iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076748

Ensembl Protein ID

OB12G12120.1

UniProt Accession

J3NB54; J3NB54_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G12120	OB12G12120.1	OB12G12120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-25	87.3	257	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++sv +l++  ++ ++++s+s D+ti++WD+rtg++++
   Q: 257  GHSASVEDLQWspTEaDIFASCSVDKTIYIWDIRTGKKPC 296
           8***********66699*******************9886 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGLQKAEAAS SSLPAVPAGP ARVWQPGVDE LEEGEELQFD PEAYNYIRGF NIGWPCLSFD 60
IVRDQLGLVR SEFPHTLYGI AGTQAERAPW NYIGIFKICN INGKKREPIP ASAVDGGSDM 120

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Nucleotide Sequence
(Fasta)

CTCTTCCTTC CGATGGGTCG CAAGGTCAAA TCCAAGAGGA TTAAGAGGAC CGCGCCCAAG 60
GTAAGCGACT AGTGACTGCG TTGTCGCGGT ATTCCTGGTT CAATCTCGTC ATCGTCTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017677	Brassica rapa	73.10	4.00e-77	280.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	40.14	4.00e-73	268.00
IUUC-Csv-025806	Ciona savignyi	49.83	9.00e-79	285.00
IUUC-Cne-026781	Cryptococcus neoformans	38.48	1.00e-80	292.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence