Disease associated variation - GWASdb |
Chr | Pos | SNP ID(dbSNP 142) | Ref | Alt | Ori SNP ID | P-value | Drug Name | Drug Anno | GWAS Trait | HPO ID | DO ID | AA | Type | Trait or Drug |
7 | 43302784 | rs463 | T | C | rs463 | 5.36E-05 | NICOTINE|BUPROPION | NICOTINIC AGONISTS|ANTIDEPRESSIVE AGENTS, SECOND-GENERATION | Smoking cessation | HPOID:0000707 | DOID:0050742 | T | intron | GWASdb_drug |
7 | 43424112 | rs10246620 | G | A | rs10246620 | 2.87E-04 | ALDOSTERONE | BIOLOGICAL MARKERS|NATRIURETIC PEPTIDE, BRAIN|RENIN | Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption) | HPOID:0011025 | DOID:10763 | G | intron | GWASdb_drug |
7 | 43443210 | rs10238217 | T | C | rs10238217 | 4.82E-04 | ALDOSTERONE | BIOLOGICAL MARKERS|NATRIURETIC PEPTIDE, BRAIN|RENIN | Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption) | HPOID:0011025 | DOID:10763 | T | intron | GWASdb_drug |
7 | 43519337 | rs2304327 | T | C | rs2304327 | 1.81E-05 | CHOLESTEROL | CADHERINS|LIPOPROTEINS|TRIGLYCERIDES|PCDH7 PROTEIN, HUMAN|LIPIDS | Lipid traits | HPOID:0003119 | DOID:3146|DOID:1287|DOID:9970 | A | cds-synon | GWASdb_drug |
7 | 43158219 | rs7787143 | A | C | rs7787143 | 1.79E-04 | | | Body mass index | HPOID:0001507 | DOID:9970 | A | intron | GWASdb_trait |
7 | 43158477 | rs2024125 | G | A | rs2024125 | 5.50E-06 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | T | intron | GWASdb_trait |
7 | 43158477 | rs2024125 | G | A | rs2024125 | 6.00E-06 | | | Obesity-related traits | HPOID:0001513 | DOID:9970 | T | intron | GWASdb_trait |
7 | 43163055 | rs1006106 | C | A | rs1006106 | 2.80E-05 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | T | intron | GWASdb_trait |
7 | 43178373 | rs17641812 | G | A | rs17641812 | 1.21E-04 | | | Body mass index | HPOID:0001507 | DOID:9970 | G | intron | GWASdb_trait |
7 | 43184216 | rs6960763 | C | T | rs6960763 | 2.76E-04 | | | Birth weight | HPOID:0004323 | DOID:783|DOID:9352|DOID:1287 | T | intron | GWASdb_trait |
7 | 43187398 | rs6977397 | G | A | rs6977397 | 3.79E-04 | | | Birth weight | HPOID:0004323 | DOID:783|DOID:9352|DOID:1287 | A | intron | GWASdb_trait |
7 | 43189923 | rs2057745 | T | A | rs2057745 | 1.32E-04 | | | Birth weight | HPOID:0004323 | DOID:783|DOID:9352|DOID:1287 | A | intron | GWASdb_trait |
7 | 43194078 | rs10269585 | C | A | rs10269585 | 1.60E-04 | | | Birth weight | HPOID:0004323 | DOID:783|DOID:9352|DOID:1287 | A | intron | GWASdb_trait |
7 | 43207653 | rs6463169 | C | T | rs6463169 | 4.40E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | T | intron | GWASdb_trait |
7 | 43212606 | rs12674179 | G | T | rs12674179 | 5.68E-05 | | | Cognitive test performance | HPOID:0100543 | DOID:1561 | G | intron | GWASdb_trait |
7 | 43229414 | rs4437556 | C | T | rs4437556 | 2.14E-04 | | | Alzheimer's disease (late onset) | HPOID:0002511 | DOID:10652 | C | intron | GWASdb_trait |
7 | 43230504 | rs17172171 | T | C | rs17172171 | 1.03E-04 | | | Body mass index | HPOID:0001507 | DOID:9970 | T | intron | GWASdb_trait |
