iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs7724	snp	A/G	0.237882	0.249706	utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233475950	CCGCTCAGGAGACTC[A/G]CACTGGGTGTAGACT	55230
rs745154	snp	A/G	0.0655868	0.168795	intron-variant	USP40	GRCh38.p7	2:233477865	ACTCGTCACAATCAC[A/G]CACACCTGTGTGACA	55230
rs745155	snp	G/T	0.466204	0.125522	intron-variant	USP40	GRCh38.p7	2:233478157	GTGAATGAAGCTGCC[G/T]TGTAATTTTGGGGAT	55230
rs768811	snp	C/T	0.4087	0.193169	intron-variant	USP40	GRCh38.p7	2:233496267	CCCTTTCGTAAGCAT[C/T]GCATAGCACTACTTT	55230
rs838543	snp	C/T	0.308942	0.242952	missense, nc-transcript-variant	USP40	GRCh38.p7	2:233523371	TAGAATCTCCACATG[C/T]CTTTCCAGCTAATGC	55230
rs838544	snp	C/G	0.381503	0.21262	intron-variant	USP40	GRCh38.p7	2:233522676	AAATAGAGCAGTTAC[C/G]TGGCGAATTACCCCC	55230
rs838545	snp	A/G	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233522049	GCAAGTCAGTAGGCT[A/G]TAGTGGGACCTTGGG	55230
rs838546	snp	A/G	0.483126	0.0902898	intron-variant	USP40	GRCh38.p7	2:233521871	TACGGTCATTGTCAT[A/G]ATTATCATACAGTTT	55230
rs838547	snp	G/T	0.478354	0.101757	intron-variant	USP40	GRCh38.p7	2:233519130	ccattactccaaaaa[G/T]atccctgtacccatc	55230
rs838548	snp	A/C	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233518972	atcatttttgaggtt[A/C]gtccatgatttagta	55230
rs838549	snp	A/G	0.308426	0.243077	intron-variant	USP40	GRCh38.p7	2:233524478	ACGAATATTTCTTCA[A/G]TAATTTTTTTTACCT	55230
rs838550	snp	C/T	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233525975	ACACTCATCTTCTAG[C/T]TGCTTGAAAGGAATG	55230
rs838551	snp	C/T	0.381308	0.21274	intron-variant	USP40	GRCh38.p7	2:233526193	CTTCTTATTTACAAG[C/T]GATTAGTTTGCTGTG	55230
rs838552	snp	C/T	0.361263	0.223876	intron-variant	USP40	GRCh38.p7	2:233513383	catgtagttgtgttg[C/T]agtgctaaacccacc	55230
rs838553	snp	C/G	0.391024	0.206427	intron-variant	USP40	GRCh38.p7	2:233513464	caagcagtaaccatt[C/G]acttcatttctttca	55230
rs838554	snp	A/G	0.478437	0.10157	intron-variant	USP40	GRCh38.p7	2:233513645	tgctctgacatgcac[A/G]aatttcattactacc	55230
rs838555	snp	A/G	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233515329	atattgctgatggga[A/G]ggtaaaatgggtaag	55230
rs838556	snp	A/T	0	0	intron-variant	USP40	GRCh38.p7	2:233504155	ttcttatttgtgtat[A/T]ttctgtcatgtcttt	55230
rs838557	snp	A/G	0.203267	0.245593	intron-variant	USP40	GRCh38.p7	2:233501895	cttctctatctttga[A/G]cattctgctgcccag	55230
rs838558	snp	A/G	0.254664	0.249956	intron-variant	USP40	GRCh38.p7	2:233500253	TTTAATGTCTATGAA[A/G]TTAACTTGATTAATC	55230
rs838559	snp	A/G	0.366885	0.220993	intron-variant, utr-variant-3-prime	USP40	GRCh38.p7	2:233487008	TGGTCAAGGACAGAA[A/G]AGCCCATGGAAGGGG	55230
rs838560	snp	A/G	0.31503	0.241394	intron-variant	USP40	GRCh38.p7	2:233488911	GACCCTGTCTATTAA[A/G]AAAAGAAAGAAAAGG	55230
rs838561	snp	A/G	0.255503	0.249939	intron-variant	USP40	GRCh38.p7	2:233489771	CATCATGTTTAAAAA[A/G]TGAAACTTTGGAATT	55230
rs838562	snp	C/T	0.257732	0.24988	intron-variant	USP40	GRCh38.p7	2:233489938	GAAGTATTTCAAAAT[C/T]TTTGGCTGCAATCAG	55230
rs838563	snp	A/G	0.0402882	0.136092	intron-variant	USP40	GRCh38.p7	2:233490475	CCACACCCAGCCAAC[A/G]TATGCTTTTTCTTGA	55230
rs860794	snp	C/T	0.279461	0.248258	intron-variant	USP40	GRCh38.p7	2:233518342	tgacctcaggtaatc[C/T]gcccacctcggcctc	55230
rs896833	snp	G/T	0.266	0.249487	intron-variant	USP40	GRCh38.p7	2:233495542	AATTACAGGCATCAG[G/T]CACCGTGCCTAGCCT	55230
rs1020602	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233549673	TATATATCTAGTTGA[A/G]ATTGTCCTCTATTTC	55230
rs1037450	snp	C/T			intron-variant	USP40	GRCh38.p7	2:233491335	GAATACATTGCCATG[C/T]TTTGATATTGTNAAT	55230
rs1037451	snp	C/T	0.254664	0.249956	intron-variant	USP40	GRCh38.p7	2:233552749	TGAAAGCTACAGGCA[C/T]AGGGTTTAAGGTTTT	55230
rs1048603	snp	C/T	0.457356	0.139655	missense, downstream-variant-500B, nc-transcript-variant	USP40	GRCh38.p7	2:233485841	GTTGCCGATTTCTAT[C/T]GTCTTCCCGTGGAGA	55230
rs1097929	snp	C/T	0.266273	0.24947	intron-variant	USP40	GRCh38.p7	2:233507020	ggcaaaagactttag[C/T]aaacatttctcaaaa	55230
rs1097930	snp	C/T	0.381308	0.21274	intron-variant	USP40	GRCh38.p7	2:233507155	tagaatggctactat[C/T]aaaaaaacaagagaa	55230
rs1097931	snp	A/G	0.361474	0.223771	intron-variant	USP40	GRCh38.p7	2:233505968	taccacttgataatt[A/G]tgaatggtcttttta	55230
rs1125887	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233491158	TTATGGTGCAGGAAT[A/G]AGTCTGACCTGAGAC	55230
rs1220430	snp	A/G	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233521387	TGATTTGCAGGGTGC[A/G]GGCAGAAGCCAGCAA	55230
rs1344382	snp	A/C	0	0	missense, nc-transcript-variant	USP40	GRCh38.p7	2:233491216	GAGATCTCTATGTCT[A/C]CCAAGTAGAGGAGAG	55230
rs1377459	snp	G/T	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233541149	TATACTTCAAAACAT[G/T]TAGATAAGACATTAA	55230
rs1377461	snp	A/G	0.253824	0.249971	upstream-variant-2KB, intron-variant	USP40	GRCh38.p7	2:233565958	TGGATTAGTTGTGGC[A/G]ACAGGTTTTCTTTTT	55230
rs1453320	snp	G/T			intron-variant	USP40	GRCh38.p7	2:233532693	CTACCGATGACACCA[G/T]CATTTTGGGAGGCTG	55230
rs1453321	snp	A/T	0.360842	0.224085	intron-variant	USP40	GRCh38.p7	2:233537948	ctatatgttactact[A/T]ctgcttaaacacttt	55230
rs1470864	snp	G/T	0.36606	0.221428	intron-variant, downstream-variant-500B	USP40	GRCh38.p7	2:233485683	CACAGTGATAGAGAA[G/T]TTAGTGAGAACTTGA	55230
rs1470865	snp	A/C	0.323197	0.239044	intron-variant	USP40	GRCh38.p7	2:233541574	tgccatgacaaaatg[A/C]cacagactgcatggc	55230
rs1542325	snp	C/G	0.254944	0.249951	intron-variant	USP40	GRCh38.p7	2:233548106	AGAACTGGCATAGTA[C/G]ATTGGTAGAGAAAAA	55230
rs1542326	snp	A/G	0.254664	0.249956	intron-variant	USP40	GRCh38.p7	2:233546512	TCCACCTCAGGGAGT[A/G]TGCCCCTACATTCCT	55230
rs1545524	snp	C/T	0.155987	0.23165	intron-variant	USP40	GRCh38.p7	2:233541107	TTTGTACTTACGTAT[C/T]TCTTCCAAAATTCTT	55230
rs1545525	snp	A/G	0.326001	0.238168	intron-variant	USP40	GRCh38.p7	2:233540816	TTTGTTAAGTATGCA[A/G]TTATTTCTCATCAGA	55230
rs1597940	snp	A/G	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233537865	tggagtttactgctc[A/G]ttatttatccaggtt	55230
rs1901812	snp	A/G	0.26271	0.249677			GRCh38.p7	2:233542176	AATGTATGCGGTTTA[A/G]TTGCTAGGTGTGATA	55230
rs2034675	snp	C/T	0.295343	0.245854	intron-variant, upstream-variant-2KB	USP40	GRCh38.p7	2:233543514	ATACTATTGCATTGG[C/T]GGTTAGGTTTCAACG	55230
rs2053988	snp	A/T			missense, intron-variant, utr-variant-5-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233549135	AAATGATCAACATCT[A/T]TAATATATACATGGT	55230
rs2123620	snp	G/T			intron-variant, upstream-variant-2KB	USP40	GRCh38.p7	2:233543333	GATGTTTTTATTTGT[G/T]TTGGTTTTACTTTAT	55230
rs2124045	snp	G/T	0.266	0.249487	intron-variant	USP40	GRCh38.p7	2:233491721	ATTGTACCAGGAACT[G/T]GGGAGACAAGATAGA	55230
rs2124046	snp	A/G			intron-variant, nc-transcript-variant	USP40	GRCh38.p7	2:233491044	TGGCATTTGTCATAT[A/G]CCATGTTCAGTGGTA	55230
rs2167884	snp	C/T	0.308882	0.242967	synonymous-codon, utr-variant-5-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233540670	AAACAGCATGGACCA[C/T]TGCGGAAGGTAATAC	55230
rs2167885	snp	A/G	0.288646	0.246995	intron-variant, synonymous-codon	USP40	GRCh38.p7	2:233487896	ATAAGGGGGCAGAGC[A/G]ACGGGAGCAATGATG	55230
rs2242096	snp	C/T			utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233477106	GCTGCCTTTTTTTTT[C/T]TTTTAACCAGAAAAT	55230
rs2242097	snp	A/G	0.157972	0.232445	utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233476630	GCTGCTGCCGTCCAC[A/G]GCGCCTCAGCCTCTC	55230
rs2276566	snp	C/G	0.20511	0.245937	intron-variant, utr-variant-3-prime	USP40	GRCh38.p7	2:233486513	TTAGCAGGAGGAGCA[C/G]AAAGAACAACACTCA	55230
rs2602386	snp	A/C	0.440666	0.161751			GRCh38.p7	2:233496728	AACAATTATTACTTA[A/C]GAGTTGTCTATTCAG	55230
rs2602387	snp	A/T	0.295343	0.245854			GRCh38.p7	2:233516377	gataattcttcccca[A/T]ttgatgtgtagattt	55230
rs2602388	snp	A/G	0.0252325	0.109451			GRCh38.p7	2:233515984	aataggtgcgtagtc[A/G]ttgactttcaacaaa	55230
rs2602389	snp	C/T	0.320335	0.239902			GRCh38.p7	2:233514475	ttcccatgctgactt[C/T]tctgcgtttctcAGT	55230
rs2602392	snp	A/G	0	0			GRCh38.p7	2:233510083	CTGGGACAGAAATGG[A/G]AATCGTAGTAGAAGA	55230
rs2603545	snp	A/G	0.295343	0.245854			GRCh38.p7	2:233516405	tggccAGATGATAca[A/G]tattcttaagaggat	55230
rs2603546	snp	A/G	0.301252	0.24469			GRCh38.p7	2:233498514	ATTGTACTTTCGTAT[A/G]ATTACATTTATGTCA	55230
rs2603547	snp	C/T	0.392805	0.205199			GRCh38.p7	2:233485923	TGGTGAGAGGACCTA[C/T]GCCCCTGCCCTGGAC	55230
rs2924809	snp	C/T	0.283684	0.24772	utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233477063	CGTGAACCGCAGGTA[C/T]GGAGGCAGCGGCATG	55230
rs2971860	snp	A/C	0.475965	0.106957	downstream-variant-500B	USP40	GRCh38.p7	2:233475151	AAAAAGGGCCACAAA[A/C]GTTCCTTATTTTATT	55230
rs2971861	snp	C/G	0.366473	0.221211	utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233477013	GAGGAAAGTGGCTGG[C/G]CTGACCCCACACACC	55230
rs2971862	snp	A/G	0.347124	0.230363	utr-variant-3-prime, nc-transcript-variant	USP40	GRCh38.p7	2:233477372	GAGTTCATCGGGAGT[A/G]GAGCCGTGCAGCGGC	55230
rs2971863	snp	A/G	0.337391	0.234228	synonymous-codon, nc-transcript-variant	USP40	GRCh38.p7	2:233477488	GTAGCTGCTCTGCTC[A/G]TGGAGGGCTTCTTGG	55230
rs2971864	snp	A/G	0.390838	0.206555	intron-variant	USP40	GRCh38.p7	2:233479175	AGGGCCTGGGGAACT[A/G]TTGGATGTCTCCAAA	55230
rs2971865	snp	A/G	0.200182	0.244986	intron-variant	USP40	GRCh38.p7	2:233480043	AGTGATCATGTCAAC[A/G]CGTCCCCCTTCACAC	55230
rs2971866	snp	A/G	0.199873	0.244923	intron-variant	USP40	GRCh38.p7	2:233481968	GGGTCTGCGGGGTTC[A/G]TGCTGGGGGTTGCCC	55230
rs2971867	snp	A/G	0.380724	0.213099	intron-variant	USP40	GRCh38.p7	2:233483473	tccaacctgggtgac[A/G]gagtgagaccccatc	55230
rs3075063	in-del	-/AA	0.0425829	0.139564	intron-variant	USP40	GRCh38.p7	2:233494916	atatatatatatata[-/AA]TGCCATTTTGCTTGT	55230
rs3075066	in-del	-/ACACAC	0.5	0	intron-variant	USP40	GRCh38.p7	2:233491604	cacacacacacacac[-/ACACAC]GAGGAACAGGTTGGG	55230
rs3214824	in-del	-/C			intron-variant	USP40	GRCh38.p7	2:233481469	TCTTCTTGCCACCCC[-/C]GAGTTTGTTTTCATC	55230
rs3222859	microsatellite	(CA)15/16/17/20	0.495214	0.223572	intron-variant	USP40	GRCh38.p7	2:233479630	TGTTTAAAGGGCAGA[(CA)15/16/17/20]GNAAAANTCTATACG	55230
rs3796090	snp	A/G	0.32768	0.237625	intron-variant	USP40	GRCh38.p7	2:233481956	GCACGAACCCCGCAG[A/G]CCCTGCGCTGTGTCT	55230
rs3796091	snp	A/G	0	0	intron-variant	USP40	GRCh38.p7	2:233481928	TCTTTCCTGACACGC[A/G]CTTCCCTTCCTGGGT	55230
rs3796092	snp	G/T	0.234982	0.249549	intron-variant	USP40	GRCh38.p7	2:233481823	TGGGAAAGGGAGGAG[G/T]CTTGCCCAGTCACGG	55230
rs3816494	snp	A/G	0.00279162	0.0372561	intron-variant	USP40	GRCh38.p7	2:233481637	CTGTGCTTCTGGCGC[A/G]GCGATGAGAGATCCG	55230
rs3903176	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233488941	gaaagagaggaaaga[A/G]agagaagagagagac	55230
rs3903177	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233488961	aagagagagacgaga[A/G]agagagagaCAAAAG	55230
rs3903178	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233488969	gacgagagagagaga[A/G]aCAAAAGGCCTCAAG	55230
rs3903179	snp	A/G			intron-variant	USP40	GRCh38.p7	2:233488976	gagagagagaCAAAA[A/G]GCCTCAAGGCTGCTT	55230
rs3965792	snp	A/C			intron-variant	USP40	GRCh38.p7	2:233552310	CATTATAGTTGAATT[A/C]CTCAGTTTTTTTAGA	55230
rs3965793	snp	A/T	0.438868	0.163795	intron-variant	USP40	GRCh38.p7	2:233549254	ATGAAAACTATATCA[A/T]TATTTTTGTTCTTTT	55230
rs4047187	snp	C/G	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233538817	gttgcccaggctggt[C/G]ttgaacttctgggct	55230
rs4047188	snp	A/G	0.202959	0.245534	intron-variant	USP40	GRCh38.p7	2:233534354	GGCAATGGAGAAAGA[A/G]ATTTTTTTCTTCTTA	55230
rs4047189	snp	A/C	0.237014	0.249662	intron-variant	USP40	GRCh38.p7	2:233534303	GGATTGTGACTTAAC[A/C]CTTACTATGCTTTGA	55230
rs4047198	snp	C/G	0.254385	0.249962	intron-variant	USP40	GRCh38.p7	2:233546254	TGGACATCTCTTTTG[C/G]AGTTTTGTGCTCATT	55230
rs4047199	snp	C/T	0.261884	0.249717	intron-variant	USP40	GRCh38.p7	2:233545242	TTTTAAATCTCTTAT[C/T]CCGTTGTCATAAATT	55230
rs4047262	snp	A/C/G	0.0652144	0.168387	upstream-variant-2KB, intron-variant	USP40	GRCh38.p7	2:233565792	CTATTTTACACATAA[A/C/G]AAAACAGATTAACAT	55230
rs4233627	snp	C/T	0.294832	0.245947	intron-variant	USP40	GRCh38.p7	2:233528534	CTTAGTGCGGGTTGA[C/T]GACAGCCCCTCAGGC	55230
rs4588184	snp	C/T	0.0655868	0.168795	intron-variant	USP40	GRCh38.p7	2:233477797	AGAAACCTTCCTTTC[C/T]GTACTTTTTAAACGG	55230
rs4663226	snp	A/G	0	0	intron-variant	USP40	GRCh38.p7	2:233491766	aaatgcccaataaat[A/G]tttattTATAAGGAA	55230
rs4663684	snp	A/T	0.295343	0.245854	intron-variant	USP40	GRCh38.p7	2:233536724	GTCGAATACATAcag[A/T]tggtcctcagtatct	55230

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