iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108064

Ensembl Protein ID

SPCC550.05.1:pep

UniProt Accession

Q53EK2; NSE1_SCHPO

Genbank Protein ID

CAI84978.1

Protein Name

Non-structural maintenance of chromosomes element 1

Genbank Nucleotide ID

CU329672

Gene Name

nse1; SPCC550.05

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC550.05	SPCC550.05.1	SPCC550.05.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.18	2.00e-18	90.50	IUUC-Hsa-046194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks. Plays a critical role in meiosis.

Protein Sequence
(Fasta)

MEKERQDGLS DKHKFILQYI MCRTAGVDNE QVRELVQEQY GETATVEDVI NELNNSLHNF 60
DFKIKRVQDQ LDGRLTLHFQ NLSGDPVSQM ATPYPPVQIE LMRKIIEWIM KCDDYQYSLT 120

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Nucleotide Sequence
(Fasta)

CTACTACCAA CATATACCAT TACACTGTAT GTTTCATGAT TGTCAATATA TGAACGGACT 60
ATTTTAAGAC AAAAAATCGA AACGACCATA AAAATTTGAT AAAAAATTGA AAGGAAGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0227--DNA damage
KW-0233--DNA recombination
KW-0234--DNA repair
KW-0469--Meiosis
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011513--Nse1
IPR011991--WHTH_DNA-bd_dom

Pfam

PF07574--SMC_Nse1

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0046872--F:metal ion binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0000724--P:double-strand break repair via homologous recombination
GO:0007127--P:meiosis I
GO:0006301--P:postreplication repair

