iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs472137	snp	A/C			intron-variant	USP42	GRCh38.p7	7:6087621	AGGCGGGGCAGGGAG[A/C]TAATTcctgtaatcc	84132
rs520044	snp	C/T	0.0376037	0.131863	intron-variant	USP42	GRCh38.p7	7:6146450	tcggtctcgaactcc[C/T]gggctcaagtgatcc	84132
rs538319	snp	G/T	0.029116	0.117091	intron-variant	USP42	GRCh38.p7	7:6091604	AAAATTAATATGGGG[G/T]TGAGAATGAGAATCA	84132
rs539130	snp	A/G	0.385168	0.210309	intron-variant	USP42	GRCh38.p7	7:6091538	GGTAGCTGACTAGAC[A/G]CTATGTATGGCActg	84132
rs540930	snp	G/T	0.41441	0.188333	intron-variant	USP42	GRCh38.p7	7:6091342	CTACTTGAGGGAGGC[G/T]GAGGTGGGAGGATCG	84132
rs556718	snp	G/T	0.0715223	0.175059	intron-variant	USP42	GRCh38.p7	7:6148152	cggggtttcaccctg[G/T]tacccagggtggtct	84132
rs566345	snp	C/T	0.0248432	0.108648	intron-variant	USP42	GRCh38.p7	7:6150658	TATAGGATTTATTAA[C/T]TTGCCTTTTAGAAGA	84132
rs591982	snp	G/T	0.47023	0.118317	upstream-variant-2KB	USP42	GRCh38.p7	7:6077521	GGGGATGAAGAATCT[G/T]TTCCAAACTCACTTT	84132
rs616946	snp	G/T	0.0287284	0.116357	intron-variant	USP42	GRCh38.p7	7:6138869	gggactggtttcacg[G/T]aagaccatttttcca	84132
rs627222	snp	C/T	0.308414	0.24308	utr-variant-5-prime	USP42	GRCh38.p7	7:6088824	CACGTCCATCATCTC[C/T]ATGCTTGGAACACTT	84132
rs633827	snp	C/T	0.0448719	0.142907	intron-variant	USP42	GRCh38.p7	7:6111905	AATAAAAGggcctgg[C/T]gtggtggttcatgcc	84132
rs635515	snp	G/T	0.0448719	0.142907	intron-variant	USP42	GRCh38.p7	7:6111530	GTCAATGACGAACAA[G/T]TAACAGGAAAACAAA	84132
rs654632	snp	A/T	0.486464	0.0811471	upstream-variant-2KB, intron-variant	USP42	GRCh38.p7	7:6080691	TTTTTTGAGACAGAG[A/T]CTCACTCTGTCGCCC	84132
rs668326	snp	G/T	0.370162	0.219229	upstream-variant-2KB, intron-variant	USP42	GRCh38.p7	7:6079926	TATGAAGTTTTTTTT[G/T]GGGGGCGTAGGGGGG	84132
rs668334	snp	C/G	0.489318	0.0722982	upstream-variant-2KB, intron-variant	USP42	GRCh38.p7	7:6079920	GTTTTTTTTGGGGGG[C/G]GTAGGGGGGTGAAAT	84132
rs688103	snp	A/G	0.486	0.0824865	intron-variant	USP42	GRCh38.p7	7:6085818	aaaccagcctggcca[A/G]catggtgagatcccg	84132
rs763820	snp	C/G	0.252702	0.249985	intron-variant	USP42	GRCh38.p7	7:6140404	GAAGCAGTGCACACA[C/G]TATGCTCCCAGTTTA	84132
rs852157	snp	A/G			intron-variant	USP42	GRCh38.p7	7:6092053	aagaagaagaagaaa[A/G]aagaagaagaagaag	84132
rs852158	snp	A/G			intron-variant	USP42	GRCh38.p7	7:6092082	GGAAGAAGAAGAAGA[A/G]GAAGAGGAAGAAGAA	84132
