DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome NCF4 3'UTR be94b9dd15 BA070538 NM_000631 chr22:35602061-35604008:+ NCF4 3'UTR fbfa673974 BA070539 NM_000631 chr22:35603812-35604008:+ NCF4 3'UTR 9421998ca1 NM_000631 chr22:35602061-35604008:+ NCF4 5'UTR be94b9dd15 CA109785 NM_000631 chr22:35586976-35587159:+ NCF4 5'UTR fbfa673974 CA109786 NM_000631 chr22:35586976-35587159:+

DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence NCF4; SH3PXD4 ATTTA 185-1204 1356-1360;1367-1371

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-NCF4.1 NM_013416Tchr22:37260086-37261114 expressed NCF4 4689 protein-coding + not_available

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT017337 hsa-miR-335-5p Homo sapiens NCF4 4689 Homo sapiens Microarray Functional MTI (Weak) 18185580

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000088 hsa-miR-30a* 4689 NCF4 cgacgUUUGUAGGCU-GACUUUc || |||:| | |||||| aaauaAACCAUUCCAUCUGAAAg 2 18 167 189 [hg19:22:37274032-37274054:+] 0.5260 129 6 -17.86 -0.3189 MIMAT0000088 hsa-miR-30a* 4689 NCF4 cgacgUUUGUAGGCU-GACUUUc || |||:| | |||||| aaauaAACCAUUCCAUCUGAAAg 2 18 385 407 [hg19:22:37274032-37274054:+] 0.5260 129 6 -17.86 -0.2853 MIMAT0004509 hsa-miR-93* 4689 NCF4 gcCCUUC-ACGAUCGAGU-CGUCa ||||| ||| | ||| |||| cuGGAAGCUGC-ACAUCACGCAGa 2 21 161 183 [hg19:22:37273808-37273830:+] 0.7954 125 0 -18.57 -0.9089 MIMAT0004516 hsa-miR-105* 4689 NCF4 aucguguacgaguuUGUAGGCa |||||:| ucuuucuacuauuuACAUCUGa 2 9 142 163 [hg19:22:37274007-37274028:+] 0.5141 124 0 -10.93 -0.1500 MIMAT0004516 hsa-miR-105* 4689 NCF4 aucguguacgaguuUGUAGGCa |||||:| ucuuucuacuauuuACAUCUGa 2 9 360 381 [hg19:22:37274007-37274028:+] 0.5141 124 0 -10.93 -0.1320 MIMAT0004551 hsa-miR-30d* 4689 NCF4 cgUCGUUU-GUAGACU-GACUUUc | :||| |||: | |||||| uaAAUAAACCAUUCCAUCUGAAAg 2 21 166 189 [hg19:22:37274031-37274054:+] 0.5260 123 6 -13.39 -0.3189 MIMAT0004551 hsa-miR-30d* 4689 NCF4 cgUCGUUU-GUAGACU-GACUUUc | :||| |||: | |||||| uaAAUAAACCAUUCCAUCUGAAAg 2 21 384 407 [hg19:22:37274031-37274054:+] 0.5260 123 6 -13.39 -0.2853 MIMAT0004556 hsa-miR-10b* 4689 NCF4 uaaGGGGAUCUU-AGC-UUAGACa ||| |:|:: |:| |||||| ggaCCCGUGGGGCUUGUAAUCUGu 2 20 117 140 [hg19:22:37273982-37274005:+] 0.5141 126 6 -22.42 -0.2090 MIMAT0004556 hsa-miR-10b* 4689 NCF4 uaaGGGGAUCUU-AGC-UUAGACa ||| |:|:: |:| |||||| ggaCCCGUGGGGCUUGUAAUCUGu 2 20 335 358 [hg19:22:37273982-37274005:+] 0.5141 126 6 -22.42 -0.1849 MIMAT0004557 hsa-miR-34a* 4689 NCF4 ucccgucauaugaacGACUAAc |||||| uucuacuauuuacauCUGAUUu 2 8 145 166 [hg19:22:37274010-37274031:+] 0.5141 120 6 -6.09 -0.1732 MIMAT0004557 hsa-miR-34a* 4689 NCF4 ucccgucauaugaacGACUAAc |||||| uucuacuauuuacauCUGAUUu 2 8 363 384 [hg19:22:37274010-37274031:+] 0.5141 120 6 -6.09 -0.1527 MIMAT0004589 hsa-miR-30b* 4689 NCF4 cuuCAUUUGUAGGUGGAGGGUc || ::| ||| ||||||| cucGU-GGCCUCC-CCUCCCAg 2 20 127 146 [hg19:22:37273774-37273793:+] 0.7954 151 7 -25.41 -0.2768 MIMAT0004609 hsa-miR-149* 4689 NCF4 cgUGUCGGGGGCAGGGAGGGa :::|||:| ||||||| ucGUGGCCUC---CCCUCCCa 2 20 128 145 [hg19:22:37273775-37273792:+] 0.7954 147 7 -27.73 -0.6733 MIMAT0002890 hsa-miR-299-5p 4689 NCF4 uacauacacccugccAUUUGGu |||||| uacaucugauuuaaaUAAACCa 2 8 155 176 [hg19:22:37274020-37274041:+] 0.5260 120 6 -7.21 -0.2618 MIMAT0002890 hsa-miR-299-5p 4689 NCF4 uacauacacccugccAUUUGGu |||||| uacaucugauuuaaaUAAACCa 2 8 373 394 [hg19:22:37274020-37274041:+] 0.5260 120 6 -7.21 -0.2328 MIMAT0000693 hsa-miR-30e* 4689 NCF4 cgacAUUU-GUAGGCU-GACUUUc |||| |||:| | |||||| uaaaUAAACCAUUCCAUCUGAAAg 2 19 166 189 [hg19:22:37274031-37274054:+] 0.5260 133 6 -17.54 -0.3189 MIMAT0000693 hsa-miR-30e* 4689 NCF4 cgacAUUU-GUAGGCU-GACUUUc |||| |||:| | |||||| uaaaUAAACCAUUCCAUCUGAAAg 2 19 384 407 [hg19:22:37274031-37274054:+] 0.5260 133 6 -17.54 -0.2853 MIMAT0000725 hsa-miR-373* 4689 NCF4 ccuuUCGCGGGGGUA-AAACUCa || ::||::| |||||| gggcAGACUUCCUGUCUUUGAGg 2 19 89 111 [hg19:22:37273954-37273976:+] 0.5141 122 6 -17.09 -0.2586 MIMAT0000725 hsa-miR-373* 4689 NCF4 ccuuUCGCGGGGGUA-AAACUCa || ::||::| |||||| gggcAGACUUCCUGUCUUUGAGg 2 19 307 329 [hg19:22:37273954-37273976:+] 0.5141 122 6 -17.09 -0.2299 MIMAT0004690 hsa-miR-379* 4689 NCF4 ucaaucaccugguacAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 139 160 [hg19:22:37274004-37274025:+] 0.5141 120 6 -6.92 -0.1556 MIMAT0004690 hsa-miR-379* 4689 NCF4 ucaaucaccugguacAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 357 378 [hg19:22:37274004-37274025:+] 0.5141 120 6 -6.92 -0.1369 MIMAT0000735 hsa-miR-380 4689 NCF4 uucuacaccugguauAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 139 160 [hg19:22:37274004-37274025:+] 0.5141 120 6 -6.92 -0.1556 MIMAT0000735 hsa-miR-380 4689 NCF4 uucuacaccugguauAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 357 378 [hg19:22:37274004-37274025:+] 0.5141 120 6 -6.92 -0.1369 MIMAT0009201 hsa-miR-196b* 4689 NCF4 cuuccGUCACAGC--ACGACAGCu ::|| ||| |||||||| ggaucUGGU-UCGGCUGCUGUCGg 2 18 74 96 [hg19:22:37273721-37273743:+] 0.7732 150 7 -20.38 -0.4424 MIMAT0004752 hsa-miR-20b* 4689 NCF4 gacCUUCACGGGUAUGAUGUCa |||| | || ||||||| gcaGAAG-G-ACA-ACUACAGg 2 20 179 197 [hg19:22:37273826-37273844:+] 0.7954 145 7 -15.79 -0.6275 MIMAT0002831 hsa-miR-519c-5p 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0002831 hsa-miR-519c-5p 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0005454 hsa-miR-519b-5p 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0005454 hsa-miR-519b-5p 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0005449 hsa-miR-523* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0005449 hsa-miR-523* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0002847 hsa-miR-518c* 4689 NCF4 gucUUUCACGAAG-GGAG-GUCUCu ||| |||| ||| ||||| agcAAAAACCUUCAGCUCUCAGAGg 2 21 35 59 [hg19:22:37273900-37273924:+] 0.4228 123 0 -18.79 -0.3454 MIMAT0002847 hsa-miR-518c* 4689 NCF4 gucuuucacgaaggGAGGUCUCu :||||||| ucacaaggcgggagUUCCAGAGa 2 10 16 38 [hg19:22:37272130-37272136,37273670-37273685:+] 0.7417 141 7 -19.82 -0.6636 