DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
ASB4 | hsa-miR-218 | beg:404 | end:415 | pic:3' TGTACCAATCTAGTTCGTGTT 5'& .||||||| &5' ------------TAAGCACA- 3' |
ASB4 | hsa-miR-196a | beg:22 | end:41 | pic:3' GGGTTGTTGTACTTTGATGGAT 5'& || . .| |||||||| &5' CCTGG--GCT---AACTACCT- 3' |
ASB4 | hsa-miR-328 | beg:319 | end:337 | pic:3' TGCCTTCCCGT--CTCTCCCGGTC 5'& || || ||||||| &5' --------GCCATGAAAGGGCCA- 3' |
ASB4 | hsa-miR-380 | beg:50 | end:69 | pic:3' TTCTACACCTGGTA--TAATGTAT 5'& |||| |||||||| &5' --------GACCTTCCATTACATA 3' |
ASB4 | hsa-miR-583 | beg:34 | end:54 | pic:3' CATTACCCTGGA----AGGAGAAAC 5'& |||| ||||||||| &5' --------ACCTCTGATCCTCTTTG 3' |
ASB4 | hsa-let-7g | beg:24 | end:42 | pic:3' TTGACATGTTTGA-TGATGGAGT 5'& . .|| |||||||| &5' -------TGGGCTAACTACCTC- 3' |
ASB4 | hsa-let-7i | beg:24 | end:42 | pic:3' TTGTCGTGTTTGA-TGATGGAGT 5'& . .|| |||||||| &5' -------TGGGCTAACTACCTC- 3' |
ASB4 | hsa-let-7a | beg:26 | end:42 | pic:3' TTGATATGTTGGATGATGGAGT 5'& ..|. |||||||| &5' --------GGCTAACTACCTC- 3' |
ASB4 | hsa-miR-98 | beg:26 | end:42 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& ..|| |||||||| &5' --------GGCTAACTACCTC- 3' |
ASB4 | hsa-let-7d | beg:26 | end:43 | pic:3' TTGATACGTTGGATGATGGAGA 5'& ..|. ||||||||| &5' --------GGCTAACTACCTCT 3' |
ASB4 | hsa-let-7e | beg:26 | end:50 | pic:3' TTGATATGTTGGAGGAT-GGAGT 5'& ..||| || |||||. |||| &5' GGCTA-ACTACCTCTGATCCTC- 3' |
ASB4 | ebv-miR-BART1-5p | beg:356 | end:376 | pic:3' GTGTCGTGCAGTGAAGGTGATTCT 5'& ||| || |..|.|||| &5' ---AGCTA---ACGTTTATTAAG- 3' |
ASB4 | ebv-miR-BART17-3p | beg:243 | end:256 | pic:3' TGATTCCCCTGTGGTCCGTATGT 5'& |||||||||| &5' -------------CAGGCATACA 3' |
ASB4 | ebv-miR-BART17-5p | beg:35 | end:52 | pic:3' GAACATACGGACGC-AGGAGAAT 5'& ||| .| ||||||| &5' --------CCTCTGATCCTCTT- 3' |
ASB4 | ebv-miR-BART20-5p | beg:287 | end:306 | pic:3' CCTTACTTCTGTA-CGGACGAT 5'& || ||| ||||||| &5' -----GATGACTCAGCCTGCT- 3' |
ASB4 | ebv-miR-BART3 | beg:176 | end:197 | pic:3' TGTGGACCAC-TGATCACCACGC 5'& ||||| ||| |||.|||| &5' ACACCA-GTGCACTGGTGG---- 3' |
ASB4 | ebv-miR-BART9 | beg:223 | end:244 | pic:3' TGATGCCCTGGGTACT--TCACAAT 5'& || .||| ||||||| &5' -------GAAAGGTGAATAGTGTTA 3' |
ASB4 | hsa-miR-4264 | beg:197 | end:214 | pic:3' TTACTGGTA---CTGACTCA 5'& || ||||||| &5' -----CCTGAGGGACTGAG- 3' |
ASB4 | hsa-miR-648 | beg:407 | end:417 | pic:3' TGGTCACGGGACGTGTGAA 5'& ||||||| &5' -----------GCACACT- 3' |
ASB4 | hsa-let-7b | beg:22 | end:42 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& || ..|. |||||||| &5' --CCTG--GGCTAACTACCTC- 3' |
ASB4 | hsa-let-7c | beg:22 | end:42 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& || ..|. |||||||| &5' --CCTG--GGCTAACTACCTC- 3' |
ASB4 | hsa-let-7f | beg:23 | end:42 | pic:3' TTGATATGTTAGATGATGGAGT 5'& ||. .| |||||||| &5' --CTGGGCTA---ACTACCTC- 3' |
ASB4 | hsa-miR-124star | beg:162 | end:181 | pic:3' TAGTTCCAGGCG----ACACTTGTGC 5'& |..|| ||||||||| &5' -------TTTGCCTTGTGTGAACAC- 3' |
ASB4 | hsa-miR-1255a | beg:77 | end:100 | pic:3' TTAGATGAAAGAAAC---GAGTAGGA 5'& .|| ||| |||||||| &5' -----GCTGTCTCCTCATCTCATCCT 3' |
ASB4 | hsa-miR-1255b | beg:77 | end:99 | pic:3' TTGGTGAAAGAAAC---GAGTAGGC 5'& .|| ||| ||||||| &5' ----GCTGTCTCCTCATCTCATCC- 3' |
ASB4 | hsa-miR-1258 | beg:62 | end:82 | pic:3' AAGGTGCTGGATTAGGATTGA 5'& ||. |||||||||||.|| &5' ---CAT-ACCTAATCCTAGCT 3' |
ASB4 | hsa-miR-1266 | beg:184 | end:207 | pic:3' TCGGGACAAGATGTCGGGACTCC 5'& || ||| .| .||||||| &5' -GCACTGGTG-GCT-TCCTGAGG 3' |
ASB4 | hsa-miR-1274a | beg:191 | end:210 | pic:3' ACCGC-GGACTTGTCCCTG 5'& |||| ||||| ||||| &5' TGGCTTCCTGA---GGGAC 3' |
ASB4 | hsa-miR-1291 | beg:312 | end:337 | pic:3' TGACGACCAGAAGT-CAGTCCCGGT 5'& ||| || || | ||||||| &5' ---GCTTGTAGCCATGAAAGGGCCA 3' |
ASB4 | hsa-miR-1293 | beg:321 | end:340 | pic:3' CGTGTTTAGAGGTCTGGTGGGT 5'& || || .|.|||||| &5' -CATGAAA----GGGCCACCC- 3' |
ASB4 | hsa-miR-1297 | beg:99 | end:118 | pic:3' GTGGA-CTTAATGAACTT 5'& .|| | ||.|||||| &5' --TCTAGGTTTGCTTGAA 3' |
ASB4 | hsa-miR-1299 | beg:260 | end:284 | pic:3' AGGGAGTGTGTCTTAAGGTCTT 5'& ||..|.| ||||||| | || &5' TCTTTTAAACAGAATGACTGA- 3' |
ASB4 | hsa-miR-130bstar | beg:315 | end:334 | pic:3' CATCACGTTGTCCCTTTCTCA 5'& ||.|.| |||||.| &5' ----TGTAGCCATGAAAGGG- 3' |
ASB4 | hsa-miR-138 | beg:165 | end:187 | pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& |||| .| ||||||||. &5' --GCCTTGTGTG-AACACCAGT- 3' |
ASB4 | hsa-miR-143 | beg:75 | end:96 | pic:3' CTCGAT-GTCACGAAGTAGAGT 5'& ||||. | | |||||||| &5' -AGCTGTCT---CCTCATCTCA 3' |
ASB4 | hsa-miR-151-3p | beg:83 | end:107 | pic:3' GGAGTTCCTCGAAGTCAGATC 5'& ||||| .||||||| &5' CCTCATCTCATCCTAGTCTAG 3' |
ASB4 | hsa-miR-1538 | beg:13 | end:33 | pic:3' TCCTTGTCGTCGTC-GGGCCCGGC 5'& .|| || ||.||||. &5' ------GGCTTGAGTCCTGGGCT- 3' |
ASB4 | hsa-miR-187star | beg:312 | end:325 | pic:3' CGGGCCCAGGACAC-AACATCGG 5'& | |||||||| &5' -------------GCTTGTAGCC 3' |
ASB4 | hsa-miR-1915 | beg:14 | end:31 | pic:3' GGGCGGCGCAGCGGGACCCC 5'& ||. |.|||||| &5' ---GCTTGA--GTCCTGGG- 3' |
ASB4 | hsa-miR-200a | beg:219 | end:244 | pic:3' TGTAGCAATGGTCT--------GTCACAAT 5'& |.||||| .||||||| &5' -------TGCCAGAAAGGTGAATAGTGTTA 3' |
ASB4 | hsa-miR-2114star | beg:4 | end:22 | pic:3' TTCAGGGAACGAACTCCGAGC 5'& |||||||||||||.| &5' ------CTTGCTTGAGGCTTG 3' |
ASB4 | hsa-miR-214star | beg:230 | end:252 | pic:3' CGTGTCGT-TCAC-ATCTGTCCGT 5'& | |||| |||||||||| &5' -----GAATAGTGTTAGACAGGCA 3' |
ASB4 | hsa-miR-218 | beg:235 | end:254 | pic:3' TGTAC-CAATCTAGTTCGTGTT 5'& | |||||| ||.|||.| &5' ----GTGTTAGA-CAGGCATA- 3' |
ASB4 | hsa-miR-224 | beg:185 | end:200 | pic:3' TTGCCTTGGTGATCACTGAAC 5'& ||||.|||.||| &5' --------CACTGGTGGCTT- 3' |
ASB4 | hsa-miR-2278 | beg:287 | end:308 | pic:3' GGTCCGTTGTGTGTGACGAGAG 5'& || .|| || |||||.| &5' --AGATGACTCAGCCTGCTTT- 3' |
ASB4 | hsa-miR-26a | beg:94 | end:118 | pic:3' TCGGA-TAGGACCTAATGAACTT 5'& ||| .||. || ||.|||||| &5' --CCTAGTCTAGGTTTGCTTGAA 3' |
ASB4 | hsa-miR-26a-2star | beg:132 | end:152 | pic:3' CTTTGTTCATTAGTTCTTATCC 5'& .|| || ||||.||| &5' -GAATGAGAAA--AAGAGTAG- 3' |
ASB4 | hsa-miR-26b | beg:94 | end:118 | pic:3' TGGA-TAGGACTTAATGAACTT 5'& ||| .||. | ||.|||||| &5' -CCTAGTCTAGGTTTGCTTGAA 3' |
ASB4 | hsa-miR-29astar | beg:296 | end:316 | pic:3' GACTTGTGGTTTT--CTTTAGTCA 5'& .|| |||||.|| &5' ------GCCTGCTTTGAAATTAG- 3' |
ASB4 | hsa-miR-302cstar | beg:226 | end:246 | pic:3' GTCGTCCATGGGGGTACAATTT 5'& ||||. .|||||.| &5' ----AGGTGAATA-GTGTTAGA 3' |
ASB4 | hsa-miR-3128 | beg:207 | end:228 | pic:3' TACTCTCAAAAAATGAACGGTCT 5'& |||| || | ||||||| &5' -TGAG-GTAAGT--C-TGCCAGA 3' |
ASB4 | hsa-miR-3148 | beg:329 | end:349 | pic:3' TTCGTGTGTGGTCAAAAAAGGT 5'& ..|| ||| ||. ||||||| &5' GGGC-CAC-CCGA--TTTTCCA 3' |
ASB4 | hsa-miR-3151 | beg:37 | end:61 | pic:3' TGGACTAGGGT-AACGGGGTGG 5'& .|||||||. ||| ||. || &5' -TCTGATCCTCTTTGACCTTCC 3' |
ASB4 | hsa-miR-3171 | beg:242 | end:259 | pic:3' CTATATATGTCTAAGGTATGTAGA 5'& ||||. |||||||.| &5' -------ACAGG---CATACATTT 3' |
ASB4 | hsa-miR-3190-5p | beg:45 | end:63 | pic:3' AGAGACCGGCAGATGGAAGGTGT 5'& |||.|| ||||||||. &5' TCTTTG-------ACCTTCCAT- 3' |
ASB4 | hsa-miR-330-3p | beg:292 | end:309 | pic:3' AGAGACGTCCGGCACACGAAACG 5'& || || ||| ||||||| &5' ---CT-CA-GCC---TGCTTTG- 3' |
ASB4 | hsa-miR-335star | beg:122 | end:145 | pic:3' CCAGTCCTCGTTATTACTTTTT 5'& || | |||| |||||.||| &5' -GTGA-GAGCTAGAATGAGAAA 3' |
ASB4 | hsa-miR-33a | beg:170 | end:191 | pic:3' ACGTTACG-TTGATGTTACGTG 5'& .||. ||| ||.||||| &5' ----GTGTGAACACCAGTGCAC 3' |
ASB4 | hsa-miR-33b | beg:170 | end:191 | pic:3' CGTTACG-TTGTCGTTACGTG 5'& .||. |||| ||.||||| &5' ---GTGTGAACACCAGTGCAC 3' |
ASB4 | hsa-miR-379star | beg:50 | end:69 | pic:3' TCAATCACCTGGTAC--AATGTAT 5'& |||| ||||||| &5' --------GACCTTCCATTACATA 3' |
ASB4 | hsa-miR-383 | beg:26 | end:47 | pic:3' TCGGTGTTAGTGGAAGACTAGA 5'& .||.| .||| ||||||| &5' GGCTAAC--TACC-TCTGATC- 3' |
ASB4 | hsa-miR-4257 | beg:23 | end:44 | pic:3' GAGTC-AGGGGTGGAGACC 5'& || .| | |.||||||| &5' CTGGGCTAACTACCTCTG- 3' |
ASB4 | hsa-miR-4259 | beg:66 | end:83 | pic:3' AGGACTGGGGATCTGGGTTGAC 5'& |||| ||.|.||| &5' --------CCTAATCCTAGCTG 3' |
ASB4 | hsa-miR-4285 | beg:17 | end:37 | pic:3' TACTCAG--CCTGAGCGGCG 5'& |||||| ||.|| |. &5' -TGAGTCCTGGGCTAACT-- 3' |
ASB4 | hsa-miR-4296 | beg:17 | end:36 | pic:3' ACTC-GGACTCGGGTGTA 5'& |||| ||||.||. || &5' TGAGTCCTGGGCTAAC-- 3' |
ASB4 | hsa-miR-4309 | beg:18 | end:33 | pic:3' ACCTTAGGATCTGAGGTC 5'& ||.||||.|.|| &5' --GAGTCCTGGGCT---- 3' |
ASB4 | hsa-miR-4328 | beg:19 | end:37 | pic:3' TTAGGACCCTTTTGACC 5'& |.||||||| |||| &5' AGTCCTGGGCTAACT-- 3' |
ASB4 | hsa-miR-498 | beg:98 | end:119 | pic:3' CTTTTTGCGGGGGAC--CGAACTTT 5'& |.|. |||||||| &5' -------GTCTAGGTTTGCTTGAAA 3' |
ASB4 | hsa-miR-498 | beg:290 | end:312 | pic:3' CTTTTTGCGGGGGACCGAACTTT 5'& .|| | |||| .|||||| &5' ----GACTCAGCCTGCTTTGAAA 3' |
ASB4 | hsa-miR-498 | beg:3 | end:24 | pic:3' CTTTTTGCGGGGGA---CCGAACTTT 5'& ||.. || |||||||. &5' -------GCTTGCTTGAGGCTTGAG- 3' |
ASB4 | hsa-miR-505star | beg:186 | end:202 | pic:3' TGTAGTTATGAAGGACCGAGGG 5'& ||| |||||.|| &5' --------ACTGG-TGGCTTCC 3' |
ASB4 | hsa-miR-542-5p | beg:187 | end:205 | pic:3' AGAGCACTGTACTACTAGGGGCT 5'& || |||.| |.||.|| &5' -CTGGTGGC-------TTCCTGA 3' |
ASB4 | hsa-miR-548j | beg:282 | end:308 | pic:3' TGGTTTCTG--GCGTTA-ATGAAAA 5'& |.|||||. | ||. |.|||| &5' -CTAAAGATGACTCAGCCTGCTTT- 3' |
ASB4 | hsa-miR-586 | beg:375 | end:402 | pic:3' CCTGGATTTTTATGT------TACGTAT 5'& |||||| ||.| |||.||| &5' ----CTAAAATTATATTTATTATGTATA 3' |
ASB4 | hsa-miR-589star | beg:148 | end:169 | pic:3' AGACCCTTGGCCG-TAAACAAGACT 5'& |.| |||||||.|| &5' ------AGCAAATAATTTGTTTTG- 3' |
ASB4 | hsa-miR-627 | beg:281 | end:299 | pic:3' AGGAGAAAAGAA-TCT-CTGAGTG 5'& ||| ||| |||||| &5' --------TCTAAAGATGACTCA- 3' |
ASB4 | hsa-miR-631 | beg:198 | end:222 | pic:3' CGACTCCA-GAC-CCGGTCCAGA 5'& |||||| ||| ||. |||| &5' -CTGAGGGACTGAGGTAA-GTCT 3' |
ASB4 | hsa-miR-636 | beg:404 | end:415 | pic:3' ACGCCCGCCCTGCTCGTTCGTGT 5'& .||||||| &5' ---------------TAAGCACA 3' |
ASB4 | hsa-miR-646 | beg:193 | end:212 | pic:3' CGGAGT-CTCCGTCGACGAA 5'& ||.|| |||| | ||| &5' GCTTCCTGAGGGA-CTG--- 3' |
ASB4 | hsa-miR-654-3p | beg:235 | end:254 | pic:3' TTCCACTAC-CAGTC-GTCTGTAT 5'& | ||.|| |||.|||| &5' --------GTGTTAGACAGGCATA 3' |
ASB4 | hsa-miR-663b | beg:317 | end:339 | pic:3' GGAGTCCGTGCCGGCCCGGTGG 5'& .|| ||.| |||||||| &5' ---TAGCCATGAAAGGGCCACC 3' |
ASB4 | hsa-miR-671-5p | beg:181 | end:203 | pic:3' GAGGTCGGGGAGGTC-CCGAAGGA 5'& ||||. | | | |||||||| &5' --CCAGTGCA-CTGGTGGCTTCCT 3' |
ASB4 | hsa-miR-675star | beg:234 | end:256 | pic:3' ACTCGCCA-CTC-CCGTATGTC 5'& ||.| || |||||||| &5' --AGTGTTAGACAGGCATACA- 3' |
ASB4 | hsa-miR-875-3p | beg:330 | end:350 | pic:3' GTGTTGGAGTCACAAAGGTCC 5'& .| ||| |. ||||||| &5' -GCCACC-CGAT-TTTCCAG- 3' |
ASB4 | hsa-miR-886-5p | beg:25 | end:48 | pic:3' GGCGAACTCGATTG----AGGCTGGGC 5'& ||.|||||| ||.||.|| &5' -----TGGGCTAACTACCTCTGATCC- 3' |
ASB4 | hsv1-miR-H1 | beg:42 | end:64 | pic:3' AGGTGAAGGGCAGGAAGGTAG 5'& ||| |||. ||||||||. &5' TCCTCTTTGA--CCTTCCATT 3' |
ASB4 | hsv1-miR-H4star | beg:233 | end:252 | pic:3' TGATCGCTCAATCTGTCCGTTC 5'& |||. |||||||||||| &5' --TAGT--GTTAGACAGGCA-- 3' |
ASB4 | hsv2-miR-H6 | beg:41 | end:64 | pic:3' CGTAGG-GGAGC-GGAAGGTAA 5'& |||| |.|.| ||||||||| &5' --ATCCTCTTTGACCTTCCATT 3' |
ASB4 | sv40-miR-S1-3p | beg:235 | end:251 | pic:3' TGAGTCCCGTACTTTGTCCG 5'& |..| |.|||||| &5' -------GTGTTAGACAGGC 3' |