iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Dme-032060

Ensembl Protein ID

FBpp0312290

UniProt Accession

Q8IRZ3; D5SHQ4; Q8IRZ3_DROME

Genbank Protein ID

AAN08994.3; ADG03440.1; AHN59952.2; AHN59953.2; ALI51158.1; ALI51159.1

Protein Name

GH16657p; Sperm-specific dynein intermediate chain 3, isoform E; Sperm-specific dynein intermediate chain 3, isoform F; Sperm-specific dynein intermediate chain 3, isoform G

Genbank Nucleotide ID

AE014298; BT124855; AE014298; AE014298; AE014298; AE014298

Gene Name

Sdic3; Sdic4-RA; CG32823; CG46275; CG46276; Dmel_CG32823; Dmel_CG46275; Dmel_CG46276

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0052823	FBtr0346677	FBpp0312290

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-16	59.2	252	277

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlr 31
            +f    + +l++ G++ g+i +WD r
   Q: 252  TCFakfnP-NLILGGTYSGQIVLWDNR 277
           44555343.9***************65 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MGLVLIKFLR STYSTLSGGK KQPLNLSVYN VQATNIPPKE TLVYTKQTQT TSTGGGNGDV 60
LAFDAQGDDE ESSLQNLGNG FTSKLPPGYL THGLPTVKDV APAITPLEIK KETEVKKEVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATTGGAAT CCTGGTTAGA GAGCATTGTA ATCCAAACAC AATTTTTACA ATTTTAGCTT 60
TAGCCGTTTT TTAAATTGAA TAAGCTTAGT ATTACACAGA TTGGACAATG GGCTTAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0007018--P:microtubule-based movement

KEGG

dme:Dmel_CG32823; dme:Dmel_CG46275; dme:Dmel_CG46276

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008509	Aspergillus flavus	36.26	3.00e-77	281.00
IUUC-Ang-009680	Aspergillus niger	38.95	4.00e-79	288.00
IUUC-Aor-010087	Aspergillus oryzae	36.26	3.00e-77	281.00
IUUC-Ate-010443	Aspergillus terreus	37.47	1.00e-76	280.00
IUUC-Bgr-011987	Blumeria graminis	37.86	2.00e-89	322.00
IUUC-Bci-013835	Botrytis cinerea	39.45	4.00e-88	318.00
IUUC-Cgl-026617	Colletotrichum gloeosporioides	37.83	2.00e-79	289.00
IUUC-Ggr-039785	Gaeumannomyces graminis	37.33	5.00e-71	261.00
IUUC-Kpa-049295	Komagataella pastoris	26.15	1.00e-35	143.00
IUUC-Mpo-057521	Magnaporthe poae	37.10	2.00e-71	262.00
IUUC-Ncr-068656	Neurospora crassa	37.61	3.00e-87	315.00
IUUC-Sja-107798	Schizosaccharomyces japonicus	25.97	7.00e-33	134.00
IUUC-Spo-108374	Schizosaccharomyces pombe	29.69	1.00e-46	180.00
IUUC-Ssl-108411	Sclerotinia sclerotiorum	40.14	1.00e-80	293.00
IUUC-Sre-114966	Sporisorium reilianum	42.72	7.00e-91	327.00
IUUC-Tre-122022	Trichoderma reesei	38.30	2.00e-85	309.00
IUUC-Tme-126997	Tuber melanosporum	37.39	1.00e-79	290.00
IUUC-Uma-129615	Ustilago maydis	39.70	9.00e-100	357.00
IUUC-Vda-129769	Verticillium dahliae	31.76	5.00e-22	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence