SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4386 | snp | C/T | 0.440057 | 0.162414 | intron-variant | TOM1 | GRCh38.p7 | 22:35345178 | CTGGCCTTGTCTGGT[C/T]AACTTCGCGCCTCTG | 10043 |
rs4461 | snp | C/T | 0.497776 | 0.0332724 | intron-variant, utr-variant-5-prime, nc-transcript-variant, upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35299809 | GCGGGGCGGTGGCAC[C/T]GCGAAGCTCGACCAC | 10043 |
rs4462 | snp | A/G | 0.498652 | 0.0259235 | intron-variant | TOM1 | GRCh38.p7 | 22:35301399 | ATCGCTTGGCAGTAG[A/G]TCTCATAGGTGCTCA | 10043 |
rs4463 | in-del | -/A | 0.498673 | 0.0257246 | intron-variant | TOM1 | GRCh38.p7 | 22:35301811 | GGTGGGTGTGTGTCC[-/A]GGGGAGGGCAGGGGT | 10043 |
rs4464 | snp | A/G | 0.457853 | 0.138915 | intron-variant | TOM1 | GRCh38.p7 | 22:35304624 | GCTGGGACTACAGGC[A/G]CCCGCCACCACACCT | 10043 |
rs4465 | snp | C/T | 0.497613 | 0.0344622 | intron-variant | TOM1 | GRCh38.p7 | 22:35312797 | AGGAAGGGGGTACAG[C/T]TGACTGTGGCTGACG | 10043 |
rs4466 | snp | A/G | 0.229723 | 0.249176 | intron-variant | TOM1 | GRCh38.p7 | 22:35327838 | ATGCGCCAGCCACTG[A/G]TCTTGGGGAGCCAAG | 10043 |
rs4467 | snp | C/T | 0.219049 | 0.248077 | intron-variant, upstream-variant-2KB | TOM1, MIR3909 | GRCh38.p7 | 22:35335252 | CTAGATTATGGGATC[C/T]TCCCACTGACCCCAC | 10043 |
rs4509 | snp | C/T | 0.498459 | 0.0277128 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35298216 | ACCCAGTAACTAGCA[C/T]ATGAAAGCTTAAATA | 10043 |
rs4510 | snp | A/G | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35303460 | TGAGTGTATGGAAAC[A/G]TTAGCTCTTCCTGTC | 10043 |
rs4511 | snp | C/G | 0.480223 | 0.0974544 | intron-variant | TOM1 | GRCh38.p7 | 22:35320601 | CCCCACTCCCCCCAG[C/G]TGGTCCTTCCCATCT | 10043 |
rs6480 | in-del | -/CA | 0.499087 | 0.0213463 | intron-variant | TOM1 | GRCh38.p7 | 22:35314217 | GGAGGCTGTGGGACA[-/CA]TCTGCCCAGACCATC | 10043 |
rs6481 | in-del | -/GTGGA | 0 | 0 | intron-variant | TOM1 | GRCh38.p7 | 22:35305907 | GTGTTGGTTAGCAGA[-/GTGGA]CTAGACCAGGGTCAG | 10043 |
rs25015 | snp | C/T | 0.453697 | 0.14494 | intron-variant, downstream-variant-500B | TOM1, MIR6069 | GRCh38.p7 | 22:35336610 | GGGGTGTCCTTCCCC[C/T]GCTTTGTCCGCATCT | 10043 |
rs129433 | snp | C/T | 0.49121 | 0.0657086 | intron-variant | TOM1 | GRCh38.p7 | 22:35346531 | TGTCAGCCTTTCCCC[C/T]CCAGGGGTGAGGACC | 10043 |
rs133395 | snp | A/C | 0.34146 | 0.23267 | intron-variant | TOM1 | GRCh38.p7 | 22:35343934 | cacacacatctacac[A/C]caccacctacacaca | 10043 |
rs133396 | snp | C/T | 0.0352966 | 0.128072 | intron-variant | TOM1 | GRCh38.p7 | 22:35344281 | CCAGGCCCGGCCACC[C/T]GGAAAGCTGGGGGTG | 10043 |
rs133397 | snp | A/C | 0.32627 | 0.238082 | intron-variant | TOM1 | GRCh38.p7 | 22:35344449 | GTTGGCCCGGCCAGC[A/C]CAGCTTCCGCAGCTC | 10043 |
rs133398 | snp | A/G | 0.298638 | 0.245223 | intron-variant | TOM1 | GRCh38.p7 | 22:35345827 | ACAGCAGGAGGACCC[A/G]TTGTTCTCACCAAGA | 10043 |
rs133399 | snp | A/G | 0.428937 | 0.17459 | intron-variant | TOM1 | GRCh38.p7 | 22:35345870 | GGCCAGGGTAGACTT[A/G]TATAGCATATAGCAC | 10043 |
rs133400 | snp | A/G | 0.316726 | 0.240931 | downstream-variant-500B | TOM1 | GRCh38.p7 | 22:35348479 | AGGACTCCATGAGCC[A/G]CCCAGCTCAGAGGAG | 10043 |
rs138719 | in-del | -/AAAT | 0.497586 | 0.0346604 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35297380 | AGACTCTGTCTTTAA[-/AAAT]AAATAAATAAATAAA | 10043 |
rs138721 | snp | C/G | 0.492337 | 0.0614248 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35297751 | CTGGGCACGGTGGCT[C/G]ACACCTGTAATCACA | 10043 |
rs138722 | snp | A/G | 0.498437 | 0.0279115 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35297785 | CAAACAGGAAGTGGA[A/G]TCATAAACTCCATGC | 10043 |
rs138723 | snp | G/T | 0.495927 | 0.0449436 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35297837 | TTTTTGTTTTTTTTT[G/T]TTTTTTTTTTTTTTT | 10043 |
rs138725 | snp | G/T | 0.0803491 | 0.183626 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35297853 | TTTTTTTTTTTTTTT[G/T]TTTTTACCATGAATA | 10043 |
rs138726 | snp | A/G | 0.498437 | 0.0279115 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35298302 | GACTCGTGGGGGCAA[A/G]GGCATTTGTGAACAG | 10043 |
rs138727 | snp | A/C | 0.495368 | 0.0478996 | upstream-variant-2KB | TOM1 | GRCh38.p7 | 22:35298900 | AGAAAAGGTCATAAC[A/C]CATAGATAGGTATCT | 10043 |
rs138728 | snp | C/G | 0.581451 | 0.106738 | intron-variant | TOM1 | GRCh38.p7 | 22:35300084 | CTACACGCCAGCCTC[C/G]TTGCCCTCCCTGCCT | 10043 |
rs138729 | in-del | -/C | 0.498632 | 0.0261223 | intron-variant | TOM1 | GRCh38.p7 | 22:35300906 | CCATATAAAAAAAAA[-/C]AGTTGTAATATTTAT | 10043 |
rs138730 | snp | A/G | 0.483636 | 0.0889627 | intron-variant | TOM1 | GRCh38.p7 | 22:35300938 | ATCACTGGGCTGGGC[A/G]CGGTGGCTCCCGCCT | 10043 |
rs138732 | in-del | -/TATAT | 0.498908 | 0.0233371 | intron-variant | TOM1 | GRCh38.p7 | 22:35301315 | ACATACACATACATA[-/TATAT]TATATGTATTTACAC | 10043 |
rs138733 | snp | C/G | 0.494315 | 0.0530107 | intron-variant | TOM1 | GRCh38.p7 | 22:35301619 | AGGTTTCGCAAGACA[C/G]TAAGAATGGAAAATA | 10043 |
rs138734 | in-del | -/TTT | | | intron-variant | TOM1 | GRCh38.p7 | 22:35302350 | TTTTTTTTTTTTTTT[-/TTT]GAGACTGCGTTTCGC | 10043 |
rs138735 | snp | G/T | 0.498652 | 0.0259235 | intron-variant | TOM1 | GRCh38.p7 | 22:35302358 | TTTTTTTTTTGAGAC[G/T]GCGTTTCGCTCTTGT | 10043 |
rs138736 | snp | A/G | 0.495782 | 0.0457324 | intron-variant | TOM1 | GRCh38.p7 | 22:35302422 | CTCACTGCAACTTCC[A/G]CCTCCCGGGTTCAAG | 10043 |
rs138737 | in-del | -/G | 0.492727 | 0.0598633 | intron-variant | TOM1 | GRCh38.p7 | 22:35302463 | GCCTCAGCCTCCCAA[-/G]GTAGCCGGGATTACA | 10043 |
rs138738 | snp | A/G | 0.498652 | 0.0259235 | intron-variant | TOM1 | GRCh38.p7 | 22:35302498 | CGCTCCGCCACACCC[A/G]ACTAATTTTGTATTT | 10043 |
rs138739 | in-del | -/ACACACACAC | 0 | 0 | intron-variant | TOM1 | GRCh38.p7 | 22:35303149 | CACACACACACACAC[-/ACACACACAC]CCCTTTGTGCTTGCT | 10043 |
rs138740 | snp | C/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35303589 | tgcaacctctgcccc[C/T]caggttcaagtgatt | 10043 |
rs138741 | snp | C/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35303670 | tctctactaaaaata[C/T]aaaaattagccgggc | 10043 |
rs138742 | snp | C/T | 0.497722 | 0.0336691 | intron-variant | TOM1 | GRCh38.p7 | 22:35303766 | tcacacctgcaatcc[C/T]agcactttgggaggc | 10043 |
rs138743 | snp | C/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35303772 | ggtggctcacacctg[C/T]aatcccagcactttg | 10043 |
rs138744 | snp | C/T | 0.498652 | 0.0259235 | intron-variant | TOM1 | GRCh38.p7 | 22:35303890 | ACAGCTAGGCTGAAC[C/T]TCTTGAGAGCAGGAA | 10043 |
rs138745 | snp | A/G | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35304262 | AGAGCCACAACTCTT[A/G]TTCTACCCTCAGATA | 10043 |
rs138746 | snp | A/G | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35304474 | TACTGGATCTGTTTT[A/G]TTTTTTGTTTTTTGT | 10043 |
rs138747 | snp | A/T | 0.501825 | 0.040059 | intron-variant | TOM1 | GRCh38.p7 | 22:35304495 | TGTTTTTTGTTTTTT[A/T]TGAGACAGAGTCTCA | 10043 |
rs138748 | snp | G/T | 0.498754 | 0.0249289 | intron-variant | TOM1 | GRCh38.p7 | 22:35304526 | CTCTGTCGCCCAGGC[G/T]GGAGTGCAGTGGCGC | 10043 |
rs138749 | snp | A/G | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35304770 | GGCGTGAGCCACTGC[A/G]CCCGGCCTACTGGCT | 10043 |
rs138750 | snp | C/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35304774 | ACAGAGCCAGTAGGC[C/T]GGGTGCAGTGGCTCA | 10043 |
rs138751 | snp | A/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35304811 | GAAATGGAAAATGGG[A/T]TTCTTGATATCTGTC | 10043 |
rs138752 | snp | C/T | 0.498794 | 0.0245311 | intron-variant | TOM1 | GRCh38.p7 | 22:35305230 | GCAATGGAGAGGGAC[C/T]GTGACATAGTTAGGA | 10043 |
rs138753 | snp | C/T | 0.497722 | 0.0336691 | intron-variant | TOM1 | GRCh38.p7 | 22:35305433 | acctcgtgatccacc[C/T]gcctcggcctcccaa | 10043 |
rs138754 | snp | C/T | 0.0879971 | 0.190408 | intron-variant | TOM1 | GRCh38.p7 | 22:35305457 | acgaggtcaagaaat[C/T]gagaccatcctggcc | 10043 |
rs138755 | snp | A/G | 0.498794 | 0.0245311 | intron-variant | TOM1 | GRCh38.p7 | 22:35305580 | caggaaaattacttg[A/G]acctgggaggcgaag | 10043 |
rs138756 | snp | C/T | 0.497722 | 0.0336691 | intron-variant | TOM1 | GRCh38.p7 | 22:35305616 | agtgagccaagatca[C/T]gccgctgcactctag | 10043 |
rs138758 | snp | A/C | 0.498754 | 0.0249289 | intron-variant | TOM1 | GRCh38.p7 | 22:35305729 | ctgtaaccacacacc[A/C]tgcccttggagccct | 10043 |
rs138759 | snp | C/T | 0.498754 | 0.0249289 | intron-variant | TOM1 | GRCh38.p7 | 22:35305730 | cctgtaaccacacac[C/T]atgcccttggagccc | 10043 |
rs138760 | snp | A/C | 0.456685 | 0.140646 | intron-variant | TOM1 | GRCh38.p7 | 22:35306075 | tgtgcataaataaaa[A/C]tatttatgggcaatg | 10043 |
rs138761 | in-del | -/T | 0.498009 | 0.0314867 | intron-variant | TOM1 | GRCh38.p7 | 22:35306145 | TTATTCTTCTTCAGC[-/T]TTTTTTTTTCCCAAC | 10043 |
rs138762 | snp | A/T | 0.498774 | 0.02473 | intron-variant | TOM1 | GRCh38.p7 | 22:35306181 | aaaaatataaagacc[A/T]tctgtagctcgagta | 10043 |
rs138763 | in-del | -/C | 0.497722 | 0.0336691 | intron-variant | TOM1 | GRCh38.p7 | 22:35306748 | TTATCATTCCTGGGA[-/C]CCCAGTCTAAGTTAG | 10043 |
rs138764 | snp | C/T | 0.497445 | 0.0356514 | intron-variant | TOM1 | GRCh38.p7 | 22:35307135 | TCTTTACTGCCTTAC[C/T]AAGGAGATCTTGATC | 10043 |
rs138765 | snp | C/T | 0.498158 | 0.0302955 | intron-variant | TOM1 | GRCh38.p7 | 22:35307288 | TCATGGATATAATTA[C/T]ATAGGATGAGGTCAA | 10043 |
rs138766 | snp | A/C | 0.497151 | 0.037632 | intron-variant | TOM1 | GRCh38.p7 | 22:35307329 | ATGCAGGATAGGAAA[A/C]AAACACGAACATCAA | 10043 |
rs138767 | snp | C/T | 0.498133 | 0.030494 | intron-variant | TOM1 | GRCh38.p7 | 22:35307373 | GCAGGAGAGGAAAAA[C/T]TTAATGTCCCTCTAA | 10043 |
rs138768 | snp | A/T | 0.161924 | 0.233971 | intron-variant | TOM1 | GRCh38.p7 | 22:35307558 | GTCCCCCAGGTCTCC[A/T]CCTCAAGGGACACGG | 10043 |
rs138769 | snp | C/G | 0.498277 | 0.0293024 | intron-variant | TOM1 | GRCh38.p7 | 22:35308228 | CCTGTGTGTGTGTGT[C/G]TGtctgtctctctct | 10043 |
rs138770 | in-del | -/T | 0.499325 | 0.0183582 | intron-variant | TOM1 | GRCh38.p7 | 22:35308276 | CTAGTTCCTTTTCTC[-/T]TTTTTTTTTTTTTTC | 10043 |
rs138771 | snp | A/G | 0.478685 | 0.10101 | intron-variant | TOM1 | GRCh38.p7 | 22:35309366 | GAACTGAAAGAGGCC[A/G]GGCGCAGTGGCTCAC | 10043 |
rs138772 | in-del | -/A | | | intron-variant | TOM1 | GRCh38.p7 | 22:35309660 | AAAAAAAAAAAAAAA[-/A]GAGAGAGAACTGAGA | 10043 |
rs138773 | snp | C/G | 0.495291 | 0.0482933 | intron-variant | TOM1 | GRCh38.p7 | 22:35309949 | TTTAGCTTTTCTAGA[C/G]CCCCTTGCAGCCAGA | 10043 |
rs138774 | snp | A/G | 0.495782 | 0.0457324 | intron-variant | TOM1 | GRCh38.p7 | 22:35312806 | GTACAGCTGACTGTG[A/G]CTGACGCCAGCCCCT | 10043 |
rs138775 | snp | A/G | 0.495782 | 0.0457324 | intron-variant | TOM1 | GRCh38.p7 | 22:35313072 | TGGCCGGACACAGTG[A/G]GCAGTGGCTCACACC | 10043 |
rs138776 | in-del | -/TG | | | intron-variant | TOM1 | GRCh38.p7 | 22:35314218 | ATGGTCTGGGCAGAT[-/TG]GTCCCACAGCCTCCC | 10043 |
rs138777 | snp | C/T | 0.498632 | 0.0261223 | intron-variant | TOM1 | GRCh38.p7 | 22:35315105 | CCATTCTCCACACTG[C/T]CCAGAAGGAACTTTC | 10043 |
rs138778 | snp | C/T | 0.496348 | 0.0425753 | intron-variant | TOM1 | GRCh38.p7 | 22:35316139 | CAGGTGTGCCAAGGC[C/T]GGCAGGGTGGCTGCA | 10043 |
rs138779 | snp | C/T | 0.495963 | 0.0447464 | intron-variant | TOM1 | GRCh38.p7 | 22:35316184 | ACTTTGCATGTGACA[C/T]TTGCAGGGGAGGGAA | 10043 |
rs138780 | snp | C/T | 0.477345 | 0.103991 | intron-variant | TOM1 | GRCh38.p7 | 22:35316560 | GGCTGCAGGTCTGCA[C/T]GGTAGCAAGCACCGG | 10043 |
rs138781 | snp | C/T | 0.497091 | 0.0380279 | intron-variant | TOM1 | GRCh38.p7 | 22:35316621 | CCAGAACTCTGCAGC[C/T]GACTCCCGGCCTGGA | 10043 |
rs138782 | snp | A/C | 0 | 0 | intron-variant | TOM1 | GRCh38.p7 | 22:35320138 | CACCATCCCTGCCCT[A/C]TAGCAAGCTTCTTCT | 10043 |
rs138783 | in-del | -/A/AAAAAAAAAAAAAA/GAAAAAAAAAAAAA | 0.224412 | 0.248687 | intron-variant | TOM1 | GRCh38.p7 | 22:35320987 | GAAAAAAAAAAAAAA[lengthTooLong]CTTGAATGGAAGGGT | 10043 |
rs138784 | snp | A/G | 0.475789 | 0.107327 | intron-variant | TOM1 | GRCh38.p7 | 22:35321253 | TTCTCATGCTCCCCA[A/G]GGGTTTCTTATGCAT | 10043 |
rs138785 | snp | G/T | 0.494484 | 0.0522255 | intron-variant | TOM1 | GRCh38.p7 | 22:35328666 | TTAGCACGGGGACAG[G/T]GCGGGTGCCTTTCAA | 10043 |
rs138786 | snp | C/T | 0.49168 | 0.063958 | intron-variant | TOM1 | GRCh38.p7 | 22:35332473 | GACAAGGCCACGACT[C/T]GAACAGACCCCACAC | 10043 |
rs138787 | snp | C/T | 0.235564 | 0.249583 | intron-variant | TOM1 | GRCh38.p7 | 22:35332607 | ACACACACACACACA[C/T]ACACACACACAAATA | 10043 |
rs138788 | snp | A/G | 0.488965 | 0.0734569 | intron-variant, upstream-variant-2KB | TOM1, MIR3909 | GRCh38.p7 | 22:35333728 | AATCCTACCATCCTA[A/G]GATTGGCCCTCTACA | 10043 |
rs138789 | snp | A/C | 0.454544 | 0.143743 | intron-variant, upstream-variant-2KB | TOM1, MIR3909 | GRCh38.p7 | 22:35334092 | ATGGATAGCGTTTTG[A/C]CTGTTCTCTAACGCT | 10043 |
rs138790 | snp | A/G | 0.487241 | 0.0788465 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35336911 | GTGGGCAGGGGTGGC[A/G]AGGAGCTAAGCTTAG | 10043 |
rs138791 | in-del | -/T | 0.418007 | 0.185132 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35336943 | TTTTTTTTTTTTTTT[-/T]GAGCCGGAGTCTCGC | 10043 |
rs138792 | snp | A/G | 0.493568 | 0.0563433 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35337000 | GGCTGGAGTGCAGTG[A/G]CGCTTGCAGAGTGCA | 10043 |
rs138793 | snp | C/G | 0.491577 | 0.0643472 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35337343 | TAGAGACAGCAACAA[C/G]CACCTCCAGACCCTC | 10043 |
rs138794 | snp | C/T | 0.488485 | 0.0749998 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35337661 | CACATTTAACTCTTG[C/T]AATACCAGCTTGCTT | 10043 |
rs138795 | snp | A/G | 0.493107 | 0.0583 | intron-variant, upstream-variant-2KB | TOM1, MIR6069 | GRCh38.p7 | 22:35337715 | ACGCTAGTGAAGCGG[A/G]GCTGGTCTAACTGTA | 10043 |
rs377904 | snp | G/T | 0.498652 | 0.0259235 | intron-variant | TOM1 | GRCh38.p7 | 22:35303052 | ATTAGAATCACCATC[G/T]GAGGGATGTCAATTC | 10043 |
rs715514 | snp | A/G | 0.0988009 | 0.199095 | intron-variant | TOM1 | GRCh38.p7 | 22:35328822 | CGTGAGGCCACAGTC[A/G]GCAATGCCGGGCAGC | 10043 |
rs739015 | snp | A/G | 0.0663309 | 0.169604 | intron-variant | TOM1 | GRCh38.p7 | 22:35327725 | TCAGGACCCCTTACT[A/G]GGTGCTTTACTCTGT | 10043 |
rs743810 | snp | A/C | 0.408057 | 0.193696 | synonymous-codon, nc-transcript-variant | TOM1 | GRCh38.p7 | 22:35346932 | CTCTTCCGCATCATT[A/C]CCCTGGGAAGGTAGA | 10043 |
rs762913 | snp | A/G | 0.0399052 | 0.1355 | intron-variant | TOM1 | GRCh38.p7 | 22:35313772 | ACTGGGCACCTGTGC[A/G]TCCTTACAGCAGTCT | 10043 |
rs762967 | snp | A/G | 0.0839998 | 0.186933 | intron-variant | TOM1 | GRCh38.p7 | 22:35344873 | CACAGCCACCTGGAC[A/G]GTAAGTACTGCTGCT | 10043 |