Dothistroma septosporum	36.87	3.00e-144	504.00
IUUC-Ete-032421	Echinops telfairi	36.24	3.00e-34	139.00
IUUC-Fox-038039	Fusarium oxysporum	41.98	2.00e-95	342.00
IUUC-Fso-038179	Fusarium solani	37.21	1.00e-143	502.00
IUUC-Gmo-038544	Gadus morhua	30.92	3.00e-81	295.00
IUUC-Ggr-039735	Gaeumannomyces graminis	35.06	7.00e-116	410.00
IUUC-Gma-042995	Glycine max	32.44	1.00e-117	416.00
IUUC-Hvu-047747	Hordeum vulgare	33.41	9.00e-114	402.00
IUUC-Kpa-049087	Komagataella pastoris	33.44	4.00e-91	328.00
IUUC-Lpe-051123	Leersia perrieri	34.23	4.00e-120	424.00
IUUC-Lma-052956	Leptosphaeria maculans	39.24	1.00e-92	333.00
IUUC-Mor-057210	Magnaporthe oryzae	33.33	4.00e-113	401.00
IUUC-Mpo-057407	Magnaporthe poae	34.65	2.00e-113	402.00
IUUC-Mtr-058194	Medicago truncatula	33.57	7.00e-110	390.00
IUUC-Mla-058867	Melampsora laricipopulina	35.51	7.00e-97	346.00
IUUC-Mvi-060322	Microbotryum violaceum	38.81	4.00e-121	427.00
IUUC-Nfi-068354	Neosartorya fischeri	34.25	1.00e-162	565.00
IUUC-Ncr-068844	Neurospora crassa	39.69	1.00e-153	535.00
IUUC-Oba-075316	Oryza barthii	30.28	8.00e-115	406.00
IUUC-Obr-076403	Oryza brachyantha	33.98	3.00e-117	414.00
IUUC-Ogl-077573	Oryza glaberrima	32.69	3.00e-119	421.00
IUUC-Ogu-078083	Oryza glumaepatula	30.56	2.00e-118	418.00
IUUC-Oin-079146	Oryza indica	32.69	7.00e-119	420.00
IUUC-Olo-080615	Oryza longistaminata	31.20	8.00e-123	433.00
IUUC-Ome-081448	Oryza meridionalis	31.20	3.00e-105	374.00
IUUC-Oni-082773	Oryza nivara	30.56	8.00e-118	416.00
IUUC-Opu-083675	Oryza punctata	31.33	9.00e-123	433.00
IUUC-Oru-084543	Oryza rufipogon	30.47	1.00e-116	412.00
IUUC-Osa-085686	Oryza sativa	32.57	2.00e-118	417.00
IUUC-Pan-091844	Papio anubis	31.89	3.00e-38	152.00
IUUC-Pno-094916	Phaeosphaeria nodorum	33.36	2.00e-166	578.00
IUUC-Ppa-095877	Physcomitrella patens	33.98	9.00e-119	420.00
IUUC-Pop-099320	Populus trichocarpa	32.25	1.00e-117	416.00
IUUC-Ppe-101820	Prunus persica	34.80	2.00e-97	348.00
IUUC-Pgr-103454	Puccinia graminis	34.65	4.00e-108	385.00
IUUC-Ptt-103829	Puccinia triticina	40.84	3.00e-98	352.00
IUUC-Pte-104242	Pyrenophora teres	37.75	1.00e-149	522.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	36.88	4.00e-148	517.00
IUUC-Sce-106396	Saccharomyces cerevisiae	32.28	8.00e-111	393.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	33.48	2.00e-97	348.00
IUUC-Spo-108026	Schizosaccharomyces pombe	30.31	4.00e-131	461.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	35.17	1.00e-165	575.00
IUUC-Sit-110076	Setaria italica	33.58	3.00e-117	414.00
IUUC-Sly-111031	Solanum lycopersicum	31.24	2.00e-123	435.00
IUUC-Stu-112600	Solanum tuberosum	31.18	1.00e-123	436.00
IUUC-Sbi-113927	Sorghum bicolor	32.98	3.00e-117	414.00
IUUC-Sre-115131	Sporisorium reilianum	73.47	0.00e+00	1794.00
IUUC-Tgu-117188	Taeniopygia guttata	28.37	2.00e-28	120.00
IUUC-Tca-121137	Theobroma cacao	33.89	3.00e-120	424.00
IUUC-Tre-121896	Trichoderma reesei	36.18	2.00e-141	494.00
IUUC-Tvi-122597	Trichoderma virens	37.50	6.00e-148	516.00
IUUC-Tae-123334	Triticum aestivum	33.21	6.00e-118	417.00
IUUC-Tur-125999	Triticum urartu	32.95	5.00e-113	400.00
IUUC-Tme-126953	Tuber melanosporum	33.25	6.00e-114	403.00
IUUC-Tbe-127642	Tupaia belangeri	36.28	2.00e-35	142.00
IUUC-Vda-129849	Verticillium dahliae	36.12	4.00e-133	467.00
IUUC-Vvi-131508	Vitis vinifera	30.87	2.00e-117	415.00
IUUC-Yli-134588	Yarrowia lipolytica	34.09	1.00e-92	332.00
IUUC-Zma-135801	Zea mays	32.24	1.00e-105	376.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence