iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs6479	in-del	-/GGCAGACA			utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560181	GGTGAGGGGCAGATG[-/GGCAGACA]GGCAGGGGCCTAAAA	84557
rs1040746	snp	A/C	0.5	0	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557943	CCTCCCCCCTCCCCC[A/C]AAAAAATGTTGATCT	84557
rs1040747	snp	C/G	0.476918	0.104919	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34558028	CAGGAACTGTCTCTG[C/G]AGGTCTTTCAGTGTT	84557
rs1055713	snp	C/T	0.0222194	0.103034	utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560215	CACCCACCCGAGGCT[C/T]TGCCCACCGCCTGGA	84557
rs1964848	snp	C/T	0.344147	0.231595	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557666	GCGTGGTGGCTCACA[C/T]CTGTAATCCCAGCAC	84557
rs2144956	snp	A/G	0.344147	0.231595	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34558064	CTGGAGCTCTGCTCG[A/G]GCCCGCGAGTTCTCC	84557
rs2424994	snp	C/T	0.362104	0.223456	upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545113	AGTTCACAAGAAATA[C/T]GTTAGCTGTTTTCCC	84557
rs3830913	in-del	-/C	0.406296	0.19512	downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560505	CATTATTAGGGGCCA[-/C]CCCCTCTAGGAGTGC	84557
rs4911429	snp	A/G	0.457969	0.138741	upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545749	AGTGGAGTCAGGAGC[A/G]CAGGCAGCCAGGGGA	84557
rs4911430	snp	C/G	0.342358	0.232314	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557600	TCTTCCTTTTGGGTT[C/G]CATGTCCTTGTTACT	84557
rs6058077	snp	A/G	0.333491	0.235646	intron-variant	MAP1LC3A	GRCh38.p7	20:34553195	TTGCATCTCAAAAAT[A/G]AAAAATAAATAAATG	84557
rs6058078	snp	C/G	0.472618	0.113759	intron-variant	MAP1LC3A	GRCh38.p7	20:34555019	ggccTATTTTTTGTT[C/G]TTGTTGTTTTTTGTT	84557
rs6058079	snp	A/G	0.343924	0.231686	intron-variant	MAP1LC3A	GRCh38.p7	20:34555069	TGTTTTTCTGAGAAA[A/G]GGCCTCTGTCActca	84557
rs6059909	snp	A/C	0.471958	0.115042	intron-variant	MAP1LC3A	GRCh38.p7	20:34551887	CTGAAAGAAAAAAAA[A/C]CAAATACTGACATGA	84557
rs6059910	snp	C/T	0.330249	0.23677	intron-variant	MAP1LC3A	GRCh38.p7	20:34554303	GAATATTTCATGTTT[C/T]ACCACATAGTATAGT	84557
rs6059911	snp	G/T	0.333261	0.235728	intron-variant	MAP1LC3A	GRCh38.p7	20:34554393	ttttttttttttttt[G/T]agacaaactctcgct	84557
rs6059912	snp	A/T	0.21875	0.248039	intron-variant	MAP1LC3A	GRCh38.p7	20:34555147	ccagcgaattttctt[A/T]ttttttttttttttt	84557
rs6059913	snp	A/G	0.470034	0.11868	intron-variant	MAP1LC3A	GRCh38.p7	20:34555484	ggggtctcactatgt[A/G]gcccaggctggtctc	84557
rs6059914	snp	C/T			upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557474	TGTTCTTGTGTCTCA[C/T]GCATCTTGTTTCTGT	84557
rs6059915	snp	C/G	0.281828	0.247966	utr-variant-3-prime, intron-variant	MAP1LC3A	GRCh38.p7	20:34559933	GGCCTGGGAGTCGGG[C/G]GGCCCCGGTCAGGCC	84557
rs6087597	snp	C/T	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34548781	cacaatctcgactca[C/T]taaaacctccgcctc	84557
rs6087598	snp	A/G	0.475789	0.107327	intron-variant	MAP1LC3A	GRCh38.p7	20:34553130	GGTGGCGGAGGTTGC[A/G]GTACGCCAATATTGT	84557
rs6087599	snp	A/C	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34555444	gccactgtgcctggc[A/C]taattttctcatttt	84557
rs6088521	snp	A/C	0.455263	0.142713	upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545380	TCACCATGTTGCTAA[A/C]GCTGGGATCCAACTC	84557
rs6088522	snp	A/C			upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34546209	gagttcgagaccagc[A/C]tgggtaacgtggtga	84557
rs6088523	snp	C/G	0.480618	0.0965156	intron-variant	MAP1LC3A	GRCh38.p7	20:34547746	CATGCAGAACTGTGC[C/G]TCAGTTAAACCTCTT	84557
rs6088524	snp	C/T	0.478354	0.101757	intron-variant	MAP1LC3A	GRCh38.p7	20:34551580	GGGTTCAAGTGATTC[C/T]CCGATTCAGGAGGTA	84557
rs6088525	snp	C/T	0.477175	0.104362	intron-variant	MAP1LC3A	GRCh38.p7	20:34553468	CCCTCCTCCTCCACG[C/T]TGGCCTCAGTTCAGG	84557
rs6119504	snp	A/C	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34559578	CCTGTTCTGGGGTGG[A/C]TGGAAAGGTCAAGGT	84557
rs6120672	snp	A/G			upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545295	gcctcagcctcccaa[A/G]gagctgggattgcag	84557
rs6120673	snp	A/G			upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545310	ggagctgggattgca[A/G]gtgtgcgccaccaca	84557
rs6120674	snp	A/G	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34550172	CTCCACTTTTTCTCA[A/G]GCCCATGGGTCCAAG	84557
rs6120675	snp	C/T	0.474272	0.110462	intron-variant	MAP1LC3A	GRCh38.p7	20:34551066	gcctgggcaatatag[C/T]gaaaccctgtctcta	84557
rs6120676	snp	C/T	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34551350	gccgtatgattccat[C/T]tagaagaatttctag	84557
rs6120677	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34553709	agccaatctcattta[A/G]gctgtctaaggccac	84557
rs6120678	snp	C/T			intron-variant	MAP1LC3A	GRCh38.p7	20:34559285	CCCGCACCCCCAGCC[C/T]TGCCCCGCCCCCGCC	84557
rs6120679	snp	C/T	0	0	synonymous-codon	MAP1LC3A	GRCh38.p7	20:34559743	GGCTGCAGGCGCCGC[C/T]TGCAGCTGAACCCCA	84557
rs6142195	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34553594	GCACTGTGTGTGTGA[A/G]GTTTGTCCAGTTTGA	84557
rs6142196	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34553643	aagtcggcaaactaa[A/G]gccctcagttaagtc	84557
rs6142197	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34553799	tgtctggccctttaa[A/G]ggaaacatttgccga	84557
rs6142198	snp	C/G			upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34556727	tcagccacctgagta[C/G]ttgggatgacaggcg	84557
rs7268455	snp	A/C			intron-variant	MAP1LC3A	GRCh38.p7	20:34554459	gttcactgcaacctc[A/C]gcctcccaggttcaa	84557
rs7273799	snp	A/G	0.0178098	0.0926698	intron-variant	MAP1LC3A	GRCh38.p7	20:34555620	GTATTTATTATCTAA[A/G]TAATACATCTATGTA	84557
rs7274093	snp	A/G	0.184203	0.241186	intron-variant	MAP1LC3A	GRCh38.p7	20:34553782	aagcctaaaatattt[A/G]ctgtctggcccttta	84557
rs8115693	snp	A/T	0.084364	0.187256	utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560183	TTAGGCCCCTGCCTG[A/T]CTGCCCATCTGCCCC	84557
rs8120546	snp	C/T	0.185472	0.241529	downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560360	CCCTGTGCCTCCAGC[C/T]GCTTGCTTGGGAGTG	84557
rs10221989	snp	A/G	0.000399281	0.0141238	intron-variant	MAP1LC3A	GRCh38.p7	20:34552339	AACTGGGTGTAAGAG[A/G]GACCACTACCATTAT	84557
rs11167239	snp	A/G	0.469642	0.119404	intron-variant	MAP1LC3A	GRCh38.p7	20:34552668	gtcactgtcctgaga[A/G]cggactgaaggaggc	84557
rs11544303	snp	A/G			utr-variant-5-prime, intron-variant, missense	MAP1LC3A	GRCh38.p7	20:34558864	CGCCCAGCCGGGCCC[A/G]CGCGATGCCCTCAGA	84557
rs12625478	snp	A/G	0.0166325	0.0896639	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557382	TCTTAAATATCTGAA[A/G]TACACACCTGACTTT	84557
rs34240585	in-del	-/GGA			intron-variant	MAP1LC3A	GRCh38.p7	20:34548498	CCTGGCTCAAGAGGA[-/GGA]CAGATATGCGGGTGA	84557
rs34906497	in-del	-/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34550070	GTGAAGGAGCTCAGG[-/G]CCTATGGTCTGTCCA	84557
rs35387399	in-del	-/T			intron-variant	MAP1LC3A	GRCh38.p7	20:34555667	ATTTTTTTTTTTTTT[-/T]AAAGAAATGGATCTT	84557
rs35637040	in-del	-/T			intron-variant	MAP1LC3A	GRCh38.p7	20:34554656	GATTACAGGCATGAG[-/T]ACACCGCGCCCGGCC	84557
rs41310797	snp	A/G	0.0185938	0.0946107	intron-variant	MAP1LC3A	GRCh38.p7	20:34547001	GTGAGGAGGGCTGGC[A/G]TCCTGCGCACAGTGG	84557
rs45538834	snp	C/T	0.000399281	0.0141238	intron-variant	MAP1LC3A	GRCh38.p7	20:34550244	GCAGTCGAGGGTGCG[C/T]TTGACCGTGGCTGAG	84557
rs56079857	snp	G/T			utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560139	GGGGAGCAGCTCCCA[G/T]CACCCCTGCTGTGTG	84557
rs57870318	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34552696	GGCAAGGCCAGGGCA[A/G]GAAAACCAGCAAGGA	84557
rs58191574	in-del	-/TTTTT			intron-variant	MAP1LC3A	GRCh38.p7	20:34551485	TTTTTTTTTTTTTTT[-/TTTTT]GAGTCTTGCTGTGTT	84557
rs60584844	snp	A/G/T	0.00636936	0.0560724	intron-variant	MAP1LC3A	GRCh38.p7	20:34546986	GCAAGTCCATGGGGC[A/G/T]TGAGGAGGGCTGGCG	84557
rs73103196	snp	A/G	0.02016	0.0983543	intron-variant	MAP1LC3A	GRCh38.p7	20:34550259	CTTGACCGTGGCTGA[A/G]ACCCCCTGAGCAGAA	84557
rs73105013	snp	C/T	0.0803491	0.183626	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557008	TCCTCTTATCCCCAG[C/T]GTCTTCTGCCTGAAG	84557
rs73259129	snp	C/T	0.000399281	0.0141238	intron-variant	MAP1LC3A	GRCh38.p7	20:34548344	ATGAGTGGCTGGAGG[C/T]TGCGAAGGCCGCGGG	84557
rs73259132	snp	C/T	0.0577344	0.159793	intron-variant	MAP1LC3A	GRCh38.p7	20:34551460	ACCTTCCAAGGGGAA[C/T]GCTGTCCTTTTTTTT	84557
rs73259139	snp	A/G	0.0283406	0.115616	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34558653	GGGCGGGCGGGTTGT[A/G]CGTCGGCCCAATGGG	84557
rs73622016	in-del	-/GAG	0.481165	0.0951993	intron-variant	MAP1LC3A	GRCh38.p7	20:34548493	ACGCCCCTGGCTCAA[-/GAG]GAGGACAGATATGCG	84557
rs73622017	in-del	-/CTT	0.0185938	0.0946107	intron-variant	MAP1LC3A	GRCh38.p7	20:34555566	ATTACACTATTACTC[-/CTT]CTTAAATTTCTTTGA	84557
rs73622018	in-del	-/CTT			intron-variant	MAP1LC3A	GRCh38.p7	20:34555569	ACACTATTACTCCTT[-/CTT]AAATTTCTTTGAAAC	84557
rs74666885	snp	C/T	0.0134861	0.0810011	intron-variant	MAP1LC3A	GRCh38.p7	20:34550443	TATCCAAATAATAAT[C/T]ACTGAGCACCCACCA	84557
rs75188134	snp	A/G	0.0498117	0.149749	intron-variant	MAP1LC3A	GRCh38.p7	20:34553172	CCCTACCTAGGTGAC[A/G]AGCGAAATTGCATCT	84557
rs75278975	snp	C/T	0.0134861	0.0810011	upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34557399	ACACACCTGACTTTA[C/T]AAAGCCAGACAATGC	84557
rs75881564	snp	C/T	0.5	0	utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560181	TTTTAGGCCCCTGCC[C/T]GTCTGCCCATCTGCC	84557
rs76124294	snp	G/T	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34556501	ATGTCCTTTTTTTTT[G/T]GGTTGTTTGGTTTAT	84557
rs76315811	snp	A/T	0.0678174	0.1712	intron-variant	MAP1LC3A	GRCh38.p7	20:34556576	GGCAATTTCTCCTTG[A/T]GTTCTTAATATATTT	84557
rs76373763	snp	C/T	0.5	0	utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560162	GCTGTGTGGTTCATC[C/T]TTTTTTTAGGCCCCT	84557
rs77257739	snp	A/G	0.000798403	0.0199641	intron-variant	MAP1LC3A	GRCh38.p7	20:34549827	AGCACTTCTGGTTCA[A/G]CCAGTCTTCAATCTC	84557
rs77273357	snp	A/G	0.000399281	0.0141238	intron-variant	MAP1LC3A	GRCh38.p7	20:34553135	CGGAGGTTGCGGTAC[A/G]CCAATATTGTGCCGT	84557
rs77613461	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34555801	GGATTACAGGTATGA[A/G]CCACCACACCTGGCC	84557
rs77634145	snp	C/T	0.0240643	0.107019	intron-variant	MAP1LC3A	GRCh38.p7	20:34550096	GTCCACACTCGCGGT[C/T]ATCAGTGGCCAAGCA	84557
rs77719925	snp	C/T	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34556492	ACATCCTCTATGTCC[C/T]TTTTTTTTTGGTTGT	84557
rs77996577	snp	G/T			upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34558381	CGGTTCTGGGCGCCG[G/T]GGGAAACAGCCGGAG	84557
rs78010244	snp	A/C			intron-variant	MAP1LC3A	GRCh38.p7	20:34549350	AGTCTGTAAACGGGA[A/C]CTGCCAATCCTTCCT	84557
rs78024358	snp	A/G	0.000399281	0.0141238	intron-variant	MAP1LC3A	GRCh38.p7	20:34552395	AATGAAATGCCCAGA[A/G]AAATTATACAGCATA	84557
rs78112782	snp	A/G			utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560182	TTTAGGCCCCTGCCT[A/G]TCTGCCCATCTGCCC	84557
rs78881972	snp	A/C	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34551092	CTCTACTAAAAATAC[A/C]AAAAAAAAAATTAGC	84557
rs79334523	snp	A/G			intron-variant	MAP1LC3A	GRCh38.p7	20:34548341	CCCATGAGTGGCTGG[A/G]GGCTGCGAAGGCCGC	84557
rs79361023	snp	A/G	0.00279162	0.0372561	intron-variant	MAP1LC3A	GRCh38.p7	20:34549670	CATCCTAATTCAGGG[A/G]GCGGGTTATTCAGAA	84557
rs79472564	snp	C/G	0.0123036	0.0774623	intron-variant	MAP1LC3A	GRCh38.p7	20:34548559	GAGGCCCTGCATGGG[C/G]TGTGGGGTTGGTGTT	84557
rs80276867	snp	A/G	0.000399281	0.0141238	upstream-variant-2KB	MAP1LC3A	GRCh38.p7	20:34545317	GGATTGCAGGTGTGC[A/G]CCACCACACCTGGGT	84557
rs111488424	snp	C/T	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34554753	GGCTCACTACAACCT[C/T]CACCTCCCTGGTTCA	84557
rs111571469	in-del	-/T	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34555654	AGGCTATAAATCTGA[-/T]TTTTTTTTTTTTTAA	84557
rs112218703	in-del	-/G	0	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34553195	TTGCATCTCAAAAAT[-/G]AAAAATAAATAAATG	84557
rs112224412	snp	A/C/T	0.5	0	intron-variant	MAP1LC3A	GRCh38.p7	20:34553632	CTCTGGATCAAAAGT[A/C/T]GGCAAACTAAGGCCC	84557
rs112954375	in-del	-/CTGCCTGT	0.476746	0.10529	utr-variant-3-prime, intron-variant, downstream-variant-500B	MAP1LC3A, PIGU	GRCh38.p7	20:34560176	CTTTTTTTTAGGCCC[-/CTGCCTGT]CTGCCCATCTGCCCC	84557
rs112988331	in-del	-/T	0.488057	0.0763479	intron-variant	MAP1LC3A	GRCh38.p7	20:34548706	TTCCCCTTCGCTGCC[-/T]TTTTTTTTTTTTTTT	84557
rs113282860	snp	A/C			intron-variant	MAP1LC3A	GRCh38.p7	20:34559173	CGGACCTGGGCCGGC[A/C]CGACCCGGCCTCACG	84557
rs113366137	snp	C/T	0.000798403	0.0199641	intron-variant	MAP1LC3A	GRCh38.p7	20:34553567	GGGCCTGGTCACATT[C/T]AATCTTCTGTGGCAC	84557
rs113413617	snp	A/G	0.5	0	utr-variant-3-prime, intron-variant	MAP1LC3A	GRCh38.p7	20:34559911	TGAGCCAGCAGTAGG[A/G]GGGCTCGGCCTGGGA	84557
rs113529229	snp	A/C			upstream-variant-2KB, intron-variant	MAP1LC3A	GRCh38.p7	20:34558618	GACCCAGGCTCTCTG[A/C]GCCGTGACGTCACGG	84557
rs113750745	snp	C/T	0.00517822	0.0506191	intron-variant	MAP1LC3A	GRCh38.p7	20:34550737	CTCCTCAAACACACA[C/T]CTGCCCCCAAAGCCA	84557

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