KEGG

spo:SPCC550.05

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000235	Aegilops tauschii	21.74	6.00e-05	39.30
IUUC-Aml-002226	Ailuropoda melanoleuca	28.75	8.00e-21	92.00
IUUC-Atr-003071	Amborella trichopoda	21.70	6.00e-06	42.70
IUUC-Apl-003221	Anas platyrhynchos	25.44	1.00e-16	77.80
IUUC-Aca-004369	Anolis carolinensis	23.01	7.00e-16	75.50
IUUC-Aly-005460	Arabidopsis lyrata	24.27	1.00e-08	51.60
IUUC-Ath-007414	Arabidopsis thaliana	24.18	1.00e-06	45.10
IUUC-Acl-008122	Aspergillus clavatus	23.05	7.00e-14	69.30
IUUC-Afl-008641	Aspergillus flavus	23.34	1.00e-14	71.60
IUUC-Afu-008941	Aspergillus fumigatus	23.43	1.00e-12	64.70
IUUC-Ang-009852	Aspergillus niger	21.53	7.00e-10	56.20
IUUC-Aor-010041	Aspergillus oryzae	23.34	8.00e-15	72.40
IUUC-Ame-011050	Astyanax mexicanus	22.88	3.00e-15	73.60
IUUC-Bgr-012061	Blumeria graminis	27.59	7.00e-15	72.80
IUUC-Bta-012376	Bos taurus	30.00	1.00e-19	87.40
IUUC-Bci-013706	Botrytis cinerea	20.45	4.00e-10	56.60
IUUC-Bdi-014858	Brachypodium distachyon	21.57	5.00e-06	43.10
IUUC-Bol-015509	Brassica oleracea	23.15	4.00e-05	40.00
IUUC-Bra-017956	Brassica rapa	23.15	3.00e-05	40.40
IUUC-Cja-019666	Callithrix jacchus	27.23	3.00e-13	66.60
IUUC-Cfa-020418	Canis familiaris	29.18	2.00e-20	90.90
IUUC-Cpo-022527	Cavia porcellus	27.90	1.00e-17	81.30
IUUC-Csa-023268	Chlorocebus sabaeus	29.18	3.00e-20	90.50
IUUC-Cin-025337	Ciona intestinalis	23.68	6.00e-13	65.90
IUUC-Csv-025935	Ciona savignyi	30.88	9.00e-06	40.40
IUUC-Cgl-026400	Colletotrichum gloeosporioides	24.76	2.00e-13	67.80
IUUC-Cne-027096	Cryptococcus neoformans	26.29	2.00e-13	67.80
IUUC-Dre-028628	Danio rerio	23.68	7.00e-15	72.00
IUUC-Dno-029636	Dasypus novemcinctus	28.33	5.00e-19	85.90
IUUC-Dor-030523	Dipodomys ordii	28.33	3.00e-21	93.20
IUUC-Dse-031163	Dothistroma septosporum	22.43	2.00e-13	68.20
IUUC-Ete-032673	Echinops telfairi	28.14	1.00e-18	84.70
IUUC-Eca-034155	Equus caballus	27.71	2.00e-17	80.50
IUUC-Eeu-034647	Erinaceus europaeus	30.11	1.00e-19	87.80
IUUC-Fca-036073	Felis catus	29.91	8.00e-16	75.10
IUUC-Fal-037212	Ficedula albicollis	23.48	4.00e-15	72.80
IUUC-Fox-037947	Fusarium oxysporum	22.97	1.00e-12	65.10
IUUC-Fso-038221	Fusarium solani	24.17	4.00e-12	63.20
IUUC-Ggr-039809	Gaeumannomyces graminis	22.94	3.00e-08	51.20
IUUC-Gga-040407	Gallus gallus	24.34	2.00e-17	80.10
IUUC-Gma-043783	Glycine max	23.48	7.00e-10	56.20
IUUC-Ggo-044492	Gorilla gorilla	28.76	7.00e-20	89.00
IUUC-Hsa-046194	Homo sapiens	29.18	2.00e-20	90.50
IUUC-Hvu-047237	Hordeum vulgare	21.95	6.00e-06	42.70
IUUC-Itr-048287	Ictidomys tridecemlineatus	26.90	7.00e-18	82.00
IUUC-Kpa-049342	Komagataella pastoris	25.35	3.00e-11	60.10
IUUC-Lch-049840	Latimeria chalumnae	25.21	4.00e-17	79.70
IUUC-Lpe-051000	Leersia perrieri	22.82	2.00e-04	38.10
IUUC-Loc-052108	Lepisosteus oculatus	25.32	5.00e-18	82.40
IUUC-Lma-053012	Leptosphaeria maculans	21.00	3.00e-09	53.90
IUUC-Laf-054200	Loxodonta africana	28.76	3.00e-20	90.10
IUUC-Meu-056409	Macropus eugenii	20.69	1.00e-06	44.30
IUUC-Mor-056929	Magnaporthe oryzae	21.12	1.00e-09	55.10
IUUC-Mpo-057365	Magnaporthe poae	22.22	7.00e-10	55.80
IUUC-Mtr-057860	Medicago truncatula	24.32	1.00e-08	51.60
IUUC-Mla-059092	Melampsora laricipopulina	24.46	5.00e-15	73.20
IUUC-Mga-059471	Meleagris gallopavo	24.12	4.00e-16	76.30
IUUC-Mvi-060458	Microbotryum violaceum	25.33	3.00e-08	50.40
IUUC-Mmr-060817	Microcebus murinus	28.82	2.00e-20	90.50
IUUC-Mdo-062697	Monodelphis domestica	23.14	3.00e-15	73.90
IUUC-Mmu-064233	Mus musculus	28.76	7.00e-21	92.00
IUUC-Mac-065253	Musa acuminata	22.22	1.00e-03	35.80
IUUC-Mpu-066266	Mustela putorius furo	28.94	2.00e-20	90.90
IUUC-Mlu-068073	Myotis lucifugus	27.66	8.00e-19	85.10
IUUC-Nfi-068425	Neosartorya fischeri	22.73	2.00e-12	64.70
IUUC-Ncr-068940	Neurospora crassa	22.18	1.00e-09	55.10
IUUC-Nle-069922	Nomascus leucogenys	29.18	3.00e-20	90.10
IUUC-Ont-071615	Oreochromis niloticus	22.46	7.00e-13	65.50
IUUC-Oan-073522	Ornithorhynchus anatinus	24.62	7.00e-15	71.60
IUUC-Ocu-074543	Oryctolagus cuniculus	27.97	6.00e-20	89.40
IUUC-Obr-076211	Oryza brachyantha	19.91	3.00e-04	37.40
IUUC-Olo-080546	Oryza longistaminata	36.36	1.70e+00	26.20
IUUC-Oga-088199	Otolemur garnettii	28.38	7.00e-20	88.60
IUUC-Oar-089966	Ovis aries	25.21	7.00e-09	52.40
IUUC-Ptr-090997	Pan troglodytes	28.76	7.00e-20	88.60
IUUC-Pan-092860	Papio anubis	29.18	3.00e-20	90.10
IUUC-Psi-093622	Pelodiscus sinensis	24.34	2.00e-15	73.90
IUUC-Pma-094103	Petromyzon marinus	25.21	4.00e-14	69.70
IUUC-Pno-095144	Phaeosphaeria nodorum	19.91	1.00e-09	55.10
IUUC-Pfo-096929	Poecilia formosa	22.51	3.00e-13	66.60
IUUC-Pab-098338	Pongo abelii	26.14	2.00e-13	67.00
IUUC-Pop-099934	Populus trichocarpa	21.54	1.00e-05	42.00
IUUC-Pca-100836	Procavia capensis	23.14	2.00e-12	63.50
IUUC-Ppe-102017	Prunus persica	20.88	4.00e-06	43.50
IUUC-Pva-102220	Pteropus vampyrus	27.75	6.00e-18	82.00
IUUC-Pgr-103577	Puccinia graminis	27.40	4.00e-16	76.60
IUUC-Ptt-103924	Puccinia triticina	29.38	1.00e-13	67.80
IUUC-Pte-104393	Pyrenophora teres	22.84	6.00e-10	56.20
IUUC-Pyt-104539	Pyrenophora triticirepentis	22.45	4.00e-09	53.10
IUUC-Rno-105065	Rattus norvegicus	29.18	7.00e-21	92.00
IUUC-Sce-106408	Saccharomyces cerevisiae	21.76	2.10e-02	31.20
IUUC-Sha-107648	Sarcophilus harrisii	26.05	5.00e-17	79.30
IUUC-Sja-107856	Schizosaccharomyces japonicus	46.88	5.00e-64	234.00
IUUC-Ssl-108419	Sclerotinia sclerotiorum	21.32	1.00e-11	61.60
IUUC-Smo-109269	Selaginella moellendorffii	23.32	1.00e-03	34.70
IUUC-Sit-110804	Setaria italica	21.74	1.00e-07	48.50
IUUC-Sly-111075	Solanum lycopersicum	21.18	2.00e-07	47.80
IUUC-Stu-112619	Solanum tuberosum	19.68	2.00e-06	44.70
IUUC-Sre-115122	Sporisorium reilianum	28.00	1.00e-15	75.50
IUUC-Tgu-117379	Taeniopygia guttata	24.34	5.00e-15	72.40
IUUC-Tru-118342	Takifugu rubripes	23.14	3.00e-15	73.60
IUUC-Tsy-119378	Tarsius syrichta	30.72	1.00e-09	53.50
IUUC-Tni-120275	Tetraodon nigroviridis	24.69	1.00e-15	75.10
IUUC-Tre-121956	Trichoderma reesei	25.62	7.00e-13	65.90
IUUC-Tvi-122418	Trichoderma virens	25.11	4.00e-12	63.20
IUUC-Tae-123908	Triticum aestivum	21.95	1.00e-05	41.60
IUUC-Tur-126685	Triticum urartu	21.86	4.00e-05	40.00
IUUC-Tme-126983	Tuber melanosporum	23.50	1.00e-14	71.60
IUUC-Tbe-127855	Tupaia belangeri	27.57	3.00e-14	69.70
IUUC-Ttr-129282	Tursiops truncatus	27.66	5.00e-19	85.90
IUUC-Uma-129501	Ustilago maydis	26.48	1.00e-15	75.50
IUUC-Vda-129809	Verticillium dahliae	21.37	1.00e-10	57.80
IUUC-Vvi-131264	Vitis vinifera	21.90	4.00e-08	50.10
IUUC-Xtr-131816	Xenopus tropicalis	28.42	3.00e-16	77.00
IUUC-Xma-134145	Xiphophorus maculatus	22.94	6.00e-15	72.40
IUUC-Zma-134965	Zea mays	23.04	6.00e-05	40.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence