iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs12134	snp	C/T	0	0	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117959970	TAACTTGCAGAAGGT[C/T]AAGTCTGAGGACGCT	10885
rs1321663	snp	C/G	0.185788	0.241613	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117930416	TATTCTAAGTAAAAC[C/G]AATAATATGAAGAAT	10885
rs1321664	snp	G/T	0.130502	0.219591	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117931561	agtggagatgttcag[G/T]aaatattggaaactc	10885
rs1321665	snp	A/C	0.498481	0.027514	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117931602	ATTCATGTAGGTGGA[A/C]AGGACTGGAAATAGA	10885
rs1321666	snp	C/T	0.498059	0.0310896	intron-variant	WDR3	GRCh38.p7	1:117949429	AATACTTTAAACAAA[C/T]CTAGATTATCCATTC	10885
rs2273579	snp	A/G	9.95851e-05	0.00705568	intron-variant	WDR3	GRCh38.p7	1:117953003	CAACCAGCAGTAAGT[A/G]AATTTTGGGGACCTT	10885
rs2273580	snp	C/T	0.148996	0.228688	intron-variant, utr-variant-3-prime, downstream-variant-500B	WDR3, SPAG17	GRCh38.p7	1:117953817	ATGACACTCAGTCTC[C/T]TCCCTGTACATTAAA	10885
rs2273581	snp	C/G	0.180064	0.240019	intron-variant, utr-variant-3-prime, nc-transcript-variant	WDR3, SPAG17	GRCh38.p7	1:117953880	TTTTGGCACTCTATT[C/G]GCACGTCTTTATTAA	10885
rs2295627	snp	C/G	0.115438	0.210697	intron-variant	WDR3	GRCh38.p7	1:117949330	TGCCATGTAATGAGA[C/G]TAATTTTCTTGATAA	10885
rs2295628	snp	G/T	0.179425	0.239831	intron-variant	WDR3	GRCh38.p7	1:117949600	AGCAGACCCAAAAGA[G/T]CAGTGAAAGGGGCTA	10885
rs2295629	snp	A/G	0.357238	0.225832	intron-variant	WDR3	GRCh38.p7	1:117949904	GAATGGCCTTTTGAC[A/G]TCTTATATCATTTGT	10885
rs2295630	snp	G/T	0.0795104	0.182848	synonymous-codon	WDR3	GRCh38.p7	1:117952530	TTTTCTCCTCCAGGG[G/T]CATCACCAGGAAATA	10885
rs2295631	snp	A/G/T	0.151613	0.239392	intron-variant	WDR3, SPAG17	GRCh38.p7	1:117954669	TTTGTTTATTAAAAG[A/G/T]TTACTTACAAGGACA	10885
rs3059173	in-del	-/GTGT			utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960144	tgtgtgtgtgtgtgt[-/GTGT]atgtgtatgtgtatg	10885
rs3215666	in-del	-/T			intron-variant	WDR3, SPAG17	GRCh38.p7	1:117958783	TTTTTTTTTTTTTTT[-/T]GCTCGAAACATTTCT	10885
rs3222566	microsatellite	(CA)24/25/26/27/28/29	0.701178	0.158572	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960111	ATATATGTATGTGTA[(CA)24/25/26/27/28/29]GAGTGTATTAATTCC	10885
rs3736795	snp	A/G/T	4.94654e-05	0.00497295	missense, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117957175	TTGAACTTATATGCC[A/G/T]GTGCCTCTTCTTCCT	10885
rs3738420	snp	C/G	0.0448128	0.142822	missense	WDR3	GRCh38.p7	1:117940851	CCGGAAGAACCAGAC[C/G]CCAAGAAAATCAAAG	10885
rs3754126	snp	A/C	0.00159617	0.0282053	intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117928245	gcaaaaggaggcaaa[A/C]ctTCCACTGAATCTC	10885
rs3754127	snp	C/T	0.406986	0.194565	intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117928589	CCTATGCTGCTACAG[C/T]TGTCCACAGTCTCAT	10885
rs3754129	snp	C/T	0.0722614	0.17581	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117930540	TGGCAAACGATTTAG[C/T]CTTTTCAAGGCTTTA	10885
rs3765501	snp	A/G	0.499464	0.016365	intron-variant	WDR3	GRCh38.p7	1:117937126	GATATCAGTTTTTCT[A/G]TGTTTCTTAGCCTTT	10885
rs3830944	in-del	-/GT			intron-variant	WDR3	GRCh38.p7	1:117933591	TGAGTTTTTTTGTGT[-/GT]CTGTGCCCTTAGAAG	10885
rs4658973	snp	G/T	0.404907	0.196224	intron-variant	WDR3, SPAG17	GRCh38.p7	1:117956431	ACAAGAAACAACACT[G/T]GTCTTAGGATAAAGA	10885
rs6680844	snp	C/T	0.497749	0.0334707	intron-variant	WDR3	GRCh38.p7	1:117935460	ACTTCAATGCAAGTA[C/T]CAATGCAAAATAGAT	10885
rs6690060	snp	A/C	0.0244538	0.107838	intron-variant, upstream-variant-2KB, utr-variant-5-prime	GDAP2, WDR3	GRCh38.p7	1:117928777	TTCTTTTGTACAGCT[A/C]TGTTAGCTTTAATTT	10885
rs6696092	snp	A/G	0.495252	0.0484902	intron-variant	WDR3	GRCh38.p7	1:117935953	ctctaagaatgatag[A/G]caaaagaaagtcatg	10885
rs6696148	snp	C/T	0.154993	0.231244	upstream-variant-2KB, intron-variant, utr-variant-5-prime	GDAP2, WDR3	GRCh38.p7	1:117929801	AGTCCTGGAGGTGCG[C/T]GGTTGGGGCGGAGAG	10885
rs6698697	snp	A/T	0.499816	0.0095829	intron-variant	WDR3	GRCh38.p7	1:117935964	atagacaaaagaaag[A/T]catgaattggcaatt	10885
rs6698866	snp	C/T	0.499809	0.00978247	intron-variant	WDR3	GRCh38.p7	1:117936101	tttacttatgatatt[C/T]gtagtagtttttgag	10885
rs6703044	snp	C/G	0.0596104	0.162024	intron-variant	WDR3	GRCh38.p7	1:117945061	gctctaccttcaaaa[C/G]tgatcccaaatccag	10885
rs7515738	snp	C/T	0.179425	0.239831	intron-variant	WDR3	GRCh38.p7	1:117938958	GGACTGTTTTTTATA[C/T]ATCTTTGCATCCTCA	10885
rs7523403	snp	C/G	0.148661	0.22854	intron-variant	WDR3	GRCh38.p7	1:117938653	GGCTCTTTGTTTTTA[C/G]TGCACACAGTAATTA	10885
rs7524166	snp	A/G/T	0.016072	0.0881936	intron-variant	WDR3	GRCh38.p7	1:117939447	AATCTCTTGAAAATC[A/G/T]TATTACTCAAATCTT	10885
rs7543388	snp	A/C	0.499801	0.00998203	intron-variant	WDR3	GRCh38.p7	1:117937639	TAGGGAATATAAAGG[A/C]AAAGAAATAACACTG	10885
rs10733098	snp	A/G	0	0	intron-variant	WDR3	GRCh38.p7	1:117941642	GTTGTCCAAGGTAAT[A/G]CAACTACTAAGGGAA	10885
rs10802002	snp	A/G	0.499809	0.00978247	intron-variant	WDR3	GRCh38.p7	1:117936299	tcagagatacataca[A/G]aaatttgtatataag	10885
rs10923448	snp	C/T	0.491885	0.0631791	intron-variant	WDR3	GRCh38.p7	1:117937968	ATGAGAGAACAGCAA[C/T]GGACAAAGAGACCAA	10885
rs11370392	in-del	-/T			intron-variant	WDR3	GRCh38.p7	1:117948593	TTTTTTTTTTTTTTT[-/T]GGTCTAATCTTTAGT	10885