MIMAT0002847 hsa-miR-518c* 4689 NCF4 gucUUUCACGAAG-GGAG-GUCUCu ||| |||| ||| ||||| agcAAAAACCUUCAGCUCUCAGAGg 2 21 253 277 [hg19:22:37273900-37273924:+] 0.4228 123 0 -18.79 -0.3617 MIMAT0005450 hsa-miR-518e* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0005450 hsa-miR-518e* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0005451 hsa-miR-522* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0005451 hsa-miR-522* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0005452 hsa-miR-519a* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 36 58 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.1889 MIMAT0005452 hsa-miR-519a* 4689 NCF4 gucUUUCGCGAAG-GGAGA-UCUc ||| | |||| |||| ||| gcaAAAAC-CUUCAGCUCUCAGAg 2 20 254 276 [hg19:22:37273901-37273923:+] 0.4228 120 0 -17.18 -0.2511 MIMAT0003217 hsa-miR-554 4689 NCF4 ugACCGACUCAGUCCUG-AUCg || | || | ||||| ||| gcUGUCGGA-UGAGGACGUAGc 2 20 89 109 [hg19:22:37273736-37273756:+] 0.7843 121 0 -19.64 -0.6074 MIMAT0003217 hsa-miR-554 4689 NCF4 ugaccGACUCAGUCCUG-AUCg | ||| ||||| ||| aguucCAGAGAGAGGACAUAGc 2 17 28 49 [hg19:22:37273675-37273696:+] 0.7732 120 0 -17.63 -0.6562 MIMAT0003222 hsa-miR-558 4689 NCF4 uaaaACCAUGUCGU-CGAGu ||||:|:||| |||| cucaUGGUGCGGCAGGCUCg 2 16 111 130 [hg19:22:37273758-37273777:+] 0.7954 131 0 -25.01 -0.1401 MIMAT0004794 hsa-miR-551b* 4689 NCF4 ccAGA--GUGGGUGCGAACUAAAg ||| :|:::|| : |||||| uuUCUACUAUUUACAUCUGAUUUa 2 21 144 167 [hg19:22:37274009-37274032:+] 0.5141 127 6 -9.87 -0.3131 MIMAT0004794 hsa-miR-551b* 4689 NCF4 ccAGA--GUGGGUGCGAACUAAAg ||| :|:::|| : |||||| uuUCUACUAUUUACAUCUGAUUUa 2 21 362 385 [hg19:22:37274009-37274032:+] 0.5141 127 6 -9.87 -0.2799 MIMAT0004796 hsa-miR-576-3p 4689 NCF4 cuAAGGUUAAAAAGGUGUAGAa ||:| | | || :|||||| ucUUUCUACUAUU-UACAUCUg 2 21 142 162 [hg19:22:37274007-37274027:+] 0.5141 142 6 -10.03 -0.2292 MIMAT0004796 hsa-miR-576-3p 4689 NCF4 cuAAGGUUAAAAAGGUGUAGAa ||:| | | || :|||||| ucUUUCUACUAUU-UACAUCUg 2 21 360 380 [hg19:22:37274007-37274027:+] 0.5141 142 6 -10.03 -0.2032 MIMAT0003249 hsa-miR-584 4689 NCF4 gaGUCAGGGUCCGUUUGGUAuu | | :::| :||||||| auCUGAUUUAAAUAAACCAUuc 3 21 158 179 [hg19:22:37274023-37274044:+] 0.5260 132 0 -12.13 -0.1198 MIMAT0003249 hsa-miR-584 4689 NCF4 gaGUCAGGGUCCGUUUGGUAuu | | :::| :||||||| auCUGAUUUAAAUAAACCAUuc 3 21 376 397 [hg19:22:37274023-37274044:+] 0.5260 132 0 -12.13 -0.1051 MIMAT0003264 hsa-miR-596 4689 NCF4 gggcuCCUCGGCCCGUCCGAa || || |||||||| cucauGGUGC--GGCAGGCUc 2 17 111 129 [hg19:22:37273758-37273776:+] 0.7954 149 7 -21.93 -0.1178 MIMAT0004813 hsa-miR-411* 4689 NCF4 ccaaucaccuggcacAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 139 160 [hg19:22:37274004-37274025:+] 0.5141 120 6 -4.02 -0.1556 MIMAT0004813 hsa-miR-411* 4689 NCF4 ccaaucaccuggcacAAUGUAu |||||| gucucuuucuacuauUUACAUc 2 8 357 378 [hg19:22:37274004-37274025:+] 0.5141 120 6 -4.02 -0.1369 MIMAT0003882 hsa-miR-767-5p 4689 NCF4 guacGAGUCUGUUGGUACCACGu | :|| |: :|||||||| aggaCGUAG-CGCUCAUGGUGCg 2 20 100 121 [hg19:22:37273747-37273768:+] 0.7843 153 7 -22.44 -0.2117 MIMAT0005797 hsa-miR-1301 4689 NCF4 cuucAGUGAGGGUCCGUCGACGUu || : ||| || ||||||| cgccUCUUCCCCUGGAAGCUGCAc 2 21 150 173 [hg19:22:37273797-37273820:+] 0.7954 164 7 -21.04 -0.7064 MIMAT0003888 hsa-miR-766 4689 NCF4 cgacuccgacacccCGACCUCa ||||||| -------aagaccuGCUGGAGc 2 9 1 15 [hg19:22:37272115-37272129:+] 0.7102 140 7 -12.33 -0.1109 MIMAT0010364 hsa-miR-761 4689 NCF4 acacagucaaagugGGACGACg ||||||| ----------aagaCCUGCUGg 2 9 1 12 [hg19:22:37272115-37272126:+] 0.7102 140 7 -14.67 -0.1184 MIMAT0004982 hsa-miR-939 4689 NCF4 guggggGUCUCGGAGUC-GAGGGGu |||: :| ::| |||||| gugcggCAGGCUCGUGGCCUCCCCu 2 19 117 141 [hg19:22:37273764-37273788:+] 0.7954 122 6 -23.63 -0.1708 MIMAT0005592 hsa-miR-1237 4689 NCF4 gacccccugccuCGUCUUCCu |||||||| gcugcacaucacGCAGAAGGa 2 10 167 187 [hg19:22:37273814-37273834:+] 0.7954 145 7 -18.02 -0.8989 MIMAT0005887 hsa-miR-1299 4689 NCF4 aggGAGUGU---G-UCUUAAGGUCUu |||||| | :||:||||||| gagCUCACAAGGCGGGAGUUCCAGAg 2 20 12 37 [hg19:22:37272126-37272136,37273670-37273684:+] 0.7417 161 7 -27.04 -0.2128 MIMAT0005904 hsa-miR-1253 4689 NCF4 acgUCCGACUAGAAGA-AGAGa :|||| :| ||| |||| gugGGGCUUGUAAUCUGUCUCu 2 19 123 144 [hg19:22:37273988-37274009:+] 0.5141 122 0 -16.48 -0.9886 MIMAT0005904 hsa-miR-1253 4689 NCF4 acgUCCGACUAGAAGA-AGAGa :|||| :| ||| |||| gugGGGCUUGUAAUCUGUCUCu 2 19 341 362 [hg19:22:37273988-37274009:+] 0.5141 122 0 -16.48 -0.9482 MIMAT0011158 hsa-miR-2115 4689 NCF4 agguaguccucaGUACCUUCGa | ||||||| agcgccucuuccCCUGGAAGCu 2 11 148 169 [hg19:22:37273795-37273816:+] 0.7954 142 7 -15.24 -0.3156 MIMAT0011159 hsa-miR-2115* 4689 NCF4 gaucggagguacuuaAGACUAc |||||| uuucuacuauuuacaUCUGAUu 2 8 144 165 [hg19:22:37274009-37274030:+] 0.5141 120 6 -9.07 -0.1434 MIMAT0011159 hsa-miR-2115* 4689 NCF4 gaucggagguacuuaAGACUAc |||||| uuucuacuauuuacaUCUGAUu 2 8 362 383 [hg19:22:37274009-37274030:+] 0.5141 120 6 -9.07 -0.1261 MIMAT0014983 hsa-miR-3121 4689 NCF4 acAGGAAACGGAUGA-GAUAAAu ||: | |:| || |||||| aaUCUGUCUCUUUCUACUAUUUa 2 21 134 156 [hg19:22:37273999-37274021:+] 0.5141 124 6 -13.59 -0.9889 MIMAT0014983 hsa-miR-3121 4689 NCF4 acAGGAAACGGAUGA-GAUAAAu ||: | |:| || |||||| aaUCUGUCUCUUUCUACUAUUUa 2 21 352 374 [hg19:22:37273999-37274021:+] 0.5141 124 6 -13.59 -0.9485 MIMAT0015031 hsa-miR-3157 4689 NCF4 ucUGACGUGAU-CGG-AC-CGACUu || ||| | ||| || ||||| cuACAACACGAUGCCAUGAGCUGAc 2 21 200 224 [hg19:22:37273847-37273871:+] 0.6087 122 0 -17.59 -0.2270 MIMAT0015034 hsa-miR-3160 4689 NCF4 acccgaaagaucaGAGUCGAGa :||||||| accagcaaaaaccUUCAGCUCu 2 10 32 53 [hg19:22:37273897-37273918:+] 0.4228 141 7 -13.76 -0.1196 MIMAT0015034 hsa-miR-3160 4689 NCF4 acccgaaagaucaGAGUCGAGa :||||||| accagcaaaaaccUUCAGCUCu 2 10 250 271 [hg19:22:37273897-37273918:+] 0.4228 141 7 -13.76 -0.2841 MIMAT0015046 hsa-miR-3171 4689 NCF4 cuauauaugucuaagguAUGUAGa |||||| ugucucuuucuacuauuUACAUCu 2 8 138 161 [hg19:22:37274003-37274026:+] 0.5141 120 6 -8.74 -0.1498 MIMAT0015046 hsa-miR-3171 4689 NCF4 cuauauaugucuaagguAUGUAGa |||||| ugucucuuucuacuauuUACAUCu 2 8 356 379 [hg19:22:37274003-37274026:+] 0.5141 120 6 -8.74 -0.1318 MIMAT0015063 hsa-miR-3183 4689 NCF4 agGCUCGCUGAGG-CUCUCUCCg ||:| | :||| |||||||| ggCGGGAG-UUCCAGAGAGAGGa 2 21 22 43 [hg19:22:37272136-37272136,37273670-37273690:+] 0.7417 161 7 -30.09 -0.7952 MIMAT0015076 hsa-miR-3192 4689 NCF4 aaGGUGACGAUGUUGGAGGGUCu :|:: || | |||||||| gcUCGUGGCCUC-CCCUCCCAGa 2 22 126 147 [hg19:22:37273773-37273794:+] 0.7954 147 7 -23.57 -0.3959 MIMAT0015082 hsa-miR-3197 4689 NCF4 gcGGAAAGGCUCGGACGCGGAGg || ||| || ||||||| cuCCCCUCCCAG-AAGCGCCUCu 2 22 135 156 [hg19:22:37273782-37273803:+] 0.7954 151 7 -24.13 -0.9679 MIMAT0016863 hsa-miR-4311 4689 NCF4 guGUGAGUCGAGAGAAAg :| || | ||||||| ugUAAUCUG-UCUCUUUc 2 17 131 147 [hg19:22:37273996-37274012:+] 0.5141 146 7 -12.09 -0.5633 MIMAT0016863 hsa-miR-4311 4689 NCF4 guGUGAGUCGAGAGAAAg :| || | ||||||| ugUAAUCUG-UCUCUUUc 2 17 349 365 [hg19:22:37273996-37274012:+] 0.5141 146 7 -12.09 -0.5166 MIMAT0016868 hsa-miR-4314 4689 NCF4 gaCAGGGUAAAGGGUCUc | |:| ||||||| ugGCCUCCCCUCCCAGAa 2 17 131 148 [hg19:22:37273778-37273795:+] 0.7954 144 7 -16.74 -0.3139 MIMAT0016875 hsa-miR-4323 4689 NCF4 agACUCCGACACCCCGAc ||: | |||||||| aaUGGACCCGUGGGGCUu 2 17 114 131 [hg19:22:37273979-37273996:+] 0.5141 152 7 -17.90 -0.1643 MIMAT0016875 hsa-miR-4323 4689 NCF4 agACUCCGACACCCCGAc ||: | |||||||| aaUGGACCCGUGGGGCUu 2 17 332 349 [hg19:22:37273979-37273996:+] 0.5141 152 7 -17.90 -0.1448 MIMAT0016901 hsa-miR-4271 4689 NCF4 gggguggaaaAGAAGGGGg |||||||| cagaagcgccUCUUCCCCu 2 10 144 162 [hg19:22:37273791-37273809:+] 0.7954 145 7 -21.50 -0.3963 MIMAT0016909 hsa-miR-4279 4689 NCF4 cuucggccCUCCUCUc ||||||| agcucucaGAGGAGAu 2 9 48 63 [hg19:22:37273913-37273928:+] 0.5434 140 7 -12.59 -0.6707 MIMAT0016909 hsa-miR-4279 4689 NCF4 cuucggccCUCCUCUc ||||||| agcucucaGAGGAGAu 2 9 266 281 [hg19:22:37273913-37273928:+] 0.5434 140 7 -12.59 -0.5670 MIMAT0016924 hsa-miR-4330 4689 NCF4 cguuccGAGACUAGACUcc :|: |||||| cuacuaUUUACAUCUGAuu 3 14 147 165 [hg19:22:37274012-37274030:+] 0.5141 121 0 -6.59 -0.1201 MIMAT0016924 hsa-miR-4330 4689 NCF4 cguuccGAGACUAGACUcc :|: |||||| cuacuaUUUACAUCUGAuu 3 14 365 383 [hg19:22:37274012-37274030:+] 0.5141 121 0 -6.59 -0.1053 MIMAT0000253 hsa-miR-10a 4689 NCF4 guGUUUAAGCCUAGAUGUCCCAu ||:| | ||||||||| cgCAGAAGGACAACUACAGGGUc 2 22 178 200 [hg19:22:37273825-37273847:+] 0.7954 153 7 -24.30 -1.0478 MIMAT0000254 hsa-miR-10b 4689 NCF4 guguuuaagccaaGAUGUCCCAu ||||||||| cgcagaaggacaaCUACAGGGUc 2 11 178 200 [hg19:22:37273825-37273847:+] 0.7954 150 7 -22.50 -1.0478 MIMAT0000271 hsa-miR-214 4689 NCF4 ugacggacagacacGGACGACa ||||||| ----------aagaCCUGCUGg 2 9 1 12 [hg19:22:37272115-37272126:+] 0.7102 140 7 -13.62 -0.1184 MIMAT0000416 hsa-miR-1 4689 NCF4 uauguaugaagaaauGUAAGGu |||||| cugauuuaaauaaacCAUUCCa 2 8 160 181 [hg19:22:37274025-37274046:+] 0.5260 120 6 -9.06 -0.1905 MIMAT0000416 hsa-miR-1 4689 NCF4 uauguaugaagaaauGUAAGGu |||||| cugauuuaaauaaacCAUUCCa 2 8 378 399 [hg19:22:37274025-37274046:+] 0.5260 120 6 -9.06 -0.1683 MIMAT0000430 hsa-miR-138 4689 NCF4 gccggacuaagugUUGUGGUCGa :|||||||| ggagcagugagggGACACCAGCa 2 11 16 38 [hg19:22:37273881-37273903:+] 0.3707 146 7 -19.02 -0.2785 MIMAT0000430 hsa-miR-138 4689 NCF4 gccggacuaagugUUGUGGUCGa :|||||||| ggagcagugagggGACACCAGCa 2 11 234 256 [hg19:22:37273881-37273903:+] 0.3707 146 7 -19.02 -0.2139 MIMAT0000434 hsa-miR-142-3p 4689 NCF4 agGUAUUUCAUCCU-UUG-UGAUGu ||| | | || | :|| ||||| caCAUCACGCAGAAGGACAACUACa 2 22 171 195 [hg19:22:37273818-37273842:+] 0.7954 124 0 -15.79 -0.7941 MIMAT0000462 hsa-miR-206 4689 NCF4 ggugugugaaggaauGUAAGGu |||||| cugauuuaaauaaacCAUUCCa 2 8 160 181 [hg19:22:37274025-37274046:+] 0.5260 120 6 -9.56 -0.1923 MIMAT0000462 hsa-miR-206 4689 NCF4 ggugugugaaggaauGUAAGGu |||||| cugauuuaaauaaacCAUUCCa 2 8 378 399 [hg19:22:37274025-37274046:+] 0.5260 120 6 -9.56 -0.1699 MIMAT0000703 hsa-miR-361-5p 4689 NCF4 cauggggaccucuaAGACUAuu |||||| uucuacuauuuacaUCUGAUuu 3 9 145 166 [hg19:22:37274010-37274031:+] 0.5141 120 0 -6.74 -0.1470 MIMAT0000703 hsa-miR-361-5p 4689 NCF4 cauggggaccucuaAGACUAuu |||||| uucuacuauuuacaUCUGAUuu 3 9 363 384 [hg19:22:37274010-37274031:+] 0.5141 120 0 -6.74 -0.1293 MIMAT0000738 hsa-miR-383 4689 NCF4 ucGGUGUUAGUGGAAGACUAGa |:|| ||: | ||||||: uuCUACUAUUUACAUCUGAUUu 2 21 145 166 [hg19:22:37274010-37274031:+] 0.5141 144 0 -16.51 -0.1456 MIMAT0000738 hsa-miR-383 4689 NCF4 ucGGUGUUAGUGGAAGACUAGa |:|| ||: | ||||||: uuCUACUAUUUACAUCUGAUUu 2 21 363 384 [hg19:22:37274010-37274031:+] 0.5141 144 0 -16.51 -0.1280 MIMAT0000773 hsa-miR-346 4689 NCF4 ucuCCGUCCGUACGCCCGUCUGu || ||| || |||||||| ccuGGGAGG-AU--GGGCAGACu 2 21 78 97 [hg19:22:37273943-37273962:+] 0.5141 155 7 -26.26 -0.1609 MIMAT0000773 hsa-miR-346 4689 NCF4 ucuCCGUCCGUACGCCCGUCUGu || ||| || |||||||| ccuGGGAGG-AU--GGGCAGACu 2 21 296 315 [hg19:22:37273943-37273962:+] 0.5141 155 7 -26.26 -0.1416 MIMAT0002875 hsa-miR-504 4689 NCF4 cuaUC-UCACGUCUG--GUCCCAGa || || || || ||||||| cgcAGAAGGACA-ACUACAGGGUCu 2 20 178 201 [hg19:22:37273825-37273848:+] 0.7954 143 7 -20.93 -1.1873 MIMAT0003281 hsa-miR-613 4689 NCF4 ccGUUUCUUCCUUGUAAGGa :||| || | |||||| uuUAAAUAA--ACCAUUCCa 2 19 164 181 [hg19:22:37274029-37274046:+] 0.5260 123 6 -6.48 -0.1852 MIMAT0003281 hsa-miR-613 4689 NCF4 ccGUUUCUUCCUUGUAAGGa :||| || | |||||| uuUAAAUAA--ACCAUUCCa 2 19 382 399 [hg19:22:37274029-37274046:+] 0.5260 123 6 -6.48 -0.1635 MIMAT0003329 hsa-miR-411 4689 NCF4 gcaugcgauaugccAGAUGAu |||||| guaaucugucucuuUCUACUa 2 8 132 152 [hg19:22:37273997-37274017:+] 0.5141 120 6 -10.92 -0.1069

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G004923 NCF4 Homo sapiens 4689 12036891 -75 -50 R13569; HS$NCF4_02; Binding factors: PU.1-isoform1 // 70 95 R13570; HS$NCF4_03; Binding factors: PU.1-isoform1

DNA & RNA Element - miRWalk Gene Name miRNAname Entrez ID Pathways NCF4 hsa-miR-335-5p 4689 hsa04670_Leukocyte transendothelial migration

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End NCF4; SH3PXD4 1 192 100 5.01 + chr22 37273865 37274057 NCF4; SH3PXD4 193 194 0.2 5.01 + chr22 37274057 37274059

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile NCF4 hsa-miR-10b beg:182 end:200 pic:3' GTGTTTAAGCCAA--GATGTCCCAT 5'& || ||||||||| &5' ---------GGACAACTACAGGGT- 3' NCF4 bkv-miR-B1-5p beg:258 end:276 pic:3' TACGAGAAGGGT-TC-AGAGTCTA 5'& ||. || ||||||| &5' --------CCTTCAGCTCTCAGA- 3' NCF4 hsa-miR-1237 beg:176 end:188 pic:3' GACCCCCTGCCTCGTCTTCCT 5'& ||||||||| &5' ------------GCAGAAGGA 3' NCF4 hiv1-miR-TAR-5p beg:22 end:41 pic:3' AGTCTAGACCAGATTGGTCTCTCT 5'& || ||||||||| &5' --------GGGAGTTCCAGAGAGA 3' NCF4 hsa-miR-504 beg:182 end:202 pic:3' CTATCTCACGTCTG-----GTCCCAGA 5'& .||| |||||||| &5' ----------GGACAACTACAGGGTCT 3' NCF4 hsa-miR-214 beg:0 end:11 pic:3' TGACGGACAGACAC-GGACGACA 5'& | ||||||| &5' -------------GACCTGCTG- 3' NCF4 hsa-miR-4271 beg:147 end:163 pic:3' GGGGTGGAAAAGAAGGGGG 5'& |.|| ||||||||. &5' ---CGCC---TCTTCCCCT 3' NCF4 ebv-miR-BART20-5p beg:32 end:54 pic:3' CCTTACTTCTGTA-CG-GACGAT 5'& ||. ||.||||| || ||| &5' -GAGAGAGGACATAGCTCTG--- 3' NCF4 ebv-miR-BART21-3p beg:173 end:194 pic:3' TTTGTG-GTCACCCGTGTTGATC 5'& ||| ||| || ||||||| &5' ---CACGCAGAAGG-ACAACTA- 3' NCF4 hsa-miR-596 beg:113 end:129 pic:3' GGGCTCCTCGGCCCGTCCGAA 5'& || || |||||||| &5' -----GGTGC--GGCAGGCT- 3' NCF4 hsa-miR-196bstar beg:77 end:97 pic:3' CTTCCGTCACAGCACGACAGCT 5'& ||. | | ||||||||. &5' ---GGTTCGG-C-TGCTGTCGG 3' NCF4 hsa-miR-346 beg:296 end:315 pic:3' TCTCCGTCCGTACGCCCGTCTGT 5'& || ||| .|||||||| &5' ---GGGAGGA---TGGGCAGAC- 3' NCF4 hcmv-miR-UL148D beg:296 end:308 pic:3' GCCACTTCTTCCCCTCCTGCT 5'& |||||||.|. &5' -----------GGGAGGATGG 3' NCF4 hcmv-miR-UL148D beg:92 end:105 pic:3' GCCACTTCTTCCC-CTCCTGCT 5'& || ||||||| &5' ----------GGATGAGGACG- 3' NCF4 hcmv-miR-UL36star beg:287 end:304 pic:3' CGTGCAACTTTTGTGGACCTTT 5'& |.||| ||||||.|. &5' -------GGAAA-ACCTGGGAG 3' NCF4 hcmv-miR-US25-2-5p beg:390 end:410 pic:3' AGT-AGGTGGACTTG-TCTGGCGA 5'& || ||||.||||| .|.| &5' -CATTCCATCTGAAAGGGGC---- 3' NCF4 hsa-let-7a-2star beg:287 end:313 pic:3' CCTTTC-GATCCTCCGACATGTC 5'& ||||| ||.||||| || ||| &5' GGAAAACCTGGGAGGATGGGCAG 3' NCF4 hsa-miR-10a beg:177 end:200 pic:3' GTGTTTAAGCCTA--GATGTCCCAT 5'& |.||.| ||| ||||||||| &5' CGCAGAA--GGACAACTACAGGGT- 3' NCF4 hsa-miR-1180 beg:167 end:188 pic:3' TGTGTGGGTGCGCTCGGCCTTT 5'& .|||| .||||| || ||| &5' GCACA-TCACGC-AGAAGGA-- 3' NCF4 hsa-miR-1202 beg:150 end:174 pic:3' GAGGGGGTGACG-TCGACCGTG 5'& |||..|| ||| |||| |||| &5' CTCTTCCCCTGGAAGCT-GCAC 3' NCF4 hsa-miR-1206 beg:201 end:221 pic:3' CGAATTTGTAG-AT-GTACTTGT 5'& |||| |. |||||.| &5' -----AACACGATGCCATGAGC- 3' NCF4 hsa-miR-1208 beg:226 end:244 pic:3' AGGCGGACAGACTTGTCACT 5'& .| |||| ||.|||||| &5' -TC-CCTG---GAGCAGTGA 3' NCF4 hsa-miR-1225-3p beg:332 end:350 pic:3' GACCCCCGCC-GTGT-CCCCGAGT 5'& || | |. ||||||. &5' --------GGACCCGTGGGGCTT- 3' NCF4 hsa-miR-1237 beg:58 end:77 pic:3' GACCCCCTGCCTCGTCTTCCT 5'& |||||| | ||..||| &5' ----GGGACGCTG-AGGGGGA 3' NCF4 hsa-miR-1274a beg:59 end:78 pic:3' ACC-GCGGACTTGTCCCTG 5'& || || ||||. .||||. &5' -GGACG-CTGAG-GGGGAT 3' NCF4 hsa-miR-1299 beg:16 end:38 pic:3' AGGGAGTGTG----TCTTAAGGTCTT 5'& |||| .||.|||||||. &5' -----CACAAGGCGGGAGTTCCAGAG 3' NCF4 hsa-miR-1301 beg:151 end:173 pic:3' CTTCAGTGAGGGT-CCGTCGACGTT 5'& || .|||| || ||||||| &5' ----TC-TTCCCCTGGAAGCTGCA- 3' NCF4 hsa-miR-138 beg:232 end:256 pic:3' GC-CGG-ACTAAGTGTTGTGGTCGA 5'& | || ||| . .|||||||| &5' -GAGCAGTGAG--GGGACACCAGC- 3' NCF4 hsa-miR-1468 beg:324 end:338 pic:3' GTCGCTTTGTCCGTTTGCCTC 5'& |||| ||.||| &5' ---------AGGCTAATGGA- 3' NCF4 hsa-miR-146b-3p beg:181 end:200 pic:3' GGTCTTGACTCAGGTGTCCCGT 5'& ||.|| |.||||||. &5' --AGGACAA---CTACAGGGT- 3' NCF4 hsa-miR-15astar beg:116 end:137 pic:3' ACTCCGTCGTGTTATACCGGAC 5'& || ||||| .| .|||||| &5' TGCGGCAG-GCTC-GTGGCCT- 3' NCF4 hsa-miR-185 beg:352 end:368 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |||.| |||.||.| &5' -------CTGTC--TCTTTCTA 3' NCF4 hsa-miR-1910 beg:113 end:135 pic:3' TC-CGCCGTCCGTGTCCTGACC 5'& .| ||||||||| |. |.| &5' GGTGCGGCAGGCTCGTGGC--- 3' NCF4 hsa-miR-1976 beg:10 end:30 pic:3' TGTCGTTCCTC-------CCGTCCTCC 5'& |||| |||.|||| &5' -------GGAGCTCACAAGGCGGGAG- 3' NCF4 hsa-miR-2114star beg:335 end:351 pic:3' TTCAGGGAACGAACTCCGAGC 5'& ||| ||.||||.| &5' ----CCCG----TGGGGCTTG 3' NCF4 hsa-miR-2117 beg:26 end:46 pic:3' GACAGGAACCGTTTCTCTTGT 5'& ||.| | |.||||.||| &5' --GTTCCA-G-AGAGAGGACA 3' NCF4 hsa-miR-219-1-3p beg:248 end:272 pic:3' GCCCTGCAGGTCT-------GAGTTGAGA 5'& |||| .|||.|||| &5' --------CCAGCAAAAACCTTCAGCTCT 3' NCF4 hsa-miR-27astar beg:11 end:33 pic:3' ACGAGTGTT-CGTCGATTCGGGA 5'& |||||||| ||.| .||..| &5' -GCTCACAAGGCGG--GAGTTC- 3' NCF4 hsa-miR-2909 beg:34 end:55 pic:3' GGTTCTCTACAAC--CGGGATTG 5'& .||||| ||.||.| &5' --GAGAGAGGACATAGCTCTGA- 3' NCF4 hsa-miR-296-5p beg:57 end:80 pic:3' TGTCCTA--ACTCCCCCCCGGGA 5'& |.||| |||||||| |. &5' -CGGGACGCTGAGGGGGATCT-- 3' NCF4 hsa-miR-30astar beg:164 end:187 pic:3' CGACGTTTGTAG-GCTGACTTTC 5'& ||||| ||||| || | |||.| &5' GCTGC--ACATCACG-CAGAAGG 3' NCF4 hsa-miR-3126-5p beg:343 end:364 pic:3' ACGAAGACCGTAGACAGGGAGT 5'& |||| | |||||||.||. &5' -GCTTGTA--ATCTGTCTCTT- 3' NCF4 hsa-miR-3140 beg:130 end:151 pic:3' TGATGGACTTAAGGGTTTTCGA 5'& .||| |||||.|||| &5' ---GCCTCCCCTCCCAGAAGC- 3' NCF4 hsa-miR-3160 beg:260 end:272 pic:3' ACCCGAAAGATCAGAGTCGAGA 5'& .|||||||| &5' -------------TTCAGCTCT 3' NCF4 hsa-miR-3183 beg:21 end:43 pic:3' AGGCTCGCTGAGG-CTCTCTCCG 5'& ||.| | .||| |||||||| &5' --CGGGAG-TTCCAGAGAGAGG- 3' NCF4 hsa-miR-323b-5p beg:164 end:193 pic:3' ACGCTTGAGTGGTG------CCTGTTGGA 5'& || .| ||.||| |||||||. &5' -GCT-GCACATCACGCAGAAGGACAACT- 3' NCF4 hsa-miR-325 beg:1 end:11 pic:3' TGTGAATGACCTGTGGATGATCC 5'& ||||.||.| &5' -------------ACCTGCTGG- 3' NCF4 hsa-miR-330-5p beg:17 end:39 pic:3' CGGATTCTG-TGTCCGGGTCTCT 5'& |||.| . || ||||||| &5' ----AAGGCGGGAGTTCCAGAGA 3' NCF4 hsa-miR-338-3p beg:0 end:14 pic:3' GTTGTTTTAGTGACT--ACGACCT 5'& || ||||||| &5' -------------GACCTGCTGGA 3' NCF4 hsa-miR-376astar beg:180 end:204 pic:3' ATGAGTATCTTCCT--------CTTAGATG 5'& ||||||| |..||||| &5' -------AGAAGGACAACTACAGGGTCTAC 3' NCF4 hsa-miR-383 beg:362 end:385 pic:3' TCGGTGTT-AGTGGAAGACTAGA 5'& |.|| |.|| ||||||.| &5' --CTACTATTTACA-TCTGATTT 3' NCF4 hsa-miR-423-3p beg:63 end:89 pic:3' TGACTCCCCGGAGTCTGGCTCGA 5'& .|||||||| || | . .||| &5' GCTGAGGGGGATCTGGTTCGGCT 3' NCF4 hsa-miR-4253 beg:1 end:18 pic:3' TGGGGGACCTGTACGGGA 5'& |||. ||||| ||.| &5' ACCTGCTGGA---GCTC- 3' NCF4 hsa-miR-4255 beg:351 end:370 pic:3' AGGTAGAGACTTGTGAC 5'& ||..||||| .||| &5' TCTGTCTCTTTCTACT- 3' NCF4 hsa-miR-4265 beg:2 end:21 pic:3' GGGTCTCGA-CTCGGGTGTC 5'& || ||| ||||.|||| &5' -CCT--GCTGGAGCTCACA- 3' NCF4 hsa-miR-4273 beg:165 end:190 pic:3' GACAGGTAG----TC-TCTTGTG 5'& ||| |||| || ||.||| &5' CTGCACATCACGCAGAAGGACA- 3' NCF4 hsa-miR-4273 beg:26 end:47 pic:3' GAC-AGGTAG-TCTCTTGTG 5'& | |||| ||||.|||. &5' --GTTCCAGAGAGAGGACAT 3' NCF4 hsa-miR-4274 beg:77 end:93 pic:3' GTCCCCCTCCCTGACGAC 5'& || |.|||||| &5' -----GGTTCGGCTGCTG 3' NCF4 hsa-miR-4278 beg:144 end:165 pic:3' GTTCCCGTTT-GGGGGATC 5'& ||| || .|||||.| &5' -AAGCGCCTCTTCCCCTGG 3' NCF4 hsa-miR-4291 beg:2 end:12 pic:3' TCGACAAGGACGACTT 5'& |||||||.| &5' -------CCTGCTGGA 3' NCF4 hsa-miR-4296 beg:5 end:21 pic:3' ACTCGGACTCGGGTGTA 5'& ||. ||||.|||| &5' ---GCTGGAGCTCACA- 3' NCF4 hsa-miR-4300 beg:260 end:274 pic:3' CTTCATCAGGTCGAGGGT 5'& |.||||||.|| &5' -------TTCAGCTCTCA 3' NCF4 hsa-miR-4305 beg:63 end:82 pic:3' CTTGAC-CTCCACAGATCC 5'& .||| |.|| |||.| &5' --GCTGAGGGGGATCTGG- 3' NCF4 hsa-miR-4306 beg:352 end:368 pic:3' ATGACGGAAAGAGAGGT 5'& |||.| |||.||.| &5' --CTGTC--TCTTTCTA 3' NCF4 hsa-miR-4311 beg:351 end:366 pic:3' GTGTGAGTCGAGAGAAAG 5'& || | |||||||| &5' -----TCTG-TCTCTTTC 3' NCF4 hsa-miR-4312 beg:182 end:201 pic:3' ACCCCTGTCCTTGTTCCGG 5'& ||||| |||.||.| &5' ---GGACAACTACAGGGTC 3' NCF4 hsa-miR-4314 beg:133 end:148 pic:3' GACAGGGTAAAGGGTCTC 5'& |||| ||||||| &5' ---TCCCC--TCCCAGA- 3' NCF4 hsa-miR-4320 beg:160 end:177 pic:3' TCCTTCGATGTCTTAGGG 5'& |||||||.|| ||| &5' -GGAAGCTGCAC-ATC-- 3' NCF4 hsa-miR-4322 beg:2 end:21 pic:3' GGGGTGCGCGACTCGGGTGTC 5'& || .|| ||||.|||| &5' --CC-TGCTG-GAGCTCACA- 3' NCF4 hsa-miR-4323 beg:332 end:349 pic:3' AGACTCCGA--CACCCCGAC 5'& || |||||||| &5' -----GGACCCGTGGGGCT- 3' NCF4 hsa-miR-432star beg:59 end:82 pic:3' TCTGTACCTCCTCGGTAGGTC 5'& .|||. ||||.| ||| | &5' GGACGCTGAGGGGG-ATCTGG 3' NCF4 hsa-miR-452star beg:83 end:102 pic:3' GTGAATGAAGAAACGTCTACTC 5'& .|| || |.|||||| &5' -----GCTGCTGT-CGGATGAG 3' NCF4 hsa-miR-493 beg:246 end:267 pic:3' GGACCGTGTGTCATC--TGGAAGT 5'& | ||| ||| ||||||| &5' ---GACAC-CAGCAAAAACCTTCA 3' NCF4 hsa-miR-516a-3p beg:393 end:410 pic:3' TGGG-AGACTTTCCTTCGT 5'& .|| ||||||||| .|| &5' -TCCATCTGAAAGG-GGC- 3' NCF4 hsa-miR-516b beg:17 end:37 pic:3' TTTCACGAAGAATGGAGGTCTA 5'& ||| || | .|||||| &5' -AAG-GCGGG--AGTTCCAGA- 3' NCF4 hsa-miR-516bstar beg:393 end:410 pic:3' TGGG-AGACTTTCCTTCGT 5'& .|| ||||||||| .|| &5' -TCCATCTGAAAGG-GGC- 3' NCF4 hsa-miR-575 beg:312 end:332 pic:3' CGAGGACAGGTTGACCGAG 5'& .|||||||. |||| &5' -TTCCTGTCTTTGAGGCT- 3' NCF4 hsa-miR-576-3p beg:360 end:380 pic:3' CTAAGGTTAAAAAGGTGTAGAA 5'& |||.| |..|||||| &5' --TTCTACTA--TTTACATCT- 3' NCF4 hsa-miR-583 beg:341 end:365 pic:3' CATTACCCTGGAA-------GGAGAAAC 5'& ||||.|.| .|||||| &5' ----TGGGGCTTGTAATCTGTCTCTTT- 3' NCF4 hsa-miR-596 beg:293 end:317 pic:3' GGGCTCCTCG-GCCCGTCCGAA 5'& ||.| |||| .|||||| ||| &5' CCTG-GGAGGATGGGCAGACTT 3' NCF4 hsa-miR-614 beg:292 end:311 pic:3' GGTGGACCGTTCTTGTCCGCAAG 5'& |||||| .||.|..||| &5' --ACCTGG-GAGGATGGGC---- 3' NCF4 hsa-miR-629star beg:287 end:307 pic:3' CGACCCGAATGCAACCCTCTTG 5'& || || ||||||.|. &5' ----GGAAAACC-TGGGAGGAT 3' NCF4 hsa-miR-637 beg:251 end:275 pic:3' TGCGTCTCGGGCTTTCGGGGGTCA 5'& ||| | || |||.|.||| &5' --GCAAAAACCTTCAGCTCTCAG- 3' NCF4 hsa-miR-671-5p beg:134 end:155 pic:3' GAGGTCGGGGAGGTCC-CGAAGGA 5'& |||| ||.| |||| || ||| &5' CTCC--CCTC-CCAGAAGCG-CCT 3' NCF4 hsa-miR-675star beg:232 end:255 pic:3' ACTCGCCACTCCCGTAT-GTC 5'& |||| ||||||| | ||| &5' -GAGCAGTGAGGGGACACCAG 3' NCF4 hsa-miR-767-3p beg:293 end:314 pic:3' TCTTTGGTACCC-CATACTCGTCT 5'& |||| |||| | |||.||||| &5' ---AACC-TGGGAGGATGGGCAGA 3' NCF4 hsa-miR-767-5p beg:99 end:121 pic:3' GTACGAGTCTGT----TG-GTACCACGT 5'& .|||. .| |||||||| &5' -------GGACGTAGCGCTCATGGTGC- 3' NCF4 hsa-miR-920 beg:258 end:273 pic:3' ATGACGAAGGT-GTCGAGGGG 5'& || ||||||.| &5' --------CCTTCAGCTCTC- 3' NCF4 hsv1-miR-H5-3p beg:34 end:55 pic:3' GGC-CTCCCAAACCTAGAGACTG 5'& | |||| |||||| &5' --GAGAGGACATAG--CTCTGA- 3' NCF4 kshv-miR-K12-12star beg:140 end:162 pic:3' AGTTGGTCC-CGTGG-GAGGGGGT 5'& |||| ||.|| ||.|||| &5' ----CCAGAAGCGCCTCTTCCCC- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 NCF4; SH3PXD4 hsa-miR-129 36 43 ------------------CGUU-CGGGUCUGG---CGUUUUUC |||: | :||| ||||||| GCUGACGGUGUCCCUGGAGCAGUGAGGGGACACCAGCAAAAAC NCF4; SH3PXD4 hsa-miR-133a 65 72 U----------------GUCGACCAACUUC-----CCCUGGUU ||||| ||:| |||||||: ACACCAGCAAAAACCUUCAGCUCUCAGAGGAGAUUGGGACCAGG NCF4; SH3PXD4 hsa-miR-133b 65 72 A-----------------UCGACCAACUUC-----CCCUGGUU |||| ||:| |||||||: ACACCAGCAAAAACCUUCAGCUCUCAGAGGAGAUUGGGACCAGG NCF4; SH3PXD4 hsa-miR-346 90 97 UCUCCG--------------------UCCGUAC-GCCCGUCUGU ||||| :|| | :|||||||| AGAGGAGAUUGGGACCAGGAAAACCUGGGAG-GAUGGGCAGACU NCF4; SH3PXD4 hsa-miR-129 16 44 CGUUCGGG-----UCUGG---CGUUUUUC :||| :||| ||||||| -GGAGCAGUGAGGGGACACCAGCAAAAAC NCF4; SH3PXD4 hsa-miR-133a 4 38 -UGUCG-----ACCA----ACUUCCCC-UGGUU- ||:|: ||| |||:||| ||||: GACGGUGUCCCUGGAGCAGUGAGGGGACACCAGC NCF4; SH3PXD4 hsa-miR-133b 13 38 AUCGACCA----ACUUCCCC-UGGUU- |||| |||:||| ||||: --CCUGGAGCAGUGAGGGGACACCAGC NCF4; SH3PXD4 hsa-miR-138 26 39 CUAAGUGUUGUGGUCGA : :|||||||| ----GGGGACACCAGCA NCF4; SH3PXD4 hsa-miR-145 55 94 -UUCC-CUAA-------------GGACCCUUUUGACCUG- :||| |||| |||||||::| |||:| AGAGGAGAUUGGGACCAGGAAAACCUGGGAGGA-UGGGCA NCF4; SH3PXD4 hsa-miR-149 57 75 CCUCACUUCUGUGCCUCGGUCU- |:|||: ||| ||||: ----AGGAGAUUGGGA-CCAGGA NCF4; SH3PXD4 hsa-miR-150 61 88 GUGACCAUGUUCCCA----ACCCUCU- |:||| || ||| ||||||: GAUUGGGACCAGGAAAACCUGGGAGGA NCF4; SH3PXD4 hsa-miR-154 55 83 GCUUCCGUUGUGCCUA------UUGGAU- :||| :|: ||| |||||: -AGAGGAGAUUGGGACCAGGAAAACCUGG NCF4; SH3PXD4 hsa-miR-188 172 193 -UGG-GAGGUGGUACGUUCCCUAC ||| :||||:| || |||||: AACCAUUCCAUC-UGAAAGGGG-- NCF4; SH3PXD4 hsa-miR-18a* 71 96 -UCU------UCCUCGUGAAUCCCGUCA :|| :|||| |: |||||| AGGAAAACCUGGGAGGAU---GGGCAGA NCF4; SH3PXD4 hsa-miR-191* 3 25 CCCCUGCUUUAGGU-UCGCGUCG- |||| :||| :| ||||: --UGACGGUGUCCCUGGAGCAGUG NCF4; SH3PXD4 hsa-miR-196b 82 104 GGUUGUUGUCC-UUUGAUGGAU- :| :|::|| |:||| |||: -GGAGGAUGGGCAGACUUCCUGU NCF4; SH3PXD4 hsa-miR-200a 4 26 -UGUAGCAAUGGUCU-GUCACAAU || :|| |::|| ||||| GACGGUGUCCCUGGAGCAGUGA-- NCF4; SH3PXD4 hsa-miR-205 5 31 -GUCUGAGGCCACCU---UACUUCCU- |:| ||| |||| :|||:||: ACGGUGUCCC-UGGAGCAGUGAGGGGA NCF4; SH3PXD4 hsa-miR-217 1 26 UAGGUUAGUCAA--GGACUACGUCAU- |::| |:|| ||||: |||||: -GCUGA-CGGUGUCCCUGGAGCAGUGA NCF4; SH3PXD4 hsa-miR-224 113 134 AUUUGCCUUGGUGAUCACUGAAC- ||:||| ||: |:| |:|||| -UAAUGGACCCG-UGG-GGCUUGU NCF4; SH3PXD4 hsa-miR-299-5p 63 81 UACAUACACCCUG--CCAUUUGGU |||||| || ||||| ------UUGGGACCAGGAAAACCU NCF4; SH3PXD4 hsa-miR-30e-3p 169 191 CGACAUUUGU--AGGCUGACUUUC- ||||| ||| ||||||| ---AUAAACCAUUCCAUCUGAAAGG NCF4; SH3PXD4 hsa-miR-324-3p 6 26 GGUCGUCGUGGACCCCGUCACC | |: ||||| |||||| --CGGUGUCCCUGGAGCAGUGA NCF4; SH3PXD4 hsa-miR-324-5p 67 93 UGUGGUUACG--GGAUCC-CCUACGC- ||||: |||:|| ||||| | -GACCAGGAAAACCUGGGAGGAUGGGC NCF4; SH3PXD4 hsa-miR-328 4 38 -UGCCUU-----CC-CGUCUCUCCC----GGUC- |||| || |||| ||||| |||| GACGGUGUCCCUGGAGCAGUGAGGGGACACCAGC NCF4; SH3PXD4 hsa-miR-331 102 131 AAGA---UCC---UAUCCGGGU-CCCCG- ||| ||| ||:| |||: ||||| GUCUUUGAGGCUAAUGGACCCGUGGGGCU NCF4; SH3PXD4 hsa-miR-339 7 31 ACUCGAGGACCUC--CUGUCCCU- | |: ||||||| | ||||: GGUGUCCCUGGAGCAGUGAGGGGA NCF4; SH3PXD4 hsa-miR-340 48 76 CCGAUA--UUUCAUUGACUCUG--CCU- ||| :|:| :|:||:||| ||| AGCUCUCAGAGGAGAUUGGGACCAGGAA NCF4; SH3PXD4 hsa-miR-342 3 29 -CUGCCCACGCUAAAGACA----CACUCU- ||| ||||: ||| |||||: UGAC-GGUGUCC---CUGGAGCAGUGAGGG NCF4; SH3PXD4 hsa-miR-346 80 98 UCUCCGUCCGUACGCCCGUCUGU || ||| :|||||||| --UGGGAGGA---UGGGCAGACU NCF4; SH3PXD4 hsa-miR-378 4 28 -UGUGUCCUGGACCUCAGUC-CUC- ||: | ||||||| ||| ||| GACGGUGUCCCUGGAG-CAGUGAGG NCF4; SH3PXD4 hsa-miR-409-3p 24 49 -UCCCCAAGUGGCUCGU---UGUAAGC ||||| |||| |||| || ||| GAGGGGA-CACC-AGCAAAAACCUUCA NCF4; SH3PXD4 hsa-miR-412 109 130 UGCCGAUCACCUGGUCCACUUCA ||||| |||||| ||| | -AGGCUAAUGGACCC-GUGGGGC NCF4; SH3PXD4 hsa-miR-423 22 53 GACUCCCCG--GAGUC-----UGGC--UCGA- ||||||| | ||| ||| |||| GUGAGGGGACAC-CAGCAAAAACCUUCAGCUC NCF4; SH3PXD4 hsa-miR-425-3p 84 104 -CC-GCCUGUGCUGUAAGGGCUA || :||:|| ||| ||||:| AGGAUGGGCA-GAC-UUCCUGU- NCF4; SH3PXD4 hsa-miR-432 30 59 GGUGG--GUUACUGGA---UGAGGUUCU- |||| ||| |||| :|||: ||| ACACCAGCAAAAACCUUCAGCUCUCAGAG NCF4; SH3PXD4 hsa-miR-450 25 44 AUAAUCCUUGUGUAGCGUUUUU- :||:|||| ||||||| ---AGGGGACACCA-GCAAAAAC NCF4; SH3PXD4 hsa-miR-452* 43 68 -GAAGAAAC--GUCUACUCUGACU- |||| |||| ||||:||: CCUUCAGCUCUCAGAGGAGAUUGGG NCF4; SH3PXD4 hsa-miR-453 72 101 GCUUGAGUGGUGCCUG--------UUGGAG- ||| ||| ||| :||:|| GGAAA--ACCUGGGAGGAUGGGCAGACUUCC NCF4; SH3PXD4 hsa-miR-484 79 104 UAGCCCUCC--CCUGACUC--GGACU :|||||| ||:| || |||| -CUGGGAGGAUGGGCAGACUUCCUGU NCF4; SH3PXD4 hsa-miR-493-3p 13 50 -GACCGUGUGUCA-UC---------------UGGAAGU- |||| :|||| || ||||||| CCUGGA--GCAGUGAGGGGACACCAGCAAAAACCUUCAG NCF4; SH3PXD4 hsa-miR-510 21 63 ACACUAAC----GG--------------UGAGAGGA--CUCAU |||| | || :||||| ||| AGUGAGGGGACACCAGCAAAAACCUUCAGCUCUCAGAGGAGA- NCF4; SH3PXD4 hsa-miR-518c* 33 61 -GUC-UUUCACGAAGG-GAG-GUCUCU- ||| ||| |||| ||| |||||: CCAGCAAAAACCUUCAGCUCUCAGAGGA NCF4; SH3PXD4 hsa-miR-519e 76 95 UGUGAGAUUUUCCU--CCGUGAAA || ||:::|||| |||| -AAC-CUGGGAGGAUGGGCAG--- NCF4; SH3PXD4 hsa-miR-519e* 3 32 -CUUUCACGAGGGAAAA-------CCUCUU || :||| ||||| ||:|| UGACGGUG-UCCCUGGAGCAGUGAGGGGAC NCF4; SH3PXD4 hsa-miR-524* 82 112 -CUCUU-UCA--C-GAAGGG---AAACAUC- |||:| :| | |||||: |||| || GGAGGAUGGGCAGACUUCCUGUCUUUG-AGG NCF4; SH3PXD4 hsa-miR-525 3 21 UCUUUCACGUAGGGAGACCUC- || :|||: || |||||| UGACGGUGU---CC-CUGGAGC NCF4; SH3PXD4 hsa-miR-526c 17 60 -UUGUCUUUCGC---------------GAAGG-GAGA-UCUC |:||| :|| | |||| |||| |||| GAGCAGUGAGGGGACACCAGCAAAAACCUUCAGCUCUCAGAGG NCF4; SH3PXD4 hsa-miR-542-5p 2 19 GAGCACUGUACUACUAGGGGCU- |||| |:|| ||||:|: ---CUGAC--GGUG-UCCCUGGA NCF4; SH3PXD4 hsa-miR-572 6 33 ACC-CGGUGG----CGG--CUCGCCUG- || |:| || || ||| |||| CGGUGUC-CCUGGAGCAGUGAGGGGACA NCF4; SH3PXD4 hsa-miR-581 13 38 UGACUAGA----UCUCUUGUGUUCU |||: ||:|:|||| || CCUGGAGCAGUGAGGGGACACCAGC NCF4; SH3PXD4 hsa-miR-583 85 110 CAUUACCCUG--GAAGG--AGAAAC- :||||| ||||| |||||| -GGAUGGGCAGACUUCCUGUCUUUGA NCF4; SH3PXD4 hsa-miR-593 1 22 CGACUCGUUACGGACCGACCACGGA ||||| |::||:| |||| || GCUGA-CGGUGUCC--CUGGAGCA- NCF4; SH3PXD4 hsa-miR-596 77 100 -GGGCUCCUCG-GCCCGUCCGAA- ||:| |||| :|||||| ||| ACCUG-GGAGGAUGGGCAGACUUC NCF4; SH3PXD4 hsa-miR-597 4 35 -UGUCACCA-------GUAGCUCA-CUGUGU ||:||| || :||| ||||| GACGGUGUCCCUGGAGCAGUGAGGGGACACC NCF4; SH3PXD4 hsa-miR-602 88 127 -CCCGGCGUC--GACAG-------------C-GGGCACAG |||| ||||| | |||||| UGGGCAGACUUCCUGUCUUUGAGGCUAAUGGACCCGUGG- NCF4; SH3PXD4 hsa-miR-609 15 36 -UCUC--UACUCUCUUUGUGGGA :||| :|||| |::||||| UGGAGCAGUGAG-GGGACACCA- NCF4; SH3PXD4 hsa-miR-610 32 54 AGGGUCGUG--UGUAAAUCGAGU |||||| || || ||||| -ACCAGCAAAAACCUUCAGCUCU NCF4; SH3PXD4 hsa-miR-615 107 134 UCUCCC----UCUGGG---UCCGAGCCU |||| :||||| :||||:| UGAGGCUAAUGGACCCGUGGGGCUUGU- NCF4; SH3PXD4 hsa-miR-629 62 90 CGACCCGAAUGCA------ACCCUCUUG- :|||| | ||||||:|: AUUGGGACCA-GGAAAACCUGGGAGGAUG NCF4; SH3PXD4 hsa-miR-631 48 75 -CGA----CUCCA--GACCC-GGUCCAGA ||| |||| :|||| ||||| AGCUCUCAGAGGAGAUUGGGACCAGGA-- NCF4; SH3PXD4 hsa-miR-632 10 35 -AGGG----UGUCCUUCGUCUGUG- |||| :||| :|| :||||| GUCCCUGGAGCAGUGAGGGGACACC NCF4; SH3PXD4 hsa-miR-639 4 27 -UGUCGCGAGCGUUGGCGUCGCUA ||:|:|: | | ||||:|| GACGGUGUCC-CUGGAGCAGUGAG NCF4; SH3PXD4 hsa-miR-641 82 109 -CUCCA--CUGAGAU-AGGAUACAGAAA- |||| |:| ||| ||||||| GGAGGAUGGGCAGACUUCC--UGUCUUUG NCF4; SH3PXD4 hsa-miR-657 77 106 -GGAUCUCUCCCACUCUU-----GGACGG- |||:| |||| ||:| ||||:| ACCUGG-GAGGAUGGGCAGACUUCCUGUCU NCF4; SH3PXD4 hsa-miR-661 108 131 UGCGCGUCCGGUC-UCUGGG---UCCGU ||||:| :||||| :||| -----GAGGCUAAUGGACCCGUGGGGCU NCF4; SH3PXD4 hsa-miR-662 99 130 -GACG---AC-CCGGUGUU----GCACCCU- |||: || |||:| ||||||: CCUGUCUUUGAGGCUAAUGGACCCGUGGGGC NCF4; SH3PXD4 hsa-miR-671 41 82 -UGGAGGUCGGGGA--------------GGUCCCGAAGGA ||||:||||:|: ||||| ||| AACCUUCAGCUCUCAGAGGAGAUUGGGACCAGGAAAACCUG NCF4; SH3PXD4 hsa-miR-767-3p 64 97 UCUUUGGU--------ACCC-CAUACUCGUCU- |::|||| |||| | |||:||||| UGGGACCAGGAAAACCUGGGAGGAUGGGCAGAC NCF4; SH3PXD4 hsa-miR-767-5p 110 131 GUACGAG--UCUGUUGGUACCACGU ||| :||| ||:||| || --GGCUAAUGGAC--CCGUGGGGCU NCF4; SH3PXD4 hsa-miR-801 5 25 CAGCUA-AGGCGUGCGUCUCGUUAG ||:| ||| | :|||||:| -ACGGUGUCC-CU---GGAGCAGUG NCF4; SH3PXD4 hsa-miR-133a 46 72 uGUCGA----C-CAACUUCCCCUGGUu ||||| | | || ||||||| tCAGCTCTCAGAGGAGATTGGGACCAg NCF4; SH3PXD4 hsa-miR-133a 16 34 ugUCGACCAACUUCCCCUGguu ||| | || ||||||| ggAGCAG--TG-AGGGGACacc NCF4; SH3PXD4 hsa-miR-133b 47 72 aUCGA----C-CAACUUCCCCUGGUu |||| | | || ||||||| cAGCTCTCAGAGGAGATTGGGACCAg NCF4; SH3PXD4 hsa-miR-133b 17 34 aUCGACCAACUUCCCCUGguu ||| | || ||||||| gAGCAG--TG-AGGGGACacc NCF4; SH3PXD4 hsa-miR-138 22 38 cuaaguguUGUGGUCGa |||||||| gtgaggggACACCAGCa NCF4; SH3PXD4 hsa-miR-145 56 84 uUCC-CUAA----GGACCCUUUUGACCug ||| |||| || || ||| |||| gAGGAGATTGGGACCAGGAAAACCTGGga NCF4; SH3PXD4 hsa-miR-149 53 73 ccUCACUUCUGUGCCUCGGUCu || |:|||: :||: |||| tcAGAGGAGAT-TGGGACCAGg NCF4; SH3PXD4 hsa-miR-154 61 81 gcuuCCGUUGUGCCUAUUGGAu || | || ||| ||||| gattGGGACCA-GGAAAACCTg NCF4; SH3PXD4 hsa-miR-188 173 192 UGG-GAGGUGGUACGUUCCCuac ||| :||||:| || ||||| ACCATTCCATC-TGAAAGGGg-- NCF4; SH3PXD4 hsa-miR-18a* 78 95 ucuuCCUCGUGAAUCCCGUCa |||| |: |||||| cctgGGAGGAT---GGGCAGa NCF4; SH3PXD4 hsa-miR-191* 1 23 cccCUGCUUUA-GGUUCGCGUCg ||||: :| || :| |||| gctGACGGTGTCCCTGGAGCAGt NCF4; SH3PXD4 hsa-miR-196b 81 102 gguUGUUGUCC-UUUGAUGGAu | :|::|| |:||| ||| gggAGGATGGGCAGACTTCCTg NCF4; SH3PXD4 hsa-miR-200a 5 27 UGUAGCAAUGGUCU-GUCACaau ||: :|| |::|| ||||| ACGGTGTCCCTGGAGCAGTGagg NCF4; SH3PXD4 hsa-miR-205 8 29 guCUGAGGCCACCUUACUUCCu | | |:|| | |:|||:|| gtGTCCCTGGAGCAGTGAGGGg NCF4; SH3PXD4 hsa-miR-224 112 132 auUUGCCUUGGUGAUCACUGAAC ||:||| ||:: | |:|||| ctAATGGACCCGT--GGGGCTTG NCF4; SH3PXD4 hsa-miR-299-5p 57 80 uacauacACCCUG--CCAUUUGGu |||||| || ||||| aggagatTGGGACCAGGAAAACCt NCF4; SH3PXD4 hsa-miR-30e-3p 166 189 cgacAUUU-GU-AGGCUGACUUUC |||| || ||| ||||||| taaaTAAACCATTCCATCTGAAAG NCF4; SH3PXD4 hsa-miR-324-3p 5 25 gGUCGUCGUGGACCCCGUCACc |:|: |: ||||| |||||| aCGGT-GTCCCTGGAGCAGTGa NCF4; SH3PXD4 hsa-miR-324-5p 66 91 ugUGGU--UACGGGAUCC-CCUACgc |||| | |||:|| ||||| ggACCAGGAAAACCTGGGAGGATGgg NCF4; SH3PXD4 hsa-miR-328 5 36 UGCCUU-----CC-CGUCUCUCCC----GGUC |||| : || |||| ||||| |||| ACGGTGTCCCTGGAGCAGTGAGGGGACACCAG NCF4; SH3PXD4 hsa-miR-331 105 129 AAGAUCC---UAUCCGGGU-CCCCG ||: ||| ||:| |||: ||||| TTTGAGGCTAATGGACCCGTGGGGC NCF4; SH3PXD4 hsa-miR-342 4 29 CUGCC-CACG---CUAAAGACACACUCu ||||| || | || | ||| |:| GACGGTGTCCCTGGA--GCAGTGAGGGg NCF4; SH3PXD4 hsa-miR-346 78 97 ucuCCGUCCGUACGCCCGUCUGu || ||| || |||||||| cctGGGAGG-AT--GGGCAGACt NCF4; SH3PXD4 hsa-miR-378 5 29 UGUGUCCUGGACC---UCAGUCCUC ||: | ||||| ||| |||:| ACGGTGTCCCTGGAGCAGTGAGGGG NCF4; SH3PXD4 hsa-miR-409-3p 25 48 UCCCCAAGUGGCUCG---UUGUAAGc ||||| |||| ||| ||| ||| AGGGG-ACACC-AGCAAAAACCTTCa NCF4; SH3PXD4 hsa-miR-412 108 129 ugCCGAUCACCUGGUCCACUUCa ||||| |||||| |||::| gaGGCTAATGGACC-CGTGGGGc NCF4; SH3PXD4 hsa-miR-425-3p 85 104 CC-GCCUGUGCUGUAAGGGCua || :||:|| ||| ||||:| GGATGGGCA-GAC-TTCCTGtc NCF4; SH3PXD4 hsa-miR-450 22 42 auaauCCUUGUGUAG-CGUUUUU ||:|||| | ||||||| gtgagGGGACAC--CAGCAAAAA NCF4; SH3PXD4 hsa-miR-452* 44 66 GAAG--AAACGUCUACUCUGACu |||| | |||| ||||:|| CTTCAGCTCTCAGAGGAGATTGg NCF4; SH3PXD4 hsa-miR-453 61 81 gcuugagUGGUGCCUGUUGGAg |||| ||| ||||| gattgggACCA-GGAAAACCTg NCF4; SH3PXD4 hsa-miR-484 103 133 uagccCUCC-----CCUG---A-CUCGGACu |||| |||| | |:||:|| tctttGAGGCTAATGGACCCGTGGGGCTTGt NCF4; SH3PXD4 hsa-miR-493-3p 25 48 gaCCGUGU-GUC--AUCUGGAAGU || ||| ||| | ||||||| agGGGACACCAGCAAAAACCTTCA NCF4; SH3PXD4 hsa-miR-510 58 85 aCACUAAC---GGU--GAGAGGACUCau | ||||| ||| ||||:| gGAGATTGGGACCAGGAAAACCTGGGag NCF4; SH3PXD4 hsa-miR-518c* 34 59 GUC-UUUCACGAAG-GGAG-GUCUCu ||| ||| |||| ||| ||||| CAGCAAAAACCTTCAGCTCTCAGAGg NCF4; SH3PXD4 hsa-miR-519e 75 99 UGUGAGAUUUUCCU--CCG--UGAAa | || ||:::|||| ||| |||| AAAC-CTGGGAGGATGGGCAGACTTc NCF4; SH3PXD4 hsa-miR-519e* 4 21 CUUUCACGAGGGAAAACCUCuu || :||| |||| ||||| GACGGTG-TCCC---TGGAGca NCF4; SH3PXD4 hsa-miR-524* 83 111 CUCUUUCAC----GAAGG---GAAACauc |||:| | | ||||| ||||| GAGGATGGGCAGACTTCCTGTCTTTGagg NCF4; SH3PXD4 hsa-miR-526c 32 58 UUGUC--UUUCGCGAAG-GGAGA-UCUC | ||| ||| | |||| |||| |||| ACCAGCAAAAAC-CTTCAGCTCTCAGAG NCF4; SH3PXD4 hsa-miR-542-5p 1 17 gagcACUGUACUACUAGGGGCu |||| |:| :||||:| --gcTGAC--GGT-GTCCCTGg NCF4; SH3PXD4 hsa-miR-583 84 108 cauUACCC--UGGAAGG--AGAAAC ||||| : ||||| |||||| aggATGGGCAGACTTCCTGTCTTTG NCF4; SH3PXD4 hsa-miR-593 1 22 CGACUCGUUACGGACCGACCACGga ||||| |::||:| |||| || GCTGA-CGGTGTC--CCTGGAGCag NCF4; SH3PXD4 hsa-miR-596 78 98 GGGCUCCUCGGCCCGUCCGAA ||:|:| :| :|||||| ||| CCTGGGAGGATGGGCAGACTT NCF4; SH3PXD4 hsa-miR-597 11 34 ugucACC-AGUAGCU-CACUGUGu ||| || :|| | ||||| tcccTGGAGCAGTGAGGGGACACc NCF4; SH3PXD4 hsa-miR-602 103 127 cccggCGUCGACAGC--GGGCACag | :||| :| |||||| tctttGAGGCTAATGGACCCGTGgg NCF4; SH3PXD4 hsa-miR-609 16 36 uCUC--UACUCUCUUUGUGGga ||| :|||| |::||||| gGAGCAGTGAG-GGGACACCag NCF4; SH3PXD4 hsa-miR-610 31 53 agGGUCG--UGUGUAAAUCGAGu ||||| | || || ||||| caCCAGCAAAAACCTTCAGCTCt NCF4; SH3PXD4 hsa-miR-615 107 134 uCUCC----CUCUGGG---UCCGAGCcu |||| :||||| :||||:| tGAGGCTAATGGACCCGTGGGGCTTGta NCF4; SH3PXD4 hsa-miR-629 68 88 cgacCCGAAUGCAACCCUCUUg || || ||||||:| accaGGAAAAC-CTGGGAGGAt NCF4; SH3PXD4 hsa-miR-631 53 76 cGACUC--CAGACCC-GGUCCaga | ||| | :|||| ||||| tCAGAGGAGATTGGGACCAGGaaa NCF4; SH3PXD4 hsa-miR-632 11 33 AGGG----UGUCCUUCGUCUGUG |||| :||| :|| :||||| TCCCTGGAGCAGTGAGGGGACAC NCF4; SH3PXD4 hsa-miR-639 5 26 UGUCGCGAGCGUUGGCGUCGCUa ||:|:| || | : ||||:|| ACGGTG-TCCCTGGAGCAGTGAg NCF4; SH3PXD4 hsa-miR-641 89 107 CUCCACUGAGAUAGGAUACAGAAA |:| |||| ||| ||||||| GGGCAGACT---TCC--TGTCTTT NCF4; SH3PXD4 hsa-miR-657 55 83 ggauCUCU--CCC----ACUCUUGGACgg |||| ||| || |||||| agagGAGATTGGGACCAGGAAAACCTGgg NCF4; SH3PXD4 hsa-miR-661 103 130 ugcgcgUCCGG-UCUCUGGG---UCCGu ||||: | :||||| :||| tctttgAGGCTAATGGACCCGTGGGGCt NCF4; SH3PXD4 hsa-miR-662 112 128 GACGACCCGGUGUUGCACCCu || ||| || |||||| CTAATGGACC----CGTGGGg NCF4; SH3PXD4 hsa-miR-671 77 101 UGGA-GGUCGGGGAGGUCCCGAAGGA |||| || : || | |||||| ACCTGGGAGGATGGGCA-GACTTCCT NCF4; SH3PXD4 hsa-miR-767-3p 72 95 uCUUUGGUACCC-CAUACUCGUCU |||| | |||| | |||:||||| gGAAAACCTGGGAGGATGGGCAGA NCF4; SH3PXD4 hsa-miR-767-5p 108 130 gUACGAGU--CUGUUGGUACCACGu | ||| | ||| ||:||| || gAGGCTAATGGAC--CCGTGGGGCt NCF4; SH3PXD4 hsa-miR-801 4 24 CAGCUAAGGCGUGCGUCUCGUUAg | ||:| |: | ::|||||:| GACGGT---GTCCCTGGAGCAGTg

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region NCF4 High_conserved miR-135ab/135a-5p chr22:37271971 7-mer-m8 7 CDS NCF4 High_conserved miR-138/138ab chr22:37260166 7-mer-m8 49 CDS NCF4 High_conserved miR-138/138ab chr22:37273903 8-mer 11 3pUTR NCF4 High_conserved miR-145 chr22:37268390 7-mer-A1 20 CDS NCF4 High_conserved miR-145 chr22:37268404 7-mer-m8 47 CDS NCF4 High_conserved miR-150/5127 chr22:37268291 7-mer-A1 11 CDS NCF4 High_conserved let-7/98/4458/4500 chr22:37261006 7-mer-A1 60 CDS, 5pUTR NCF4 High_conserved miR-199ab-5p chr22:37268389 7-mer-A1 16 CDS NCF4 High_conserved miR-1ab/206/613 chr22:37274046 7-mer-A1 11 3pUTR NCF4 High_conserved miR-203 chr22:37268415 7-mer-A1 38 CDS NCF4 High_conserved miR-214/761/3619-5p chr22:37272126 7-mer-m8 38 3pUTR, CDS NCF4 High_conserved miR-22/22-3p chr22:37257089 7-mer-m8 24 5pUTR NCF4 High_conserved miR-22/22-3p chr22:37267740 7-mer-m8 29 CDS NCF4 High_conserved miR-122/122a/1352 chr22:37261112 7-mer-m8 11 CDS, 5pUTR NCF4 High_conserved miR-122/122a/1352 chr22:37271923 7-mer-A1 13 CDS NCF4 High_conserved miR-24/24ab/24-3p chr22:37257074 7-mer-m8 9 5pUTR NCF4 High_conserved miR-24/24ab/24-3p chr22:37271951 7-mer-A1 11 CDS NCF4 High_conserved miR-338/338-3p chr22:37272127 7-mer-A1 40 3pUTR, CDS NCF4 High_conserved miR-34ac/34bc-5p/449abc/449c-5p chr22:37271886 7-mer-m8 0 CDS NCF4 High_conserved miR-125a-5p/125b-5p/351/670/4319 chr22:37268188 7-mer-A1 33 CDS NCF4 High_conserved miR-10abc/10a-5p chr22:37273847 7-mer-m8 20 3pUTR, CDS NCF4 High_conserved miR-129-5p/129ab-5p chr22:37273908 7-mer-m8 2 3pUTR NCF4 Medium_conserved miR-504/4725-5p chr22:37273848 7-mer-m8 20 3pUTR, CDS NCF4 Medium_conserved miR-542-3p chr22:37272063 7-mer-m8 9 CDS NCF4 Medium_conserved miR-653 chr22:37268454 7-mer-A1 56 CDS NCF4 Medium_conserved miR-874 chr22:37267717 8-mer 0 CDS NCF4 Medium_conserved miR-185/882/3473/4306/4644 chr22:37257187 7-mer-A1 13 5pUTR NCF4 Medium_conserved miR-185/882/3473/4306/4644 chr22:37271734 7-mer-m8 9 CDS NCF4 Medium_conserved miR-202-3p chr22:37261006 7-mer-A1 60 CDS, 5pUTR NCF4 Medium_conserved miR-224 chr22:37260093 7-mer-m8 22 CDS NCF4 Medium_conserved miR-28-5p/708/1407/1653/3139 chr22:37257092 7-mer-m8 16 5pUTR NCF4 Medium_conserved miR-28-5p/708/1407/1653/3139 chr22:37268214 7-mer-m8 22 CDS NCF4 Medium_conserved miR-326/330/330-5p chr22:37273685 7-mer-A1 13 3pUTR, CDS NCF4 Medium_conserved miR-346 chr22:37273962 7-mer-m8 11 3pUTR NCF4 Medium_conserved miR-377 chr22:37263455 7-mer-A1 36 CDS, 5pUTR NCF4 Medium_conserved miR-411 chr22:37274017 7-mer-A1 2 3pUTR NCF4 Medium_conserved miR-485-5p/1698/1703/1962 chr22:37268266 7-mer-A1 36 CDS NCF4 Medium_conserved miR-485-5p/1698/1703/1962 chr22:37271999 8-mer 31 CDS NCF4 Medium_conserved miR-491-5p chr22:37267711 8-mer 13 CDS NCF4 Medium_conserved miR-491-5p chr22:37272021 7-mer-A1 7 CDS

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score NCF4 RAID00374545 hsa-miR-346 miRNA MIMAT0000773 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID00560448 hsa-miR-4279 miRNA MIMAT0016909 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID00674991 hsa-miR-214-3p miRNA MIMAT0000271 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID00721107 hsa-miR-4520-5p miRNA MIMAT0019235 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID00967886 hsa-miR-383-5p miRNA MIMAT0000738 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID01257589 hsa-miR-138-5p miRNA MIMAT0000430 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID01608675 hsa-miR-1-3p miRNA MIMAT0000416 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID01941545 hsa-miR-411-5p miRNA MIMAT0003329 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID02057340 hsa-miR-335-5p miRNA MIMAT0000765 NCF4 mRNA 4689 Microarray 0.5483 NCF4 RAID02171325 hsa-miR-211-3p miRNA MIMAT0022694 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID02247154 hsa-miR-10b-5p miRNA MIMAT0000254 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID02338490 hsa-miR-613 miRNA MIMAT0003281 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID02844134 hsa-miR-4790-3p miRNA MIMAT0019962 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID03511778 hsa-miR-206 miRNA MIMAT0000462 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID03641718 hsa-miR-504-5p miRNA MIMAT0002875 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID03746166 hsa-miR-361-5p miRNA MIMAT0000703 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID03941938 hsa-miR-10a-5p miRNA MIMAT0000253 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID03960927 hsa-miR-142-3p miRNA MIMAT0000434 NCF4 mRNA 4689 Prediction 0.1828 NCF4 RAID05119790 MYCN mRNA 4613 NCF4 protein 4689 RIP (RNA Immunoprecipitation)//Western Blot//EMSA (electrophoretic mobility shift assay) 0.9526