iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs12879	snp	C/T	0.00159617	0.0282053	utr-variant-3-prime	UPF1	GRCh38.p7	19:18868014	CACCGGGTAGGTTTC[C/T]GCGGTGACCCCGCGG	5976
rs15170	snp	C/T	0	0	utr-variant-3-prime	UPF1	GRCh38.p7	19:18868013	GCACCGGGTAGGTTT[C/T]CGCGGTGACCCCGCG	5976
rs757113	snp	G/T	0.335559	0.234904	intron-variant	UPF1	GRCh38.p7	19:18854146	GCCGTACTGGGAGGG[G/T]TGTTGTTTCTGTGGA	5976
rs757114	snp	A/G	0.189261	0.242509	intron-variant	UPF1	GRCh38.p7	19:18859548	GTGCTCGCTGTAACA[A/G]CAGTGATCCACTTGG	5976
rs757115	snp	C/T	0.361474	0.223771	intron-variant	UPF1	GRCh38.p7	19:18860513	GACCCATTCTACTTA[C/T]TTTTAACATGGGACT	5976
rs886298	snp	C/T	0.187685	0.242109	intron-variant	UPF1	GRCh38.p7	19:18854245	TGCAGGAGCTCCCGG[C/T]GAGGTCCTGGGGCCC	5976
rs997157	snp	A/G	0	0	intron-variant	UPF1	GRCh38.p7	19:18848004	AAGGGTAAATACATT[A/G]AGGCATTCACACACC	5976
rs998284	snp	A/C	0	0	intron-variant	UPF1	GRCh38.p7	19:18847887	TTTCCATAATTTACA[A/C]ACAAATCTGAGCACA	5976
rs1024445	snp	A/G	0.347253	0.230308	intron-variant	UPF1	GRCh38.p7	19:18848287	GTTCACTTGACCGTC[A/G]GCGCTGGGCTTGCCT	5976
rs1024446	snp	A/G	0.499087	0.0213463	intron-variant	UPF1	GRCh38.p7	19:18848400	CCAAGGGGGGAGTTC[A/G]ATGGTCTTGCCCGAG	5976
rs1024447	snp	A/G	0	0	intron-variant	UPF1	GRCh38.p7	19:18848743	TGGTGTTATGAGCAA[A/G]GCCAGAAAGGGGCTG	5976
rs1044693	snp	A/C	0	0	utr-variant-3-prime, downstream-variant-500B	UPF1, GDF1, CERS1	GRCh38.p7	19:18868201	TTAAGTTCTTTTGTC[A/C]CCAAATATTAATAAA	5976
rs1044704	snp	A/T	0	0	missense	UPF1	GRCh38.p7	19:18863506	GGAACCACCTGCTGA[A/T]CTACTATAAGGAGCA	5976
rs1062846	snp	C/T	0.00491398	0.0493238	missense	UPF1	GRCh38.p7	19:18860356	TTTGACTTCCAGTGG[C/T]CCCAACCCGATAAAC	5976
rs1128014	snp	A/G	0	0	missense	UPF1	GRCh38.p7	19:18855236	ACCTGGCCCGGCAAG[A/G]CAACGGGCCGGTGCT	5976
rs1270299	snp	A/C	0	0	intron-variant	UPF1	GRCh38.p7	19:18842526	AGCTTTGGAATTTTT[A/C]AAAATAAGAGGAAAT	5976
rs2005695	snp	A/T	0.211819	0.247067	intron-variant	UPF1	GRCh38.p7	19:18862629	TCACCTGAGGTCAGG[A/T]GTTCTCGACCAGCCT	5976
rs2238652	snp	C/T	0.0490535	0.14873	upstream-variant-2KB	UPF1	GRCh38.p7	19:18831750	ACCACCAAGTCCACA[C/T]CGCCAGCCGCCCGGG	5976
rs2238653	snp	A/G	0.384593	0.210677	intron-variant	UPF1	GRCh38.p7	19:18839836	GTTAGAAGACAGCAC[A/G]TGCCGCCTGGCCAGG	5976
rs2238654	snp	A/G	0.365646	0.221644	intron-variant	UPF1	GRCh38.p7	19:18851252	ATAGGTTGGTGTCGA[A/G]GTCGGCACAGTCAGC	5976
rs2238655	snp	C/T	0.41275	0.189769	intron-variant	UPF1	GRCh38.p7	19:18853633	GAAGTTAATGTATGC[C/T]GCTTGTGTGGCACGT	5976
rs2238656	snp	A/G	0.358728	0.225118	intron-variant	UPF1	GRCh38.p7	19:18853701	GCGCCTTACCTGGAC[A/G]CTGACTCTGCACACG	5976
rs2238657	snp	C/G	0.35894	0.225016	intron-variant	UPF1	GRCh38.p7	19:18863250	ACAAAATCAACCCGT[C/G]TGCAGGGTCAGTGGC	5976
rs2238658	snp	A/G	0.492675	0.0600729	intron-variant	UPF1	GRCh38.p7	19:18863391	GGACCGTCCTGTGAG[A/G]CGGGCAGCTCTCCAC	5976
rs2239371	snp	A/G	0.403334	0.197456	intron-variant	UPF1	GRCh38.p7	19:18833216	GCGGAAGGTTGAGGC[A/G]GAGAAGAATTTTTGC	5976
rs3787045	snp	A/G	0.0741063	0.177655	intron-variant	UPF1	GRCh38.p7	19:18848639	GTCAAAGGCACAGGA[A/G]GGGCTTGTGTCAGCA	5976
rs3787046	snp	A/C			intron-variant	UPF1	GRCh38.p7	19:18844292	CCCCCCCCGGCCCCC[A/C]AAAAAAGCAGCTCCT	5976
rs3787047	snp	A/G	0.333491	0.235646	intron-variant	UPF1	GRCh38.p7	19:18842861	TAGCTGGGATTACAG[A/G]CATGCGCCACCACGC	5976
rs3787048	snp	A/T	0.36606	0.221428	intron-variant	UPF1	GRCh38.p7	19:18842858	CTGGGATTACAGGCA[A/T]GCGCCACCACGCCTA	5976
rs3833293	in-del	-/A	8.33618e-05	0.00645554	intron-variant	UPF1	GRCh38.p7	19:18854736	TGGCAACCAGGGAAC[-/A]GGGGGCAGTGATGGG	5976
rs4808161	snp	C/G	0.183568	0.241012	utr-variant-5-prime	UPF1	GRCh38.p7	19:18832079	GCTGGCGCCGGGGCG[C/G]GCGGTTTGGTCCTTT	5976
rs4808860	snp	A/C	0.00693633	0.0584812	intron-variant	UPF1	GRCh38.p7	19:18844156	TGGTTTTAGTCGTAG[A/C]TAGGTTCACATCCAG	5976
rs4808861	snp	A/G	0.37778	0.214877	intron-variant	UPF1	GRCh38.p7	19:18859923	GCAGGGCAGGGGGAC[A/G]CTGTTGGCTCAACAG	5976
rs5827424	in-del	-/T			intron-variant	UPF1	GRCh38.p7	19:18844491	ATTTTTTTTTTTTTT[-/T]GCCTTTTTAGTAAAA	5976
rs7245456	snp	C/T	0.00755907	0.0610114	intron-variant	UPF1	GRCh38.p7	19:18856820	GTCCCACCTGCCCTC[C/T]GGGGTCTGGTGGCGT	5976
rs7250661	snp	C/T	0.212728	0.247206	intron-variant	UPF1	GRCh38.p7	19:18857849	GGCCTTAACGTGGGC[C/T]GTGCATTCAGTGCTT	5976
rs7251329	snp	A/C	0.171704	0.237423	intron-variant	UPF1	GRCh38.p7	19:18861549	GTGGCTAAAAGAGAA[A/C]AGGCTAGGTGTCATG	5976
rs7252523	snp	C/T	0.188316	0.242271	intron-variant	UPF1	GRCh38.p7	19:18861782	GCAGCGAGCTGAGAT[C/T]GTACCACTGTACTCT	5976
rs7255787	snp	A/G	0.00755907	0.0610114	intron-variant	UPF1	GRCh38.p7	19:18862428	TTGTTTAATCTGAGA[A/G]GCTGTAAGTTTTGGT	5976
rs7257086	snp	C/T	0.183568	0.241012	intron-variant	UPF1	GRCh38.p7	19:18862888	TCACCAGCTGGAAGT[C/T]GGGGGGACCTGGCCT	5976
rs8103462	snp	C/T	0.000733476	0.0191363	synonymous-codon	UPF1	GRCh38.p7	19:18857526	CCTCCAGAATGGTGT[C/T]ACTGCAGGTAACGGG	5976
rs8105827	snp	C/G	0.0162398	0.0886349	upstream-variant-2KB	UPF1	GRCh38.p7	19:18831839	TTGAAAGCCCCACCC[C/G]CTGCGCGTGCGCGGT	5976
rs9917075	snp	C/T	0.00358779	0.0422022	intron-variant	UPF1	GRCh38.p7	19:18832797	GGGTTTGCTCCCCCT[C/T]CTGGGCCCGGGCTGA	5976
rs10405364	snp	A/G	0.181659	0.240478	intron-variant	UPF1	GRCh38.p7	19:18861199	GACTTTGAGAAATAC[A/G]TCACAGGGATCAGAA	5976
rs10410987	snp	C/G	0.212425	0.24716	utr-variant-3-prime	UPF1	GRCh38.p7	19:18867128	TTCCTAAGTTTGTCT[C/G]TAAAATCTTAGCGGT	5976
rs10411147	snp	A/G			intron-variant	UPF1	GRCh38.p7	19:18837388	ccattgagcctggcA[A/G]AAGTGCTGCCTGGAA	5976
rs10412694	snp	G/T	0.0995161	0.199636	intron-variant	UPF1	GRCh38.p7	19:18861925	CGGGTGGGATTTGAG[G/T]GTGGGTCTTGGTGTG	5976
rs10414336	snp	A/C/G	0.00199481	0.0315187	intron-variant	UPF1	GRCh38.p7	19:18849487	AGCAAGGAAGGAGCC[A/C/G]AGCCAGCCAGGGCTT	5976
rs10416469	snp	C/T	0.0818113	0.184966	utr-variant-3-prime	UPF1	GRCh38.p7	19:18867441	TGGCCAGGACTGGCC[C/T]TGTGGCCAGGAGGCG	5976
rs10416612	snp	A/G	0.0984652	0.19884	intron-variant	UPF1	GRCh38.p7	19:18866179	AAGGCAAGCCCCCCT[A/G]GAGCAGGCCTGGCCC	5976
rs10417863	snp	A/G			intron-variant	UPF1	GRCh38.p7	19:18837825	GTCATCTCGTACTGG[A/G]ATTTTACTCTGAGTG	5976
rs10419754	snp	C/G	0.0228947	0.104514	intron-variant	UPF1	GRCh38.p7	19:18847122	CAGGCACTCTTTCCT[C/G]CATCTCAGCTCTTCA	5976
rs10420445	snp	A/T	0.164873	0.23506	intron-variant	UPF1	GRCh38.p7	19:18841717	CAGGCTGTGGGCTCC[A/T]GGGAGAGTGGCTGAT	5976
rs10682791	in-del	-/TT	0	0	intron-variant	UPF1	GRCh38.p7	19:18864755	TTTTTTTTTTTTTTT[-/TT]GGAGACCGAGTCTCG	5976
rs11666657	snp	C/T	0	0	intron-variant	UPF1	GRCh38.p7	19:18864668	cctcaagcagtcctt[C/T]tgctcagcctcccaa	5976
rs11666949	snp	C/T	0.344815	0.231323	intron-variant	UPF1	GRCh38.p7	19:18835313	AACCTGAtcgaggtt[C/T]atccacgctgtggta	5976
rs11667922	snp	C/T	0.0744748	0.178019	intron-variant	UPF1	GRCh38.p7	19:18858780	ACTCTTCTTACTTAG[C/T]TTATTTTTGGAGAAA	5976
rs11669119	snp	C/T	0.0752113	0.178743	intron-variant	UPF1	GRCh38.p7	19:18859971	TTGTAGGGGCTGTGG[C/T]GCCTTTAAGGCAAGC	5976
rs11670952	snp	C/T	0.1652	0.235179	intron-variant	UPF1	GRCh38.p7	19:18836587	CTTGGGGGTAATGGA[C/T]GTTTTTATTATCGTG	5976
rs11673194	snp	A/C	0.212425	0.24716	downstream-variant-500B	UPF1, GDF1, CERS1	GRCh38.p7	19:18868515	GGCGCCCTCCCCACC[A/C]CCCAGGCAAGGAGTC	5976
rs12052113	snp	C/T			upstream-variant-2KB	UPF1	GRCh38.p7	19:18830124	TTTCGGGGGGGGCTC[C/T]TAGCATGCACTAAAC	5976
rs12460303	snp	C/G/T	0.00938946	0.0678717	intron-variant	UPF1	GRCh38.p7	19:18859195	GGGAAAGGCGTGGCT[C/G/T]GGCGCAGGCTCAGAC	5976
rs12460984	snp	A/G	0.000399281	0.0141238	intron-variant	UPF1	GRCh38.p7	19:18854515	AACTAAATTTTAAAA[A/G]CGCTGTTTAAAGAGC	5976
rs12461810	snp	C/T	0	0	intron-variant	UPF1	GRCh38.p7	19:18843565	gctctgtgactcagg[C/T]tggagtgcagtggtg	5976
rs12976276	snp	A/T			synonymous-codon	UPF1	GRCh38.p7	19:18832389	cggtggcggcgcggg[A/T]ggcccgggcggcgcg	5976
rs12976930	snp	A/G			missense	UPF1	GRCh38.p7	19:18832390	ggtggcggcgcggga[A/G]gcccgggcggcgcgg	5976
rs16995752	snp	C/T	0.0360663	0.129354	intron-variant	UPF1	GRCh38.p7	19:18849469	GTGTCCTGGCCACGT[C/T]GCAGCAAGGAAGGAG	5976
rs16995755	snp	C/T	0.00755907	0.0610114	intron-variant	UPF1	GRCh38.p7	19:18852609	ACCACATTTAGGCAA[C/T]GGGAGCCCTGGAGCG	5976
rs17339451	snp	G/T	0	0	missense	UPF1	GRCh38.p7	19:18832414	GGCGCGGGCGCGGGC[G/T]CTGCGGCGGGACAGC	5976
rs28558930	snp	A/C			intron-variant	UPF1	GRCh38.p7	19:18857308	GACTTGTGGGGGCCC[A/C]TGTTCCTACAGCTGA	5976
rs28593000	snp	A/T			utr-variant-3-prime	UPF1	GRCh38.p7	19:18866587	TGGGTAATAAAAAAT[A/T]AAAATAAACGGATAC	5976
rs28611254	snp	A/G			intron-variant	UPF1	GRCh38.p7	19:18842821	CCAGACCAACATGGA[A/G]AAACCCTGTCTCTAC	5976
rs28650812	snp	A/G			intron-variant	UPF1	GRCh38.p7	19:18864923	TTTGTGTTTTTAGTA[A/G]AAACGAGGTTTCGCC	5976
rs34034934	in-del	-/G			intron-variant	UPF1	GRCh38.p7	19:18834644	TTGTTTGTGGGGAAT[-/G]GGGAGTGGTACCCCT	5976
rs34127944	in-del	-/T			upstream-variant-2KB	UPF1	GRCh38.p7	19:18831018	CTTCCCAGGGTCAAG[-/T]CGATCCTCCCACCTC	5976
rs34266994	snp	C/T	1.65935e-05	0.00288036	synonymous-codon	UPF1	GRCh38.p7	19:18856222	GCAGCAGCTGAAAGA[C/T]GAGACTGGGGAGCTG	5976
rs34322276	in-del	-/G			intron-variant	UPF1	GRCh38.p7	19:18833012	CCTCAGTCCCTTTCC[-/G]GGGAGTATCCAGGGT	5976
rs34354340	in-del	-/T			intron-variant	UPF1	GRCh38.p7	19:18841370	AGTATGTAGTATGCA[-/T]TTTCTAGAAGCAGAA	5976
rs34616088	in-del	-/G			intron-variant	UPF1	GRCh38.p7	19:18844311	GCCGGGGGGGGGTTT[-/G]GGGTTTTTCTTTTTT	5976
rs34677724	snp	C/T	0.0696965	0.173178	synonymous-codon	UPF1	GRCh38.p7	19:18856912	CACATGTGTGGGCGC[C/T]GGTGACCCGAGGCTG	5976
rs35135402	in-del	-/T			upstream-variant-2KB	UPF1	GRCh38.p7	19:18831084	ACCACGCTTAGCTAA[-/T]TTTTTTTTTTTTTTT	5976
rs35262201	snp	G/T	0.0123036	0.0774623	intron-variant	UPF1	GRCh38.p7	19:18842846	CTCTACTAAAAATAG[G/T]CGTGGTGGCGCATGT	5976
rs35329917	in-del	-/G			intron-variant	UPF1	GRCh38.p7	19:18840207	GAGACGGAGGACACC[-/G]GGGATCAGGGCTGTG	5976
rs35427308	snp	C/T	0.00478209	0.0486639	synonymous-codon	UPF1	GRCh38.p7	19:18845988	GCTGCAGGTTGGGCC[C/T]GAAGGCATCCTGCAG	5976
rs35496764	in-del	-/T			intron-variant	UPF1	GRCh38.p7	19:18834674	TTGCATCACAAGGGG[-/T]AAGAACGGAATTTGG	5976
rs35934501	in-del	-/T/TT/TTT			intron-variant	UPF1	GRCh38.p7	19:18843518	AAGTGACTTTCTTTG[-/T/TT/TTT]TTTTTTTTTTTTTTT	5976
rs36020300	in-del	-/C			downstream-variant-500B	UPF1, GDF1, CERS1	GRCh38.p7	19:18868507	ACTGAGGGGCGCCCT[-/C]CCCCACCCCCCAGGC	5976
rs36064131	snp	A/G	0.0425331	0.13949	missense	UPF1	GRCh38.p7	19:18850818	CAGGAGCAGCTGCGG[A/G]CACGCCAGATCACGG	5976
rs36102079	in-del	-/C			intron-variant	UPF1	GRCh38.p7	19:18842612	GAGAGGGCTCAGAGA[-/C]CCCTGCAGCTTCTTG	5976
rs45467996	snp	A/G	0.040671	0.13668	intron-variant	UPF1	GRCh38.p7	19:18855350	CACCGAAGAGAGCAC[A/G]TGGCGGGTAGTGTCG	5976
rs45505499	snp	C/T	0.0177636	0.092554	synonymous-codon	UPF1	GRCh38.p7	19:18860385	ACCGATGTTCTTCTA[C/T]GTGACCCAGGGCCAA	5976
rs45559441	snp	C/G			intron-variant	UPF1	GRCh38.p7	19:18861059	CTTTAAGTTACCCCC[C/G]AAGAGGGGCCCGTCC	5976
rs55824320	snp	A/G	0.0995161	0.199636	upstream-variant-2KB	UPF1	GRCh38.p7	19:18831773	CGCCCGGGCGTCCCC[A/G]ATTAGCAGTTGGGGC	5976
rs56273720	in-del	-/G			intron-variant	UPF1	GRCh38.p7	19:18843749	TGTGTGTGTGTGTGT[-/G]TGTTGTTGTTAAGAG	5976
rs56352507	snp	C/T			intron-variant	UPF1	GRCh38.p7	19:18842817	CCAGCCAGACCAACA[C/T]GGAGAAACCCTGTCT	5976
rs57030846	snp	C/G	0.0741063	0.177655	intron-variant	UPF1	GRCh38.p7	19:18837644	CTGTGGGTAGGTACA[C/G]ACCTTTTAGGCAGCA	5976
rs57490498	snp	G/T			intron-variant	UPF1	GRCh38.p7	19:18861484	TTTGAGCACGGCTCA[G/T]GTTCTCTGGGATGAG	5976
rs57677886	snp	G/T	0.0984431	0.198823	utr-variant-3-prime	UPF1	GRCh38.p7	19:18867310	GTAGCCGCCCGCCGA[G/T]CCTGGAAGCTGCTCG	5976
rs57870078	snp	C/G	0.208779	0.246578	intron-variant	UPF1	GRCh38.p7	19:18839251	TGCGCACCACCATGC[C/G]CAACTAATTTTTTTG	5976
rs58103173	snp	A/G	0.0260105	0.111035	intron-variant	UPF1	GRCh38.p7	19:18844788	TCTGTGCCAGGCACT[A/G]TCCCCTACTGCTGTT	5976

Full records

It may take some time, please wait.