rs11587893	snp	A/G/T	0.0126979	0.078662	intron-variant	WDR3	GRCh38.p7	1:117938425	TGGATCTCCCTATTC[A/G/T]TTGAATGAGTTTTCC	10885
rs12044269	snp	A/G			intron-variant	WDR3	GRCh38.p7	1:117939608	TGGGCAATATGTTTA[A/G]AAGTTTCATAAGCAC	10885
rs12066505	snp	C/T	0.000399281	0.0141238	intron-variant	WDR3, SPAG17	GRCh38.p7	1:117959104	AGCAATACCCACCAC[C/T]GATAAATCCATATTT	10885
rs12075590	snp	A/G	0.192088	0.2432	intron-variant	WDR3	GRCh38.p7	1:117932109	CCATGTAAAGAACAG[A/G]TGGGACTGATTTGTT	10885
rs12079457	snp	A/T	0.19459	0.243782	intron-variant	WDR3	GRCh38.p7	1:117933921	TTGTTAAAGTAGACT[A/T]TGATACTTTGTGTGA	10885
rs12136368	snp	A/G	0.030278	0.119257	upstream-variant-2KB, intron-variant, utr-variant-5-prime	GDAP2, WDR3	GRCh38.p7	1:117929802	GTCCTGGAGGTGCGT[A/G]GTTGGGGCGGAGAGC	10885
rs12403592	snp	C/T	0.0471551	0.14613	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117959539	GTCATCTTAAAAATA[C/T]CAAATAACAGAAGAT	10885
rs12406673	snp	C/T	0.40733	0.194287	intron-variant	WDR3	GRCh38.p7	1:117944758	ccaggctggagtgca[C/T]tgatgtgatctcgcc	10885
rs13375359	snp	A/T			intron-variant	WDR3	GRCh38.p7	1:117934315	TACTAATTTCTATAT[A/T]AAAAAACTTGAAATG	10885
rs17037749	snp	A/C	0.122064	0.214785	intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117929323	CCAGGCTCGTTCTTC[A/C]AGAGAAGTGACAGAA	10885
rs17037751	snp	A/G	0.0494327	0.149241	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117930204	GATCATGGGGTCTCG[A/G]AAGAAGGTTTGGTCG	10885
rs17037754	snp	G/T	0.135825	0.222405	intron-variant, upstream-variant-2KB	WDR3, GDAP2	GRCh38.p7	1:117931919	GATTGAATTTTTTTT[G/T]TGTTAGACTAAAACA	10885
rs17037761	snp	G/T	0.0513262	0.151752	intron-variant	WDR3	GRCh38.p7	1:117932126	GGGACTGATTTGTTA[G/T]CTCCTTCATTCACCT	10885
rs17037769	snp	C/G	0.101658	0.201233	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117959933	CTTAGAGCTAAAAAG[C/G]ACTGTAAAAATTACC	10885
rs17037771	snp	A/G	0.0599851	0.162463	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960102	GCTTCTGAGGAATTA[A/G]TACACTCGTGTGTGT	10885
rs34127339	snp	C/T	0.0123036	0.0774623	intron-variant	WDR3	GRCh38.p7	1:117941406	AAATATTAATAATTA[C/T]TATTAGGTTGGTGGA	10885
rs34154653	snp	C/G	0.148326	0.228391	intron-variant	WDR3	GRCh38.p7	1:117947902	ATTTTTTTTTAAATT[C/G]ACTGCCTTCCTTAGT	10885
rs34274601	in-del	-/G			frameshift-variant, utr-variant-3-prime, nc-transcript-variant	WDR3, SPAG17	GRCh38.p7	1:117954020	GGCTGAGAGGATTAT[-/G]GGAGGCTATTGAGTT	10885
rs34353093	snp	G/T	0	0	intron-variant	WDR3, SPAG17	GRCh38.p7	1:117959077	TAGTATAGTATGCTG[G/T]GCTTTGTCTTTAGCA	10885
rs34411361	snp	A/G	0.0880469	0.19045	synonymous-codon	WDR3	GRCh38.p7	1:117948479	ACATGATGGAGCTTT[A/G]TGGTCCATGTCCCTC	10885
rs34587482	in-del	-/G			intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117929365	CTGCAATCCTGACCA[-/G]GGGCCGAGTCCCGAG	10885
rs34845816	in-del	-/A			intron-variant	WDR3	GRCh38.p7	1:117936490	ATTAAATGAATAAAG[-/A]AAAGGTTGTAAAATG	10885
rs34964004	in-del	-/G			intron-variant	WDR3	GRCh38.p7	1:117952257	TCTTTTTACTAACCT[-/G]GGAATTTGATGACAT	10885
rs34973445	snp	C/T	0.104694	0.203436	missense	WDR3	GRCh38.p7	1:117939526	GACTCATCACTGGGG[C/T]CTCAGACAGTGAACT	10885
rs35142535	in-del	-/G			intron-variant	WDR3	GRCh38.p7	1:117941558	CTTGTTCAGCCTTCA[-/G]GAGCAATGCTACAAG	10885
rs35181697	in-del	-/G			intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117929272	CCCCGACAACGCCTC[-/G]GGGAAAGAACCTAAC	10885
rs35438415	in-del	-/C			intron-variant, upstream-variant-2KB	WDR3, GDAP2	GRCh38.p7	1:117931771	GAATTAATCAAATGG[-/C]CTAGGCTAAGAGCAT	10885
rs35595401	in-del	-/A			intron-variant	WDR3	GRCh38.p7	1:117941447	TGGTTTTTGCCATTT[-/A]AAAAGTAATAATTGC	10885
rs41276598	snp	C/G	0.00597247	0.0543191	upstream-variant-2KB, intron-variant, utr-variant-5-prime	GDAP2, WDR3	GRCh38.p7	1:117929798	GTGAGTCCTGGAGGT[C/G]CGTGGTTGGGGCGGA	10885
rs41276600	snp	A/G	0.000132685	0.00814402	intron-variant	WDR3	GRCh38.p7	1:117942417	ATAAGAGCATGATAT[A/G]CTTTTCTTCTTCCCT	10885
rs41276602	snp	G/T	0.0308909	0.120379	intron-variant	WDR3	GRCh38.p7	1:117949964	ATTTGTATACTCATT[G/T]ATTTTTTCTTGATGT	10885
rs41276604	snp	C/T	0.00159617	0.0282053	intron-variant	WDR3, SPAG17	GRCh38.p7	1:117955056	TATTGCATGTCTCAT[C/T]ACAGTAATTTTGTGA	10885
rs55743091	in-del	-/A			intron-variant	WDR3	GRCh38.p7	1:117946941	AAAAAAAAAAAAAAA[-/A]TGAGTAATTTGGAGC	10885
rs55917054	snp	C/T			intron-variant	WDR3	GRCh38.p7	1:117942880	TATCAGAACCAGGAT[C/T]TGAGCCTAGTTTTTT	10885
rs56006823	snp	G/T	0.150333	0.229274	intron-variant	WDR3	GRCh38.p7	1:117945719	ATTTGATTAATTAAT[G/T]AATGTTTGTGGTCCT	10885
rs56841661	snp	C/T	0.192088	0.2432	intron-variant	WDR3	GRCh38.p7	1:117936297	AATCAGAGATACATA[C/T]AGAAATTTGTATATA	10885
rs57769243	snp	A/T	0.148326	0.228391	intron-variant	WDR3	GRCh38.p7	1:117950238	CCCAGCGATAGTACA[A/T]TTCTAAAAATGTGTG	10885
rs58403486	snp	G/T	0.148326	0.228391	intron-variant	WDR3	GRCh38.p7	1:117945518	TCCCAGCATTATGTT[G/T]CTCTATAGCACCTAA	10885
rs58411603	snp	A/G	0	0	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960148	TGTGTGTGTGTGTGT[A/G]TGTGTATGTGTATGT	10885
rs58683881	snp	A/G	0.00442145	0.04681	synonymous-codon	WDR3	GRCh38.p7	1:117934565	GTATGAGGATGGGTC[A/G]ATCCGAATCTTCAGT	10885
rs60053262	in-del	-/T	0	0	intron-variant	WDR3	GRCh38.p7	1:117951525	TTTTTTTTTTTTTTT[-/T]ATGTTGACAACCATT	10885
rs60123653	snp	A/G	0.0501905	0.150254	intron-variant	WDR3	GRCh38.p7	1:117945667	GGTAATGTAGTGGGC[A/G]TTCAGTAAATGTTTG	10885
rs60910565	snp	C/T			intron-variant	WDR3	GRCh38.p7	1:117941980	GAACTTGTGAGGTAT[C/T]GATAACCCAAATTTG	10885
rs60920480	snp	A/G	0.00519212	0.0506863	missense	WDR3	GRCh38.p7	1:117934612	GAAATGTGACCTTCA[A/G]TGGTCACAAAGCAGC	10885
rs61181793	in-del	-/GT	0	0	utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960147	TGTGTGTGTGTGTGT[-/GT]ATGTGTATGTGTATG	10885
rs61806137	snp	C/T	0	0	intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117928489	AAATGCTCCCTTTCC[C/T]ACCAAGCTTATTAAA	10885
rs61806139	snp	A/G			utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960154	TGTGTGTGTATGTGT[A/G]TGTGTATGTACACAT	10885
rs66533811	in-del	-/T			intron-variant	WDR3	GRCh38.p7	1:117951509	TGTTAAATGTATTTC[-/T]TTTTTTTTTTTTTTT	10885
rs66538942	in-del	-/GT			utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960146	GTGTGTGTGTGTGTG[-/GT]TATGTGTATGTGTAT	10885
rs71070708	in-del	-/TCTG	0	0	downstream-variant-500B, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960465	AAAATGAATTGTCTG[-/TCTG]GATTGGCAGGCAACC	10885
rs71584517	in-del	-/GTCT	0.5	0	downstream-variant-500B, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960460	TTTATAAAATGAATT[-/GTCT]GTCTGGATTGGCAGG	10885
rs71645747	in-del	-/CTAC			intron-variant	WDR3	GRCh38.p7	1:117936357	CAGAAGGTTGGAAAC[-/CTAC]TAAATGTCTGAAACA	10885
rs72307273	in-del	-/TG			utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960119	CACTCGTGTGTGTGT[-/TG]GTGTGTGTGTGTGTG	10885
rs72418301	in-del	-/GTGT			utr-variant-3-prime, intron-variant	WDR3, SPAG17	GRCh38.p7	1:117960110	GGAATTAATACACTC[-/GTGT]GTGTGTGTGTGTGTG	10885
rs72631707	snp	G/T	0.155656	0.231515	intron-variant	WDR3	GRCh38.p7	1:117951252	GATAATGCTGCTGAG[G/T]AGCTCGGATTTATAT	10885
rs72697552	snp	A/T	3.61317e-05	0.00425024	intron-variant	WDR3	GRCh38.p7	1:117943366	AGCTAAGATGGTAGC[A/T]AGAACATTTATGATT	10885
rs74113095	snp	C/T	0.122064	0.214785	intron-variant, upstream-variant-2KB	GDAP2, WDR3	GRCh38.p7	1:117928415	TGAAGCACACACTTC[C/T]CCCCATAATAATATA	10885
rs74113097	snp	A/G	0.122411	0.214991	upstream-variant-2KB, intron-variant	GDAP2, WDR3	GRCh38.p7	1:117931408	TATTTTTTTATTAAT[A/G]ATTCAAAGGTTATTA	10885
rs74113100	snp	C/T	0.148326	0.228391	intron-variant	WDR3	GRCh38.p7	1:117941474	TTGCAATTACTTTTG[C/T]ACCAGTATTATTATT	10885
rs74113101	snp	C/T	0.0513262	0.151752	intron-variant	WDR3	GRCh38.p7	1:117944702	TTCTTGATTTTCTTT[C/T]ATTTATTTATTTATT	10885
rs74114903	snp	C/T	0.0513262	0.151752	intron-variant	WDR3	GRCh38.p7	1:117945226	CCAGTGTAATCTTTT[C/T]ATAGTGGAAGTTAGA	10885

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