DNA & RNA Element - UTRdb Gene Name Type ASPicDB UTRaspic Refseq ID Genome TBCB 3'UTR 3216bdc53c BA107382 NM_001281 chr19:41308525-41308689:+ TBCB 3'UTR ff6833142e BA107383 NM_001281 chr19:41308525-41308690:+ TBCB 3'UTR 3487d3a4a7 NM_001281 chr19:41308525-41308690:+ TBCB 3'UTR 9f17db3d12 NM_001281 chr19:41308525-41308690:+ TBCB 3'UTR db09d78844 NM_001281 chr19:41304559-41304627:+ TBCB 3'UTR 5eaa6c221c NM_001281 chr19:41308239-41308690:+ TBCB 3'UTR 3ebf76b358 NM_001281 chr19:41308525-41308690:+ TBCB 3'UTR 6e811b316d NM_001281 chr19:41304559-41304627:+ TBCB 3'UTR 8c65a875e5 NM_001281 chr19:41298215-41298293:+ TBCB 3'UTR 63f43da5c0 NM_001281 chr19:41299059-41299477:+ TBCB 5'UTR 3216bdc53c CA169290 NM_001281 chr19:41297728-41298302:+ TBCB 5'UTR ff6833142e CA169291 NM_001281 chr19:41298547-41298821:+

DNA & RNA Element - circBase circRNA ID Chrom Start End Strand hsa_circ_0050732 chr19 36616352 36616849 + hsa_circ_0050728 chr19 36606942 36612620 + hsa_circ_0050733 chr19 36616569 36616849 + hsa_circ_0050727 chr19 36605887 36616849 + hsa_circ_0050726 chr19 36605887 36612620 + hsa_circ_0050729 chr19 36606942 36616849 + hsa_circ_0050730 chr19 36611611 36616849 + hsa_circ_0050731 chr19 36612428 36612620 +

DNA & RNA Element - CircNet Circ ID GITPosition Express Symbol Entrez Category Strand Refered Name hsa-circ-TBCB-overlap.1 NM_001281Tchr19:36612496-36612620 expressed TBCB 1155 protein-coding + not_available hsa-circ-TBCB.1 NM_001281Tchr19:36616352-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050732 hsa-circ-TBCB.11 NM_001281Tchr19:36605887-36612620 expressed TBCB 1155 protein-coding + hsa_circ_0050726 hsa-circ-TBCB.13 NM_001281Tchr19:36606942-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050729 hsa-circ-TBCB.14 NM_001300971Tchr19:36616569-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050733 hsa-circ-TBCB.15 NM_001300971Tchr19:36611611-36612620 expressed TBCB 1155 protein-coding x chr19:36611611-36612620_HepG2_poly(A)- hsa-circ-TBCB.2 NM_001281Tchr19:36616569-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050733 hsa-circ-TBCB.3 NM_001281Tchr19:36605887-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050727 hsa-circ-TBCB.4 NM_001281Tchr19:36611611-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050730 hsa-circ-TBCB.5 NM_001300971Tchr19:36612428-36612620 none TBCB 1155 protein-coding + hsa_circ_0050731 hsa-circ-TBCB.6 NM_001300971Tchr19:36616352-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050732 hsa-circ-TBCB.7 NM_001300971Tchr19:36611611-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050730 hsa-circ-TBCB.8 NM_001300971Tchr19:36606942-36616849 expressed TBCB 1155 protein-coding + hsa_circ_0050729 hsa-circ-TBCB.9 NM_001300971Tchr19:36606942-36612620 expressed TBCB 1155 protein-coding + hsa_circ_0050728

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT005195 hsa-miR-30a-5p Homo sapiens TBCB 1155 Homo sapiens pSILAC//Proteomics;Other Functional MTI (Weak) 18668040 MIRT040285 hsa-miR-615-3p Homo sapiens TBCB 1155 Homo sapiens CLASH Functional MTI (Weak) 23622248 MIRT043042 hsa-miR-324-5p Homo sapiens TBCB 1155 Homo sapiens CLASH Functional MTI (Weak) 23622248

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000088 hsa-miR-30a* 1155 TBCB cgACGU-UUGUAGGCUGA-CUUUc |||| | ||:| ||| |||| caUGCAUUAAAUUC-ACUAGAAAc 2 21 134 156 [hg19:19:36616818-36616840:+] 0.6650 121 0 -10.97 -0.7112 MIMAT0004515 hsa-miR-29b-2* 1155 TBCB gaUUCGGUGGUACACUUUGGuc || :|||:| |||||| uaAAUUCACUA---GAAACCca 3 21 141 159 [hg19:19:36616825-36616843:+] 0.5967 132 0 -11.43 -0.2907 MIMAT0004560 hsa-miR-183* 1155 TBCB aauaccgggaagccaUUAAGUg |||||| gagacucaugcauuaAAUUCAc 2 8 128 149 [hg19:19:36616812-36616833:+] 0.6650 120 6 -8.79 -0.1913 MIMAT0009198 hsa-miR-224* 1155 TBCB acaucagugaucccguGGUAAAa |||||| cccuuuucuccugaccCCAUUUu 2 8 70 92 [hg19:19:36616754-36616776:+] 0.5630 120 6 -8.27 -0.1043 MIMAT0000725 hsa-miR-373* 1155 TBCB ccuuucGCGGGGGU--AAAACUCa :||| ::: ||||||| uuccuuUGCCAUUGAUUUUUGAGa 2 17 108 131 [hg19:19:36616792-36616815:+] 0.6160 143 7 -12.56 -1.2624 MIMAT0004748 hsa-miR-423-5p 1155 TBCB uuucagaGCGAGAGACGGGGAGu | || ||||||||| gcucagcCACUGACUGCCCCUCc 2 17 32 54 [hg19:19:36616716-36616738:+] 0.5591 156 7 -25.08 -0.4494 MIMAT0004762 hsa-miR-486-3p 1155 TBCB uaggacaUGACUCGACGGGGc ||||| ||||||| cucagccACUGA-CUGCCCCu 2 15 33 52 [hg19:19:36616717-36616736:+] 0.5591 156 7 -22.61 -0.2399 MIMAT0004767 hsa-miR-193b* 1155 TBCB aguagagcGGGAGUUUUGGGgc | || :|||||| auuaaauuCACUAGAAACCCag 3 15 139 160 [hg19:19:36616823-36616844:+] 0.5967 130 0 -12.91 -0.1083 MIMAT0005457 hsa-miR-518a-5p 1155 TBCB cuuucccGAAGGGAAACGuc :||:||||||| auucauuUUUUCCUUUGCca 3 14 99 118 [hg19:19:36616783-36616802:+] 0.5670 137 0 -13.31 -0.3141 MIMAT0002868 hsa-miR-522 1155 TBCB ugugagauuucccuuGGUAAAa |||||| ccuuuucuccugaccCCAUUUu 2 8 71 92 [hg19:19:36616755-36616776:+] 0.5630 120 6 -7.74 -0.1043 MIMAT0002862 hsa-miR-527 1155 TBCB cuuucccGAAGGGAAACGuc :||:||||||| auucauuUUUUCCUUUGCca 3 14 99 118 [hg19:19:36616783-36616802:+] 0.5670 137 0 -13.31 -0.3141 MIMAT0004794 hsa-miR-551b* 1155 TBCB ccAGAGUGGGUGCGAACUAAAg |:|| ::::| ||||||| uuUUUCCUUUGCCAUUGAUUUu 2 21 105 126 [hg19:19:36616789-36616810:+] 0.5670 156 7 -11.64 -1.0650 MIMAT0003252 hsa-miR-586 1155 TBCB ccuggauuuuuauguUACGUAu |||||| ugauuuuugagacucAUGCAUu 2 8 120 141 [hg19:19:36616804-36616825:+] 0.6160 120 6 -10.89 -0.1714 MIMAT0004804 hsa-miR-615-5p 1155 TBCB cuaggcucguggcccCUGGGGg |||||| uggcccuuuucuccuGACCCCa 2 8 67 88 [hg19:19:36616751-36616772:+] 0.5630 120 6 -16.77 -0.1734 MIMAT0003284 hsa-miR-616* 1155 TBCB uuCAGUGACUUCCCAAAACUCa | ||:||| ||||||| uuGCCAUUGA---UUUUUGAGa 2 21 113 131 [hg19:19:36616797-36616815:+] 0.6160 148 7 -12.88 -1.2655 MIMAT0003285 hsa-miR-548c-3p 1155 TBCB cguuuucauUAACUCUAAAAAc ||| ||||||| uccuuugccAUU--GAUUUUUg 2 14 109 128 [hg19:19:36616793-36616812:+] 0.6160 142 7 -7.49 -1.0784 MIMAT0003285 hsa-miR-548c-3p 1155 TBCB cguuuucauuaacucUAAAAAc |||||| auuuuaauuuuauucAUUUUUu 2 8 88 109 [hg19:19:36616772-36616793:+] 0.5670 120 6 -1.45 -0.1106 MIMAT0003296 hsa-miR-627 1155 TBCB agGAGAAAAGAAUCUCUGAGUg | :| |:|| |||||||| gcCAUUGAUUUUUGAGACUCAu 2 21 115 136 [hg19:19:36616799-36616820:+] 0.6160 160 7 -19.67 -0.9670 MIMAT0004810 hsa-miR-629 1155 TBCB ucaagaggguugcaUUUGGGu |||||| auuaaauucacuagAAACCCa 2 8 139 159 [hg19:19:36616823-36616843:+] 0.5967 120 6 -13.78 -0.3357 MIMAT0004916 hsa-miR-888 1155 TBCB acuGACUGU--CGAAAAACUCau :|| || | |||||||| ccuUUGCCAUUGAUUUUUGAGac 3 19 110 132 [hg19:19:36616794-36616816:+] 0.6160 137 0 -9.61 -0.1355 MIMAT0004971 hsa-miR-921 1155 TBCB cuuaggaccaagacaggGAGUGAUc :|||||| gagacucaugcauuaaaUUCACUAg 2 9 128 152 [hg19:19:36616812-36616836:+] 0.6650 124 6 -13.47 -0.1590 MIMAT0004974 hsa-miR-924 1155 TBCB cguuCUGUAGUGUUCUGAGa ||: |: ::|||||| cauuGAU-UUUUGAGACUCa 2 17 117 135 [hg19:19:36616801-36616819:+] 0.6160 130 6 -9.53 -0.3452 MIMAT0005906 hsa-miR-1255a 1155 TBCB uuaGAUGAAAGAAAC-GAGUAGGa :|: |||:| | ||||| | ccaUUGAUUUUUGAGACUCAUGCa 2 21 116 139 [hg19:19:36616800-36616823:+] 0.6160 123 0 -9.23 -0.1218 MIMAT0005908 hsa-miR-1257 1155 TBCB ccagucuuggguagUAAGUGa |||||| gacucaugcauuaaAUUCACu 2 8 130 150 [hg19:19:36616814-36616834:+] 0.6650 120 6 -12.37 -0.2320 MIMAT0005944 hsa-miR-1252 1155 TBCB auUUACUUAAGU--UAAAGGAAGa | | ||||| |||||||: uaAUUUUAUUCAUUUUUUCCUUUg 2 21 92 115 [hg19:19:36616776-36616799:+] 0.5670 139 0 -11.25 -0.1123 MIMAT0005945 hsa-miR-1255b 1155 TBCB uuGGUGA-AAGAAAC---GAGUAGGc |||:| |:|||| ||||| | ugCCAUUGAUUUUUGAGACUCAUGCa 2 21 114 139 [hg19:19:36616798-36616823:+] 0.6160 126 0 -15.88 -0.1218 MIMAT0005789 hsa-miR-513c 1155 TBCB uauuuGCUGUGG--AGGAACUCUu :| ||:: |::|||||| uccuuUGCCAUUGAUUUUUGAGAc 2 18 109 132 [hg19:19:36616793-36616816:+] 0.6160 132 6 -10.63 -0.1646 MIMAT0007883 hsa-miR-1909 1155 TBCB gccacucgugggccGGGGACGc ||||||| -caccuaaggaauuCCCCUGCu 2 9 1 21 [hg19:19:36616685-36616705:+] 0.5069 140 7 -19.70 -0.5491 MIMAT0014991 hsa-miR-3128 1155 TBCB uacucucAAAAAAUG-AACGGUcu |||||| | |||||| uuauucaUUUUUUCCUUUGCCAuu 3 17 97 120 [hg19:19:36616781-36616804:+] 0.5670 143 0 -9.34 -0.1200 MIMAT0014992 hsa-miR-3129 1155 TBCB uuuGGUUAGAGAU-GUGA-UGACg || | ||| : |||| |||| gcuCCUAGCUCAGCCACUGACUGc 2 20 25 48 [hg19:19:36616709-36616732:+] 0.5591 122 0 -18.42 -0.1822 MIMAT0015007 hsa-miR-3139 1155 TBCB uugUCCGUA----GAC-AACUCGAGGAu ||| || ||| || ||||||| cuaAGGAAUUCCCCUGCUUCAGCUCCUa 2 21 4 31 [hg19:19:36616688-36616715:+] 0.5069 154 7 -19.36 -1.1430 MIMAT0015021 hsa-miR-3148 1155 TBCB uucguguGUGGUCAAAAAAGGu :|:: |||||||| uuaauuuUAUUCAUUUUUUCCu 2 16 91 112 [hg19:19:36616775-36616796:+] 0.5670 147 7 -8.56 -1.2346 MIMAT0015034 hsa-miR-3160 1155 TBCB acccgaaaGAUCAGAGUCGAGa || | :||||||| gaauucccCU-GCUUCAGCUCc 2 15 9 29 [hg19:19:36616693-36616713:+] 0.5069 144 7 -13.62 -0.2335 MIMAT0015037 hsa-miR-3163 1155 TBCB caGAAUGACG--GGAGUAAAAUAu || || | ::| ||||||| ucCUGACCCCAUUUUAAUUUUAUu 2 21 78 101 [hg19:19:36616762-36616785:+] 0.5630 147 7 -13.48 -1.2108 MIMAT0015045 hsa-miR-3170 1155 TBCB ugacaGACAGAGUCUUGGGGUc :| |||| :|||||| ggcccUUUUCUCCUGACCCCAu 2 18 68 89 [hg19:19:36616752-36616773:+] 0.5630 141 6 -16.66 -0.1519 MIMAT0015047 hsa-miR-3172 1155 TBCB auuccUGACGUUUUGGGgu ||| :|||||| aauucACU-AGAAACCCag 3 15 143 160 [hg19:19:36616827-36616844:+] 0.5967 124 0 -10.15 -0.1083 MIMAT0015064 hsa-miR-3184 1155 TBCB uuuUCGAGCC--AGACU-CCGGGGAGu ||||| | |||| ||||||| ccuAGCUCAGCCACUGACUGCCCCUCc 2 22 28 54 [hg19:19:36616712-36616738:+] 0.5591 159 7 -26.24 -0.4494 MIMAT0015087 hsa-miR-514b-5p 1155 TBCB uacuAACGG--AGGGAGAACUCUu ||||| | :|:|||||| uccuUUGCCAUUGAUUUUUGAGAc 2 19 109 132 [hg19:19:36616793-36616816:+] 0.6160 141 6 -15.21 -0.1630 MIMAT0016852 hsa-miR-4298 1155 TBCB gaCGGAGGAGGA-GGACA-GGGUc ||| |||||| : ||| |||| cuGCC-CCUCCUGUGUGUGCCCAu 2 21 45 67 [hg19:19:36616729-36616751:+] 0.5591 129 0 -30.20 -0.2523 MIMAT0016868 hsa-miR-4314 1155 TBCB gacaggguaaaGGGUCUc |||||| uucacuagaaaCCCAGAa 2 8 145 162 [hg19:19:36616829-36616846:+] 0.5967 120 6 -11.75 -0.1603 MIMAT0016912 hsa-miR-4282 1155 TBCB aggaccuacguUUAAAAu |||||| gaccccauuuuAAUUUUa 2 8 82 99 [hg19:19:36616766-36616783:+] 0.5630 120 6 -4.48 -0.2751 MIMAT0000085 hsa-miR-28-5p 1155 TBCB gaguuaucuGAC--ACUCGAGGAa ||| | ||||||| ggaauucccCUGCUUCAGCUCCUa 2 14 8 31 [hg19:19:36616692-36616715:+] 0.5069 144 7 -12.94 -1.1471 MIMAT0000259 hsa-miR-182 1155 TBCB ucacACUCAAGAUGGUAACGGUuu | | ||:| || |||||| uuauUCAUUUUUUCCUUUGCCAuu 3 21 97 120 [hg19:19:36616781-36616804:+] 0.5670 144 0 -10.84 -0.1237 MIMAT0000261 hsa-miR-183 1155 TBCB ucACUUAAGAUGGUCACGGUAu | | ||:| || |||||| auUCAUUUUUUCCUUUGCCAUu 2 21 99 120 [hg19:19:36616783-36616804:+] 0.5670 132 6 -13.03 -0.1491 MIMAT0000439 hsa-miR-153 1155 TBCB cuAGUGAAAACACUGA-UACGUu | |:||||| |||| ||||| auUGAUUUUUGAGACUCAUGCAu 2 21 118 140 [hg19:19:36616802-36616824:+] 0.6160 144 0 -16.51 -1.0987 MIMAT0000646 hsa-miR-155 1155 TBCB uggggauagugcuaauCGUAAUu |||||| gauuuuugagacucauGCAUUAa 2 8 121 143 [hg19:19:36616805-36616827:+] 0.6160 120 6 -10.51 -0.1806 MIMAT0004687 hsa-miR-371-5p 1155 TBCB ucACGGGGGUGUCAAACUCa |||| ::: |||||| uuUGCCAUUGAUUUUUGAGa 2 19 112 131 [hg19:19:36616796-36616815:+] 0.6160 122 6 -11.33 -0.1931 MIMAT0004693 hsa-miR-330-5p 1155 TBCB cggaUUCUGUG-UC--CGGGUCUcu || ||| || |||||| auuaAAUUCACUAGAAACCCAGAaa 3 19 139 163 [hg19:19:36616823-36616847:+] 0.5967 124 0 -14.51 -0.1122 MIMAT0000756 hsa-miR-326 1155 TBCB gaccuccuucccGGGUCUcc |||||| auucacuagaaaCCCAGAaa 3 9 144 163 [hg19:19:36616828-36616847:+] 0.5967 120 0 -10.31 -0.1089 MIMAT0004926 hsa-miR-708 1155 TBCB gggucgaucuaacAUUCGAGGAa | ||||||| gaauuccccugcuUCAGCUCCUa 2 11 9 31 [hg19:19:36616693-36616715:+] 0.5069 142 7 -18.29 -1.1451

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G003019 TBCB Homo sapiens 1155

DNA & RNA Element - TargetScan Gene Name UTR Region Start UTR Region End AIR Total Normalized 3P-seq-tags & Pseudocounts Strand hg19_chromosome Genome Start Genome End TBCB; CG22; CKAP1 1 120 100 1224.043 + chr19 36616684 36616804 TBCB; CG22; CKAP1 121 157 99.878 1224.043 + chr19 36616804 36616841 TBCB; CG22; CKAP1 158 163 0.409 1224.043 + chr19 36616841 36616847 TBCB; CG22; CKAP1 164 166 0.01 1224.043 + chr19 36616847 36616850

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile TBCB hsa-miR-708 beg:12 end:31 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| ||| ||||||| &5' CCCTGCTTC------AGCTCCT- 3' TBCB hsa-miR-28-5p beg:14 end:31 pic:3' GAGTTATCTGACAC--TCGAGGAA 5'& ||| ||||||| &5' ---------CTGCTTCAGCTCCT- 3' TBCB hsa-miR-3139 beg:14 end:32 pic:3' TTGTCCGTAGAC-AACTCGAGGAT 5'& ||| || |||||||| &5' ---------CTGCTTCAGCTCCTA 3' TBCB ebv-miR-BART15 beg:28 end:46 pic:3' AGTTCCTTTGTTTTGGTGACTG 5'& |.| |.|||||||| &5' -------AGCTCAGCCACTGAC 3' TBCB hsa-miR-423-5p beg:36 end:54 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& | || ||||||||| &5' -------CACTGACTGCCCCTC- 3' TBCB hsa-miR-1225-5p beg:45 end:68 pic:3' GGGGGGTGACCCGGCATGGGTG 5'& ||||.| ||| | .||.||||. &5' CCCCTC-CTGTG-TGTGCCCAT 3' TBCB hsa-miR-185 beg:66 end:81 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| ||.||||| &5' ---------GCCCTTTTCTCC- 3' TBCB hsa-miR-1972 beg:33 end:57 pic:3' ACTCGGTGAC--ACGGACCGGACT 5'& |||||||| |||| |||| &5' --AGCCACTGACTGCCCCTCCTG- 3' TBCB hsa-miR-202 beg:60 end:80 pic:3' AAGGGTA-CGGGATATGGAGA 5'& ||||| ||||| .||| &5' --CCCATGGCCCTTT-TCTC- 3' TBCB hsa-miR-203 beg:75 end:94 pic:3' GATCACCAGGATTT--GTAAAGTG 5'& ||||.| |||||.| &5' -------TCCTGACCCCATTTTA- 3' TBCB hsa-miR-219-1-3p beg:5 end:29 pic:3' GCCCTGCAGGTC-TG-AGTTGAGA 5'& ||| ||| .| |||.||| &5' --GGAATTCCCCTGCTTCAGCTC- 3' TBCB hsa-miR-3172 beg:74 end:89 pic:3' ATTCCTGACGTTTTGGGGT 5'& || | .|||||| &5' ------CT-CCTGACCCCA 3' TBCB hsa-miR-3180-3p beg:34 end:52 pic:3' CCGGAGGCCTTCGAGGCGGGGT 5'& ||| |.| |.||||| &5' -GCCACTGA-----CTGCCCC- 3' TBCB hsa-miR-3184 beg:33 end:54 pic:3' TTTTCGAGCCAGACTC-CGGGGAGT 5'& ||| | |||| ||||||| &5' ---AGC-CA--CTGACTGCCCCTC- 3' TBCB hsa-miR-3196 beg:34 end:52 pic:3' CTCCGGGGAC-GGCGGGGC 5'& ||| ||| |.||||| &5' ---GCCACTGACTGCCCC- 3' TBCB hsa-miR-320e beg:13 end:34 pic:3' GGAA-GAGTTG-GG-TCGAAA 5'& ||| .|||.| || |||| &5' CCTGCTTCAGCTCCTAGCT-- 3' TBCB hsa-miR-32star beg:129 end:147 pic:3' TTTATAGTGTGTGTGATTTAAC 5'& | ||..||.|||||| &5' ------CTCATGCATTAAATT- 3' TBCB hsa-miR-373star beg:112 end:131 pic:3' CCTTTCGCGGGGGT--AAAACTCA 5'& ||| ||||||| &5' -------GCCATTGATTTTTGAG- 3' TBCB hsa-miR-380star beg:22 end:41 pic:3' CGCGTACAAGATACCAGTTGGT 5'& || ||| |||.||| &5' --GCTC---CTAGC-TCAGCCA 3' TBCB hsa-miR-4251 beg:64 end:80 pic:3' AACCGGGAAAAGAGTCC 5'& ||||||||||||| &5' -TGGCCCTTTTCTC--- 3' TBCB hsa-miR-425star beg:62 end:84 pic:3' CCCGCCTGTGCTGTA-----AGGGCTA 5'& ||.|.| |||.|| &5' -------CATGGCCCTTTTCTCCTGA- 3' TBCB hsa-miR-4270 beg:66 end:88 pic:3' CGGG---AGGGGACTGAGGGACT 5'& |||| ||.|||||| ||| &5' GCCCTTTTCTCCTGAC-CCC--- 3' TBCB hsa-miR-4278 beg:44 end:57 pic:3' GTTCCCGTTTGGGGGATC 5'& || ||.|||. &5' -----GCC--CCTCCTG- 3' TBCB hsa-miR-4294 beg:46 end:66 pic:3' GGGACGACATCTGAGGG 5'& |||| ||||. . ||| &5' CCCTCCTGTGTGTGCCC 3' TBCB hsa-miR-4300 beg:18 end:32 pic:3' CTTCATCAGGTCGAGGGT 5'& |.|||||||.| &5' -------TTCAGCTCCTA 3' TBCB hsa-miR-4302 beg:74 end:91 pic:3' GAGCGACTCGGTGTGACC 5'& ||| |||| || ||.| &5' CTC-CTGACCC-CATT-- 3' TBCB hsa-miR-4303 beg:14 end:29 pic:3' GACAGGAGTCGAGTCTT 5'& ||| |.||||||| &5' CTG-CTTCAGCTC---- 3' TBCB hsa-miR-4306 beg:66 end:81 pic:3' ATGACGGAAAGAGAGGT 5'& ||| ||.||||| &5' ----GCCCTTTTCTCC- 3' TBCB hsa-miR-4311 beg:16 end:31 pic:3' GTGTGAGTCGAGAGAAAG 5'& .| .||||||| || &5' -GC-TTCAGCTC-CT--- 3' TBCB hsa-miR-455-3p beg:52 end:71 pic:3' CACATATACGGGTACCTGACG 5'& |||.|.||||||||| | &5' -TGTGTGTGCCCATGG-C--- 3' TBCB hsa-miR-513c beg:112 end:132 pic:3' TATTTGCTGTGG--AGGAACTCTT 5'& | ||. |..|||||| &5' ------GCCATTGATTTTTGAGA- 3' TBCB hsa-miR-514b-5p beg:111 end:132 pic:3' TACTAACGG-AGG-GAGAACTCTT 5'& ||||| |. .|.|||||| &5' ----TTGCCATTGATTTTTGAGA- 3' TBCB hsa-miR-616star beg:114 end:131 pic:3' TTCAGTGACTTCCCAAAACTCA 5'& ||.||| ||||||| &5' ----CATTGAT---TTTTGAG- 3' TBCB hsa-miR-627 beg:113 end:137 pic:3' AGG-AGAAAAGAATCTCTGAGTG 5'& || |. ||.|| ||||||||. &5' -CCATTGATTTTT-GAGACTCAT 3' TBCB hsa-miR-629 beg:142 end:160 pic:3' TCAAGAG-GGTTGCATTTGGGT 5'& .|| |.|. ||||||| &5' ----TTCACTAG---AAACCCA 3' TBCB hsa-miR-664star beg:93 end:119 pic:3' TAGGTTAGTA--AAAGGGATCGGTCA 5'& |..| |||| |||||.| |||| &5' -TTTATTCATTTTTTCCTTTGCCA-- 3' TBCB hsa-miR-7 beg:134 end:160 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|| .||| ||||||| ||| &5' GCATTAAATTCACTAGAAACCCA 3' TBCB hsa-miR-760 beg:142 end:162 pic:3' AGGGGTG-TCT--GGGTCTCGGC 5'& ..||| ||| |||||| &5' --TTCACTAGAAACCCAGA---- 3' TBCB hsa-miR-877 beg:12 end:31 pic:3' GGGACGCGGTAGAGGAGATG 5'& |||||| .|| ||||| &5' CCCTGCTTCAGCTCCT---- 3' TBCB hsa-miR-920 beg:14 end:31 pic:3' ATGACGAAGGTGTCGAGGGG 5'& ||||||| ||||||. &5' --CTGCTTC---AGCTCCT- 3' TBCB hsv1-miR-H7 beg:50 end:77 pic:3' GGAAACCAACGT---CTGGGGAAA 5'& ||| || ||| |.|||.||| &5' CCTGTGTGTGCCCATGGCCCTTTT 3' TBCB hsv2-miR-H23 beg:51 end:72 pic:3' CGAC-CGTTCGAGGTGCCGGA 5'& ||| |.. || |||.|||| &5' -CTGTGTGTGC-CCATGGCC- 3' TBCB kshv-miR-K12-11 beg:123 end:144 pic:3' AGC-CTGTGTCCGATTCGTAATT 5'& |.| ||| || ||||||| &5' TTGAGACTCAT-----GCATTAA 3' TBCB sv40-miR-S1-5p beg:34 end:54 pic:3' TTCCGAGTAAAGTCCGGGGAGT 5'& || || ||||||| &5' ---GC-CACTGACTGCCCCTC- 3'

DNA & RNA Element - SomamiR Gene Name Mutation Mutation ID miR ID Chromosome Location Ref Alt mirsite mirseed Seed Class Sample Name Cancer Type TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-1197 chr19 36125845 C T gtgtGTGTCCatggc UAGGACAC m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-1285-3p chr19 36125845 C T gtgtgTGCCCAtggc UCUGGGCA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-216b-3p chr19 36125845 C T gtGTGTGTccatggc ACACACUU m6a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-3138 chr19 36125845 C T gtgtgTGTCCAtggc UGUGGACA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-3187-5p chr19 36125845 C T gtgtgTGCCCAtggc CCUGGGCA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-329-3p chr19 36125845 C T gtGTGTGTccatggc AACACACC m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-362-3p chr19 36125845 C T gtGTGTGTccatggc AACACACC m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-3941 chr19 36125845 C T gtGTGTGTccatggc UUACACAC m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-4520-2-3p chr19 36125845 C T gtgtgTGTCCAtggc UUUGGACA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-4520-3p chr19 36125845 C T gtgtgTGTCCAtggc UUGGACAG m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-4638-3p chr19 36125845 C T gtgtgTGTCCAtggc CCUGGACA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-4643 chr19 36125845 C T gtgTGTGTCcatggc GACACAUG m6a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-4802-3p chr19 36125845 C T gtgtgtgTCCATGgc UACAUGGA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-490-5p chr19 36125845 C T gtgtgtgTCCATGGc CCAUGGAU m7a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-5189-5p chr19 36125845 C T gtgtgTGCCCAtggc UCUGGGCA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-5582-5p chr19 36125845 C T gtgTGTGCCcatggc UAGGCACA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-603 chr19 36125845 C T gtGTGTGTccatggc CACACACU m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-612 chr19 36125845 C T gtgtgTGCCCAtggc GCUGGGCA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-642a-3p chr19 36125845 C T gtgTGTGTCcatggc AGACACAU m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-642b-3p chr19 36125845 C T gtgTGTGTCcatggc AGACACAU m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-6721-5p chr19 36125845 C T gtgtgTGCCCAtggc UGGGCAGG m6a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-6860 chr19 36125845 C T gtgtgTGCCCAtggc ACUGGGCA m6c RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-6871-5p chr19 36125845 C T gtgtgtgCCCATGgc CAUGGGAG m6a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-6890-5p chr19 36125845 C T gtgtgtgCCCATGgc CAUGGGGU m6a RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36125845C>T COSN6143449 hsa-miR-8064 chr19 36125845 C T gtGTGTGCccatggc AGCACACU m6b RK119_C01 [liver][NS][carcinoma][NS] TBCB chr19:g.36115626C>G COSM3989962 hsa-let-7i-3p chr19 36115626 C G acaccTTGCGCtccg CUGCGCAA m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-3202 chr19 36115626 C G acaCCTTCCgctccg UGGAAGGG m6b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-339-3p chr19 36115626 C G acaccttGCGCTCcg UGAGCGCC m6b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-4476 chr19 36115626 C G acaCCTTCCgctccg CAGGAAGG m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-4533 chr19 36115626 C G acaCCTTCCgctccg UGGAAGGA m6b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-4708-3p chr19 36115626 C G acaCCTTGCgctccg AGCAAGGC m6b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-4747-5p chr19 36115626 C G acaCCTTCCgctccg AGGGAAGG m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-4761-5p chr19 36115626 C G aCACCTTGcgctccg ACAAGGUG m7b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-5196-5p chr19 36115626 C G acaCCTTCCgctccg AGGGAAGG m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-6125 chr19 36115626 C G acaCCTTCCGCtccg GCGGAAGG m8a TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-624-3p chr19 36115626 C G acACCTTGcgctccg CACAAGGU m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-6809-5p chr19 36115626 C G acaCCTTGCgctccg UGGCAAGG m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-6850-5p chr19 36115626 C G acaccTTCCGCtccg GUGCGGAA m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-6876-5p chr19 36115626 C G acaCCTTCCgctccg CAGGAAGG m6c TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115626C>G COSM3989962 hsa-miR-7846-3p chr19 36115626 C G acacctTCCGCTccg CAGCGGAG m6b TCGA-A4-7734-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-103a-2-5p chr19 36115637 A T tccgAGAAGCgatac AGCUUCUU m6b TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-3182 chr19 36115637 A T tccgAGAAGCgatac GCUUCUGU m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-324-5p chr19 36115637 A T tccgaGATGCGatac CGCAUCCC m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-3675-3p chr19 36115637 A T tccGAGATGcgatac CAUCUCUA m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-4790-5p chr19 36115637 A T tccgagAAGCGATac AUCGCUUU m7a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-516a-5p chr19 36115637 A T tcCGAGAAgcgatac UUCUCGAG m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-639 chr19 36115637 A T tccgagaAGCGATac AUCGCUGC m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-6809-3p chr19 36115637 A T tccGAGAAGcgatac CUUCUCUU m6a TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-6814-3p chr19 36115637 A T tccgagATGCGAtac ACUCGCAU m6c TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-6815-3p chr19 36115637 A T tccgAGAAGCgatac UGGCUUCU m6c TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-6872-5p chr19 36115637 A T tccgagATGCGAtac UCUCGCAU m6c TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36115637A>T COSM3989963 hsa-miR-942-5p chr19 36115637 A T tccGAGAAGcgatac UCUUCUCU m6b TCGA-A4-A5Y1-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-1234-3p chr19 36125700 C A tgcCAGGCCaagtat UCGGCCUG m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-1271-5p chr19 36125700 C A tgccagGCCAAGtat CUUGGCAC m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-1343-3p chr19 36125700 C A tgCCAGGAcaagtat CUCCUGGG m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-212-5p chr19 36125700 C A tgccagGCCAAGtat ACCUUGGC m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-2355-3p chr19 36125700 C A tgccAGGACAAgtat AUUGUCCU m7b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-2861 chr19 36125700 C A tgcCAGGCCaagtat GGGGCCUG m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3116 chr19 36125700 C A tgCCAGGCcaagtat UGCCUGGA m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3176 chr19 36125700 C A tgccAGGCCAagtat ACUGGCCU m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3187-3p chr19 36125700 C A tgccaGGCCAAgtat UUGGCCAU m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3614-5p chr19 36125700 C A tgccaggCCAAGTat CCACUUGG m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3655 chr19 36125700 C A tgccagGACAAGtat GCUUGUCG m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3909 chr19 36125700 C A tgccAGGACAagtat UGUCCUCU m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-3922-3p chr19 36125700 C A tgccAGGCCAagtat UCUGGCCU m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-4254 chr19 36125700 C A tgCCAGGCcaagtat GCCUGGAG m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-4646-3p chr19 36125700 C A tgccaGGACAAgtat AUUGUCCC m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-4701-5p chr19 36125700 C A tgccaGGCCAAgtat UUGGCCAC m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-588 chr19 36125700 C A tgccaGGCCAAgtat UUGGCCAC m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-635 chr19 36125700 C A tgccaggCCAAGTat ACUUGGGC m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-643 chr19 36125700 C A tgccaggACAAGTat ACUUGUAU m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6500-3p chr19 36125700 C A tgccaggACAAGTat ACACUUGU m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-661 chr19 36125700 C A tgCCAGGCcaagtat UGCCUGGG m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6735-3p chr19 36125700 C A tgcCAGGCCaagtat AGGCCUGU m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-676-3p chr19 36125700 C A tgccAGGACAagtat CUGUCCUA m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6774-5p chr19 36125700 C A tgccaggCCAAGTat ACUUGGGC m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6783-3p chr19 36125700 C A tgCCAGGAcaagtat UUCCUGGG m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6838-3p chr19 36125700 C A tgcCAGGACaagtat AAGUCCUG m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6852-3p chr19 36125700 C A tgccAGGACAagtat UGUCCUCU m6a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-6878-3p chr19 36125700 C A tgccAGGCCAagtat CUGGCCUC m6b 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-7107-5p chr19 36125700 C A tgcCAGGCCaagtat UCGGCCUG m6c 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125700C>A COSM4590965 hsa-miR-890 chr19 36125700 C A tgccaggCCAAGTAt UACUUGGA m7a 93VU147T [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-1208 chr19 36125726 G A caagccAACAGTcgt UCACUGUU m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-1267 chr19 36125726 G A caagcCAACAGtcgt CCUGUUGA m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-1287-5p chr19 36125726 G A caagCCAGCAgtcgt UGCUGGAU m6a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-1288-3p chr19 36125726 G A caagccaGCAGTCgt UGGACUGC m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-1306-3p chr19 36125726 G A caaGCCAACagtcgt ACGUUGGC m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-149-5p chr19 36125726 G A caAGCCAGcagtcgt UCUGGCUC m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-3064-5p chr19 36125726 G A caAGCCAGcagtcgt UCUGGCUG m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-367-5p chr19 36125726 G A caagcCAACAGTcgt ACUGUUGC m7a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-3692-5p chr19 36125726 G A caagCCAGCAGtcgt CCUGCUGG m7b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-370-3p chr19 36125726 G A caagcCAGCAGtcgt GCCUGCUG m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4425 chr19 36125726 G A caagCCAACAgtcgt UGUUGGGA m6a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-452-5p chr19 36125726 G A caagccAACAGTcgt AACUGUUU m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4676-3p chr19 36125726 G A caagccAACAGTcgt CACUGUUU m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4715-5p chr19 36125726 G A caaGCCAACagtcgt AAGUUGGC m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4731-5p chr19 36125726 G A caagCCAGCAgtcgt UGCUGGGG m6a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4781-3p chr19 36125726 G A caagCCAACAgtcgt AAUGUUGG m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-4794 chr19 36125726 G A caAGCCAGcagtcgt UCUGGCUA m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-5002-3p chr19 36125726 G A caagccaGCAGTCgt UGACUGCC m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-5580-5p chr19 36125726 G A caAGCCAGCAgtcgt UGCUGGCU m8a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-6071 chr19 36125726 G A caagcCAGCAGtcgt UUCUGCUG m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-6504-5p chr19 36125726 G A caAGCCAGcagtcgt UCUGGCUG m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-664a-5p chr19 36125726 G A caAGCCAGcagtcgt ACUGGCUA m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-6893-3p chr19 36125726 G A caagcCAGCAGtcgt CCCUGCUG m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-744-3p chr19 36125726 G A caagcCAACAGtcgt CUGUUGCC m6a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-892b chr19 36125726 G A caAGCCAGcagtcgt CACUGGCU m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-892c-3p chr19 36125726 G A caagccAACAGTcgt CACUGUUU m6b 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-93-3p chr19 36125726 G A caagcCAGCAGTcgt ACUGCUGA m7a 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS] TBCB chr19:g.36125726G>A COSM4138226 hsa-miR-943 chr19 36125726 G A caagccaACAGTCgt CUGACUGU m6c 8067513 [pancreas][NS][carcinoid-endocrine_tumour][NS]

DNA & RNA Element - miRcode Gene Name Type microRNA Seed Position Seed Type Total Cons% Tr Region TBCB High_conserved miR-99ab/100 chr19:36616671 7-mer-m8 27 CDS, ncRNA TBCB High_conserved miR-139-5p chr19:36607067 7-mer-A1 20 CDS, ncRNA TBCB High_conserved miR-145 chr19:36606954 7-mer-m8 38 CDS, ncRNA TBCB High_conserved miR-145 chr19:36606993 7-mer-m8 38 CDS, ncRNA TBCB High_conserved miR-150/5127 chr19:36607331 7-mer-A1 11 ncRNA TBCB High_conserved miR-150/5127 chr19:36607486 8-mer 22 ncRNA TBCB High_conserved miR-155 chr19:36616827 7-mer-A1 27 3pUTR, ncRNA TBCB High_conserved let-7/98/4458/4500 chr19:36606164 7-mer-m8 7 5pUTR TBCB High_conserved miR-187 chr19:36612434 7-mer-m8 9 CDS TBCB High_conserved miR-192/215 chr19:36607455 7-mer-m8 9 ncRNA TBCB High_conserved miR-193/193b/193a-3p chr19:36606108 7-mer-m8 24 5pUTR TBCB High_conserved miR-203 chr19:36616368 7-mer-A1 60 CDS, ncRNA TBCB High_conserved miR-204/204b/211 chr19:36613041 7-mer-m8 7 ncRNA TBCB High_conserved miR-205/205ab chr19:36613012 7-mer-A1 27 ncRNA TBCB High_conserved miR-219-5p/508/508-3p/4782-3p chr19:36612592 7-mer-m8 2 CDS TBCB High_conserved miR-122/122a/1352 chr19:36607114 7-mer-m8 7 ncRNA TBCB High_conserved miR-23abc/23b-3p chr19:36607446 7-mer-m8 9 ncRNA TBCB High_conserved miR-24/24ab/24-3p chr19:36616405 7-mer-A1 36 CDS, ncRNA TBCB High_conserved miR-30abcdef/30abe-5p/384-5p chr19:36605997 7-mer-A1 18 5pUTR TBCB High_conserved miR-31 chr19:36606153 8-mer 27 5pUTR TBCB Medium_conserved miR-542-3p chr19:36607568 7-mer-m8 7 ncRNA TBCB Medium_conserved miR-615-3p chr19:36605904 7-mer-m8 4 5pUTR TBCB Medium_conserved miR-653 chr19:36607145 7-mer-m8 22 ncRNA TBCB Medium_conserved miR-873 chr19:36612449 7-mer-A1 47 CDS TBCB Medium_conserved miR-876-5p/3167 chr19:36607284 7-mer-m8 13 ncRNA TBCB Medium_conserved miR-136 chr19:36607584 7-mer-m8 4 ncRNA TBCB Medium_conserved miR-149 chr19:36612868 7-mer-A1 4 ncRNA TBCB Medium_conserved miR-185/882/3473/4306/4644 chr19:36605912 7-mer-m8 13 5pUTR TBCB Medium_conserved miR-224 chr19:36607393 8-mer 16 ncRNA TBCB Medium_conserved miR-28-5p/708/1407/1653/3139 chr19:36607058 7-mer-A1 47 CDS, ncRNA TBCB Medium_conserved miR-28-5p/708/1407/1653/3139 chr19:36616715 8-mer 22 3pUTR, ncRNA TBCB Medium_conserved miR-290-5p/292-5p/371-5p/293 chr19:36607548 7-mer-A1 11 ncRNA TBCB Medium_conserved miR-290-5p/292-5p/371-5p/293 chr19:36616815 7-mer-A1 29 3pUTR, ncRNA TBCB Medium_conserved miR-326/330/330-5p chr19:36612981 7-mer-m8 11 ncRNA TBCB Medium_conserved miR-335/335-5p chr19:36606151 7-mer-m8 9 5pUTR TBCB Medium_conserved miR-339b/339-5p/3586-5p chr19:36607247 8-mer 9 ncRNA TBCB Medium_conserved miR-342-3p chr19:36606422 7-mer-m8 36 5pUTR, ncRNA TBCB Medium_conserved miR-342-3p chr19:36612974 7-mer-m8 22 ncRNA TBCB Medium_conserved miR-370 chr19:36606363 7-mer-A1 7 5pUTR TBCB Medium_conserved miR-370 chr19:36612498 8-mer 20 CDS TBCB Medium_conserved miR-377 chr19:36612973 7-mer-m8 20 ncRNA TBCB Medium_conserved miR-377 chr19:36616575 7-mer-A1 40 CDS, ncRNA TBCB Medium_conserved miR-431 chr19:36612431 8-mer 29 CDS TBCB Medium_conserved miR-450a/451a chr19:36606055 7-mer-A1 9 5pUTR TBCB Medium_conserved miR-485-5p/1698/1703/1962 chr19:36606559 8-mer 47 CDS, ncRNA TBCB Medium_conserved miR-485-5p/1698/1703/1962 chr19:36607654 7-mer-m8 9 ncRNA TBCB Medium_conserved miR-488 chr19:36607130 7-mer-m8 7 ncRNA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score TBCB RAID00130459 hsa-miR-651-3p miRNA MIMAT0026624 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID00164044 hsa-miR-6895-5p miRNA MIMAT0027690 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID00235887 hsa-miR-4768-3p miRNA MIMAT0019921 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID00243993 hsa-miR-3184-5p miRNA MIMAT0015064 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID00606274 hsa-miR-5197-5p miRNA MIMAT0021130 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID01009359 hsa-miR-183-5p miRNA MIMAT0000261 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID01054441 hsa-miR-423-5p miRNA MIMAT0004748 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID01346384 hsa-miR-155-5p miRNA MIMAT0000646 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID01604744 hsa-miR-324-5p miRNA MIMAT0000761 TBCB mRNA 1155 CLASH 0.5483 TBCB RAID01675146 hsa-miR-330-5p miRNA MIMAT0004693 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID01781000 hsa-miR-182-5p miRNA MIMAT0000259 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID01850802 hsa-miR-3662 miRNA MIMAT0018083 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID02052015 hsa-miR-615-3p miRNA MIMAT0003283 TBCB mRNA 1155 CLASH 0.5483 TBCB RAID02168781 hsa-miR-371a-5p miRNA MIMAT0004687 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID02299126 hsa-miR-371b-5p miRNA MIMAT0019892 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID02412521 hsa-miR-153-3p miRNA MIMAT0000439 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID02534567 hsa-miR-708-5p miRNA MIMAT0004926 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID02635024 hsa-miR-28-5p miRNA MIMAT0000085 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID03106813 hsa-miR-3148 miRNA MIMAT0015021 TBCB mRNA 1155 Prediction 0.1828 TBCB RAID03899805 hsa-miR-30a-5p miRNA MIMAT0000087 TBCB mRNA 1155 Mass spectrometry 0.7311 TBCB RAID04034058 hsa-miR-326 miRNA MIMAT0000756 TBCB mRNA 1155 CLIP-seq//Prediction 0.6308 TBCB RAID04314763 FENDRR lncRNA 400550 TBCB protein 1155 Microarray//RNA-seq 0.6606 TBCB RAID04906240 HULC lncRNA 728655 TBCB protein 1155 Western Blot//RT-PCR 0.8808