7 | 43244022 | rs10229386 | G | T | rs10229386 | 3.39E-05 | | | Cognitive test performance | HPOID:0100543 | DOID:1561 | G | intron | GWASdb_trait |
7 | 43250159 | rs6975782 | G | T | rs6975782 | 9.24E-05 | | | Alzheimer's disease (age of onset) | HPOID:0002511 | DOID:10652 | T | intron | GWASdb_trait |
7 | 43251304 | rs6943440 | G | A | rs6943440 | 9.26E-05 | | | Alzheimer's disease (age of onset) | HPOID:0002511 | DOID:10652 | A | intron | GWASdb_trait |
7 | 43255516 | rs17172174 | G | A | rs17172174 | 9.89E-05 | | | Bipolar disorder, affective | HPOID:0007302 | DOID:3312 | G | intron | GWASdb_trait |
7 | 43276428 | rs2330785 | T | C | rs2330785 | 6.83E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | T | intron | GWASdb_trait |
7 | 43286839 | rs17172185 | T | C | rs17172185 | 4.09E-04 | | | Digestive system disease (Barrett's esophagus and esophageal adenocarcinoma combined) | HPOID:0100580 | DOID:9206|DOID:1107 | C | intron | GWASdb_trait |
7 | 43286839 | rs17172185 | T | C | rs17172185 | 5.00E-06 | | | Esophageal adenocarcinoma | HPOID:0100751 | DOID:1107 | C | intron | GWASdb_trait |
7 | 43286839 | rs17172185 | T | C | rs17172185 | 8.52E-05 | | | Alcoholism | HPOID:0000707 | DOID:0050741 | C | intron | GWASdb_trait |
7 | 43286893 | rs17723330 | G | A | rs17723330 | 6.10E-05 | | | Alcohol dependence | HPOID:0000707 | DOID:0050741 | G | intron | GWASdb_trait |
7 | 43286893 | rs17723330 | G | A | rs17723330 | 6.14E-05 | | | Alcoholism | HPOID:0000707 | DOID:0050741 | G | intron | GWASdb_trait |
7 | 43286908 | rs17796324 | A | G | rs17796324 | 3.16E-05 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | A | intron | GWASdb_trait |
7 | 43289874 | rs2240269 | A | G | rs2240269 | 2.38E-05 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | A | intron | GWASdb_trait |
7 | 43302784 | rs463 | T | C | rs463 | 5.36E-05 | | | Smoking cessation | HPOID:0000707 | DOID:0050742 | T | intron | GWASdb_trait |
7 | 43336243 | rs886550 | G | T | rs886550 | 1.17E-05 | | | Systemic lupus erythematosus | HPOID:0002725 | DOID:9074 | G | intron | GWASdb_trait |
7 | 43365819 | rs2057809 | A | G | rs2057809 | 0.000735989 | | | Hypertension (early onset hypertension) | HPOID:0000822 | DOID:10763 | A | intron | GWASdb_trait |
7 | 43377276 | rs17172199 | A | C | rs17172199 | 1.00E-06 | | | Alzheimer's disease (cognitive decline) | HPOID:0002511 | DOID:10652 | A | intron | GWASdb_trait |
7 | 43377532 | rs10951725 | G | A | rs10951725 | 3.50E-05 | | | Cognitive function | HPOID:0100543 | DOID:1561 | A | intron | GWASdb_trait |
7 | 43384376 | rs6957847 | G | A | rs6957847 | 5.47E-04 | | | Amyotrophic Lateral Sclerosis | HPOID:0007354 | DOID:332 | A | intron | GWASdb_trait |
7 | 43393603 | rs2330791 | A | C | rs2330791 | 4.30E-05 | | | Schizophrenia | HPOID:0100753 | DOID:5419 | C | intron | GWASdb_trait |
7 | 43403369 | rs17172204 | G | A | rs17172204 | 5.41E-04 | | | Acute lung injury | HPOID:0002088 | DOID:850 | G | intron | GWASdb_trait |
7 | 43405968 | rs6980464 | G | T | rs6980464 | 5.83E-04 | | | Acute lung injury | HPOID:0002088 | DOID:850 | G | intron | GWASdb_trait |
7 | 43416129 | rs7811003 | A | G | rs7811003 | 8.23E-05 | | | Serum metabolites | HPOID:0011111 | NA | A | intron | GWASdb_trait |
7 | 43424112 | rs10246620 | G | A | rs10246620 | 2.87E-04 | | | Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption) | HPOID:0011025 | DOID:10763 | G | intron | GWASdb_trait |
7 | 43426306 | rs765865 | A | G | rs765865 | 1.50E-05 | | | Urinary metabolites | HPOID:0000079 | DOID:557 | G | intron | GWASdb_trait |
7 | 43428040 | rs7801372 | T | C | rs7801372 | 4.29E-04 | | | Acute lung injury | HPOID:0002088 | DOID:850 | T | intron | GWASdb_trait |
7 | 43428499 | rs10257003 | T | C | rs10257003 | 1.06E-05 | | | Serum metabolites | HPOID:0011111 | NA | T | intron | GWASdb_trait |
7 | 43433870 | rs10951730 | G | A | rs10951730 | 4.00E-04 | | | Acute lung injury | HPOID:0002088 | DOID:850 | G | intron | GWASdb_trait |
7 | 43433870 | rs10951730 | G | A | rs10951730 | 9.58E-05 | | | Pulmonary function in asthmatics | HPOID:0005952|HPOID:0002099 | DOID:2841 | G | intron | GWASdb_trait |
7 | 43442058 | rs10247622 | A | G | rs10247622 | 8.03E-05 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | A | intron | GWASdb_trait |
7 | 43443210 | rs10238217 | T | C | rs10238217 | 4.82E-04 | | | Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption) | HPOID:0011025 | DOID:10763 | T | intron | GWASdb_trait |
7 | 43460716 | rs2330868 | G | T | rs2330868 | 8.02E-04 | | | Alzheimer's disease | HPOID:0002511 | DOID:10652 | T | intron | GWASdb_trait |
7 | 43463644 | rs7808277 | A | C | rs7808277 | 5.16E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | C | intron | GWASdb_trait |
7 | 43474087 | rs17801421 | A | G | rs17801421 | 2.95E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | A | intron | GWASdb_trait |
7 | 43496138 | rs2304331 | T | C | rs2304331 | 1.10E-04 | | | Multiple complex diseases | HPOID:0000118 | NA | A | intron | GWASdb_trait |
7 | 43506158 | rs2304328 | T | C | rs2304328 | 8.17E-05 | | | Adverse response to chemotherapy (neutropenia/leucopenia) (paclitaxel) | HPOID:0001875|HPOID:0001882 | DOID:1227 | G | cds-synon | GWASdb_trait |
7 | 43519337 | rs2304327 | T | C | rs2304327 | 1.81E-05 | | | Lipid traits | HPOID:0003119 | DOID:3146|DOID:1287|DOID:9970 | A | cds-synon | GWASdb_trait |
7 | 43559539 | rs1025540 | G | T | rs1025540 | 1.12E-04 | | | Alzheimer's disease (late onset) | HPOID:0002511 | DOID:10652 | C | intron | GWASdb_trait |
7 | 43566266 | rs17172223 | G | A | rs17172223 | 9.64E-04 | | | Type 2 diabetes | HPOID:0005978 | DOID:9352 | A | intron | GWASdb_trait |
7 | 43568104 | rs13226386 | G | A | rs13226386 | 4.22E-04 | | | Alcohol dependence | HPOID:0000707 | DOID:0050741 | A | intron | GWASdb_trait |