iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132130

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin protein ligase E3 component n-recognin 4

Genbank Nucleotide ID

AAMC01138390

Gene Name

ubr4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020830.4	ENSXETT00000044990.4	ENSXETP00000044990.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	90.28	0.00e+00	2110.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

GELVQIMMAT ANEALSARFC NKVLKFFTKL FQLTEKSPNP SLLRLCGTLA QLACVEPPRL 60
QSWLIRMTAA PPKDSDQSEI VQENRQLLQL LTAYIVRENS QVGEGVCTVL LSTLIPMATD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGAACTGG TGCAGATCAT GATGGCCACT GCAAATGAGG CCCTTTCAGC CAGATTCTGT 60
AACAAAGTCC TGAAGTTCTT TACCAAGCTC TTCCAATTAA GTGAGTATAA AGTATTTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	32.84	3.00e-153	538.00
IUUC-Aml-001346	Ailuropoda melanoleuca	90.28	0.00e+00	2070.00
IUUC-Atr-002587	Amborella trichopoda	32.69	5.00e-159	557.00
IUUC-Apl-003678	Anas platyrhynchos	88.60	0.00e+00	2051.00
IUUC-Aca-004517	Anolis carolinensis	86.56	0.00e+00	892.00
IUUC-Aly-006117	Arabidopsis lyrata	32.01	2.00e-152	535.00
IUUC-Ath-007289	Arabidopsis thaliana	31.29	1.00e-151	533.00
IUUC-Ame-011965	Astyanax mexicanus	83.42	1.00e-176	615.00
IUUC-Bta-012498	Bos taurus	87.74	0.00e+00	2070.00
IUUC-Bdi-014555	Brachypodium distachyon	32.44	4.00e-154	541.00
IUUC-Bol-015522	Brassica oleracea	31.39	6.00e-153	537.00
IUUC-Bra-017090	Brassica rapa	31.22	1.00e-150	529.00
IUUC-Cel-018504	Caenorhabditis elegans	23.45	9.00e-53	203.00
IUUC-Cja-018983	Callithrix jacchus	91.44	0.00e+00	1515.00
IUUC-Cfa-020612	Canis familiaris	88.50	0.00e+00	2073.00
IUUC-Cpo-021700	Cavia porcellus	88.83	0.00e+00	2076.00
IUUC-Csa-023771	Chlorocebus sabaeus	91.69	0.00e+00	1518.00
IUUC-Cho-024474	Choloepus hoffmanni	83.42	0.00e+00	1528.00
IUUC-Cin-025247	Ciona intestinalis	36.99	8.00e-105	374.00
IUUC-Csv-026255	Ciona savignyi	36.40	4.00e-107	382.00
IUUC-Dre-028796	Danio rerio	84.92	0.00e+00	1966.00
IUUC-Dno-030056	Dasypus novemcinctus	88.17	0.00e+00	2067.00
IUUC-Dor-030711	Dipodomys ordii	87.40	0.00e+00	2028.00
IUUC-Dme-032113	Drosophila melanogaster	41.34	0.00e+00	912.00
IUUC-Ete-032334	Echinops telfairi	86.39	0.00e+00	2003.00
IUUC-Eca-033327	Equus caballus	88.59	0.00e+00	2075.00
IUUC-Eeu-034698	Erinaceus europaeus	74.73	9.00e-140	493.00
IUUC-Fca-035430	Felis catus	86.31	0.00e+00	2019.00
IUUC-Fal-037566	Ficedula albicollis	86.49	0.00e+00	2010.00
IUUC-Fso-038424	Fusarium solani	20.43	2.60e-01	29.30
IUUC-Gmo-038674	Gadus morhua	82.46	0.00e+00	1890.00
IUUC-Gga-040641	Gallus gallus	90.78	0.00e+00	2073.00
IUUC-Gac-041870	Gasterosteus aculeatus	83.19	0.00e+00	1959.00
IUUC-Gma-042722	Glycine max	31.55	1.00e-148	523.00
IUUC-Ggo-045360	Gorilla gorilla	88.93	0.00e+00	2078.00
IUUC-Hsa-046955	Homo sapiens	88.84	0.00e+00	2077.00
IUUC-Hvu-047255	Hordeum vulgare	32.74	9.00e-153	536.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	85.33	0.00e+00	631.00
IUUC-Lch-049893	Latimeria chalumnae	86.77	0.00e+00	1445.00
IUUC-Lpe-050948	Leersia perrieri	32.04	2.00e-146	515.00
IUUC-Loc-052019	Lepisosteus oculatus	83.04	0.00e+00	1930.00
IUUC-Laf-054238	Loxodonta africana	88.76	0.00e+00	2076.00
IUUC-Mcc-054905	Macaca mulatta	91.69	0.00e+00	1518.00
IUUC-Meu-056297	Macropus eugenii	83.32	0.00e+00	1908.00
IUUC-Mtr-058169	Medicago truncatula	32.13	1.00e-146	516.00
IUUC-Mga-059621	Meleagris gallopavo	90.69	0.00e+00	2081.00
IUUC-Mmr-061395	Microcebus murinus	92.09	0.00e+00	1398.00
IUUC-Mdo-063037	Monodelphis domestica	91.82	0.00e+00	1521.00
IUUC-Mmu-063200	Mus musculus	90.82	0.00e+00	1509.00
IUUC-Mac-065267	Musa acuminata	29.31	2.00e-129	458.00
IUUC-Mpu-066639	Mustela putorius furo	91.45	0.00e+00	1517.00
IUUC-Mlu-067172	Myotis lucifugus	88.41	0.00e+00	2068.00
IUUC-Nle-069162	Nomascus leucogenys	90.11	0.00e+00	2073.00
IUUC-Opr-070567	Ochotona princeps	83.38	0.00e+00	1343.00
IUUC-Ont-072364	Oreochromis niloticus	85.50	0.00e+00	1404.00
IUUC-Oan-072804	Ornithorhynchus anatinus	83.73	0.00e+00	1789.00
IUUC-Ocu-074637	Oryctolagus cuniculus	88.33	0.00e+00	2083.00
IUUC-Oba-075215	Oryza barthii	32.41	6.00e-145	510.00
IUUC-Obr-076704	Oryza brachyantha	32.44	2.00e-148	522.00
IUUC-Ogl-077593	Oryza glaberrima	32.53	4.00e-145	511.00
IUUC-Ogu-078732	Oryza glumaepatula	32.68	5.00e-146	514.00
IUUC-Oin-079805	Oryza indica	32.62	8.00e-88	320.00
IUUC-Olo-080261	Oryza longistaminata	32.81	2.00e-146	515.00
IUUC-Ome-081392	Oryza meridionalis	32.62	8.00e-146	513.00
IUUC-Oni-082086	Oryza nivara	32.62	9.00e-146	513.00
IUUC-Opu-083535	Oryza punctata	33.06	7.00e-147	516.00
IUUC-Oru-084735	Oryza rufipogon	32.72	5.00e-146	514.00
IUUC-Ola-086799	Oryzias latipes	79.26	0.00e+00	2086.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.52	2.00e-25	112.00
IUUC-Oga-088126	Otolemur garnettii	60.61	0.00e+00	755.00
IUUC-Oar-090428	Ovis aries	87.66	0.00e+00	2068.00
IUUC-Ptr-091407	Pan troglodytes	88.93	0.00e+00	2079.00
IUUC-Pan-091777	Papio anubis	89.14	0.00e+00	2087.00
IUUC-Psi-093587	Pelodiscus sinensis	89.62	0.00e+00	2058.00
IUUC-Ppa-095781	Physcomitrella patens	31.49	3.00e-145	511.00
IUUC-Pfo-097449	Poecilia formosa	83.08	0.00e+00	1950.00
IUUC-Pab-098450	Pongo abelii	87.32	0.00e+00	2025.00
IUUC-Pop-100041	Populus trichocarpa	32.19	5.00e-151	530.00
IUUC-Pca-100663	Procavia capensis	82.93	0.00e+00	957.00
IUUC-Ppe-101386	Prunus persica	32.12	2.00e-151	532.00
IUUC-Pva-102701	Pteropus vampyrus	88.58	0.00e+00	2072.00
IUUC-Rno-105367	Rattus norvegicus	88.24	0.00e+00	2062.00
IUUC-Sce-106175	Saccharomyces cerevisiae	46.34	2.70e-01	31.20
IUUC-Sha-107490	Sarcophilus harrisii	91.82	0.00e+00	1521.00
IUUC-Smo-109103	Selaginella moellendorffii	31.18	5.00e-157	550.00
IUUC-Sit-110670	Setaria italica	31.87	2.00e-151	531.00
IUUC-Sly-110952	Solanum lycopersicum	30.81	3.00e-147	518.00
IUUC-Stu-112624	Solanum tuberosum	30.73	3.00e-145	509.00
IUUC-Sar-113180	Sorex araneus	85.93	0.00e+00	1835.00
IUUC-Sbi-114596	Sorghum bicolor	32.01	8.00e-150	526.00
IUUC-Ssc-115377	Sus scrofa	91.81	0.00e+00	1395.00
IUUC-Tgu-117330	Taeniopygia guttata	92.08	0.00e+00	1543.00
IUUC-Tru-117635	Takifugu rubripes	82.43	0.00e+00	1907.00
IUUC-Tsy-119551	Tarsius syrichta	88.83	0.00e+00	1946.00
IUUC-Tni-119727	Tetraodon nigroviridis	81.83	0.00e+00	1904.00
IUUC-Tca-121017	Theobroma cacao	32.15	6.00e-149	524.00
IUUC-Tur-126292	Triticum urartu	32.93	2.00e-153	539.00
IUUC-Ttr-128332	Tursiops truncatus	90.19	0.00e+00	1491.00
IUUC-Vpa-130615	Vicugna pacos	86.29	3.00e-126	448.00
IUUC-Vvi-131435	Vitis vinifera	31.68	2.00e-144	508.00
IUUC-Xma-133859	Xiphophorus maculatus	85.50	0.00e+00	1399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence