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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Sce-106393
UUCD1 version UUC-SaC-00001
Ensembl Protein ID YJR052W
UniProt Accession P06779; D6VWM3; RAD7_YEAST
Genbank Protein ID AAB59347.1; AAA34953.1; AAA62860.1; AAA88755.1; CAA89580.1; DAA08839.1
Protein Name DNA repair protein RAD7
Genbank Nucleotide ID M37696; M13015; L26347; L36344; Z49552; BK006943
Gene Name RAD7; YJR052W; J1665
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YJR052W YJR052W YJR052W
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMUniProtPHOSIDA
BioGRID
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box F-box 17296727; 16675952; 15226437
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description



     Component of the global genome repair (GGR) complex which promotes global genome nucleotide excision repair (GG-NER) which removes DNA damage from nontranscribing DNA. This protein is one of 10 proteins (RAD1, 2,3,4,7,10,14, 16,23 and MMS19) involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents.
Component of the global genome repair (GGR) complex which promotes global genome nucleotide excision repair (GG-NER) which removes DNA damage from nontranscribing DNA. This protein is one of 10 proteins (RAD1, 2,3,4,7,10,14, 16,23 and MMS19) involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents.
Protein Sequence
(Fasta)
MYRSRNRPKR GGENEVKGPN SALTQFLREE GISAENIKQK WYQRQSKKQE DATDEKKGKA 60
EDDSFTAEIS RVVEDEEIDE IGTGSGTETE RAQVSYDARM KLVPADSDEE EYETSHISDT 120
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Protein Fasta Sequence



>IUUC-Sce-106393|E3,F-box|Saccharomyces cerevisiae
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Nucleotide Sequence
(Fasta)
ATGTATCGCA GTAGAAACCG ACCAAAAAGA GGTGGAGAAA ATGAAGTTAA GGGACCAAAT 60
TCTGCCTTGA CTCAATTTTT AAGAGAAGAA GGGATCAGTG CTGAAAATAT CAAACAAAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sce-106393|E3,F-box|Saccharomyces cerevisiae
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0597--Phosphoprotein
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0000113--C:nucleotide-excision repair factor 4 complex
GO:0034613--P:cellular protein localization
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG sce:YJR052W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005409 Arabidopsis lyrata 25.96 4.00e-15 74.70
IUUC-Ago-007886 Ashbya gossypii 50.18 8.00e-133 465.00
IUUC-Acl-008232 Aspergillus clavatus 22.88 3.00e-18 84.30
IUUC-Afl-008657 Aspergillus flavus 23.10 4.00e-18 84.00
IUUC-Afu-008978 Aspergillus fumigatus 22.91 1.00e-15 76.30
IUUC-Ani-009459 Aspergillus nidulans 22.49 1.00e-17 82.40
IUUC-Ang-009710 Aspergillus niger 22.41 4.00e-15 74.30
IUUC-Aor-010179 Aspergillus oryzae 22.91 7.00e-24 103.00
IUUC-Ate-010272 Aspergillus terreus 25.30 2.00e-20 92.00
IUUC-Bgr-012161 Blumeria graminis 22.41 9.00e-19 86.30
IUUC-Cgl-026742 Colletotrichum gloeosporioides 24.21 4.00e-19 87.80
IUUC-Cne-027091 Cryptococcus neoformans 26.95 2.00e-30 125.00
IUUC-Dse-031473 Dothistroma septosporum 24.36 1.00e-14 73.20
IUUC-Dme-032046 Drosophila melanogaster 32.14 1.00e-06 46.60
IUUC-Fox-038004 Fusarium oxysporum 22.44 9.00e-16 76.60
IUUC-Fso-038303 Fusarium solani 21.99 9.00e-15 73.20
IUUC-Kpa-049374 Komagataella pastoris 38.88 7.00e-68 249.00
IUUC-Lma-053024 Leptosphaeria maculans 23.33 1.00e-17 83.20
IUUC-Mor-057127 Magnaporthe oryzae 23.54 5.00e-16 77.40
IUUC-Mpo-057313 Magnaporthe poae 26.60 1.00e-25 108.00
IUUC-Mla-059064 Melampsora laricipopulina 28.54 6.00e-33 133.00
IUUC-Mvi-060420 Microbotryum violaceum 31.05 2.00e-33 135.00
IUUC-Nfi-068453 Neosartorya fischeri 22.56 2.00e-17 82.40
IUUC-Ncr-068686 Neurospora crassa 22.61 1.00e-15 76.30
IUUC-Pno-094844 Phaeosphaeria nodorum 23.06 5.00e-17 80.50
IUUC-Pgr-103407 Puccinia graminis 28.78 3.00e-36 144.00
IUUC-Ptt-103850 Puccinia triticina 25.68 2.00e-31 128.00
IUUC-Pte-104239 Pyrenophora teres 21.85 7.00e-17 80.10
IUUC-Pyt-104683 Pyrenophora triticirepentis 22.99 5.00e-15 74.70
IUUC-Sja-107658 Schizosaccharomyces japonicus 30.73 7.00e-36 143.00
IUUC-Spo-108035 Schizosaccharomyces pombe 28.69 1.00e-46 178.00
IUUC-Ssl-108573 Sclerotinia sclerotiorum 22.34 2.00e-14 72.40
IUUC-Sly-110955 Solanum lycopersicum 24.70 2.00e-07 49.30
IUUC-Stu-112880 Solanum tuberosum 23.49 8.00e-12 64.30
IUUC-Sre-114934 Sporisorium reilianum 30.18 1.00e-46 178.00
IUUC-Tvi-122503 Trichoderma virens 22.68 1.00e-19 89.40
IUUC-Uma-129596 Ustilago maydis 29.09 1.00e-39 155.00
IUUC-Vda-130016 Verticillium dahliae 22.41 6.00e-15 73.60
IUUC-Yli-134667 Yarrowia lipolytica 34.77 3.00e-59 221.00
Created Date 25-Jun-2017

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