rs852159	snp	A/G			intron-variant	USP42	GRCh38.p7	7:6092076	AGAAGAAGAGGAAGA[A/G]GAAGAAGAAGAAGAA	84132
rs852162	snp	A/G	0.39121	0.2063	intron-variant	USP42	GRCh38.p7	7:6090888	AGTTAAGTTATAAGC[A/G]TAAGGTCCTCTCAAG	84132
rs852163	snp	A/G	0.388587	0.208071	intron-variant	USP42	GRCh38.p7	7:6090025	ggcgtgagccactgc[A/G]cctggccctatatat	84132
rs852164	snp	C/T	0.332568	0.235971	intron-variant	USP42	GRCh38.p7	7:6086275	gagcttgcagtgaac[C/T]gagatcgcgccacta	84132
rs852165	snp	A/G	0.479744	0.0985793	intron-variant	USP42	GRCh38.p7	7:6083016	aatcagcttgaaccc[A/G]ggaggcagaggttgc	84132
rs852166	snp	C/G	0.481932	0.0933148	intron-variant	USP42	GRCh38.p7	7:6082735	tggtcccagctacta[C/G]ggaggctcagatagg	84132
rs863778	snp	A/G			intron-variant	USP42	GRCh38.p7	7:6097862	tggctcacgcctgta[A/G]tcccagcactttggg	84132
rs865458	snp	C/T			intron-variant	USP42	GRCh38.p7	7:6086468	cctgtaatctcagca[C/T]tttgggaggccgagg	84132
rs886675	snp	C/T	0.498714	0.0253268	intron-variant	USP42	GRCh38.p7	7:6160004	GAGGTCCTGATCTGC[C/T]GCCCGGCCCTGGGCC	84132
rs886676	snp	C/T	0.252421	0.249988	intron-variant	USP42	GRCh38.p7	7:6159164	CTGAACTGGGCGGAA[C/T]AGAGCCAGAGGAGGA	84132
rs1044028	snp	A/T	0	0	utr-variant-3-prime, intron-variant, downstream-variant-500B	CYTH3, USP42	GRCh38.p7	7:6161934	GATTTCTGGAGTGTC[A/T]GTTATTCAATGATGT	84132
rs1046892	snp	A/G	0	0	synonymous-codon	USP42	GRCh38.p7	7:6155151	GCACAAAAAATCAAA[A/G]AAGAAAAAGAAATCC	84132
rs1046899	snp	A/G	0	0	synonymous-codon	USP42	GRCh38.p7	7:6149672	TTCCAGTGTCAACAG[A/G]GCTAGTCCTGTTAAT	84132
rs1046902	snp	C/T	0	0	missense	USP42	GRCh38.p7	7:6149860	CCAAGCCCGTTCCCT[C/T]TTCTACCATTACCAA	84132
rs1101167	snp	A/G	0.0663309	0.169604	intron-variant	USP42	GRCh38.p7	7:6125056	ataactggaattaca[A/G]gcatgagccaccaca	84132
rs1636031	snp	C/G	0.487558	0.0778863	upstream-variant-2KB, intron-variant	USP42	GRCh38.p7	7:6080084	AGGCGTCCGCCACCA[C/G]GCCTGGCTAATTTTT	84132
rs1859546	snp	A/G	0.00159617	0.0282053	intron-variant	USP42	GRCh38.p7	7:6159920	GTGCCACCTCGGGGC[A/G]CAGACAGCAGCACAG	84132
rs2107853	snp	C/T	0.149665	0.228982	intron-variant	USP42	GRCh38.p7	7:6134407	AATCCCAGCACCCAA[C/T]AACATAAAATTCATT	84132
rs2107854	snp	A/G	0.425894	0.177655	intron-variant	USP42	GRCh38.p7	7:6125964	atattccattacagt[A/G]ttatcactgggggag	84132
rs2301912	snp	C/T	0.000889014	0.0210646	synonymous-codon, utr-variant-5-prime	USP42	GRCh38.p7	7:6111286	TGGTCCTAAAGAAAG[C/T]GTGTGATTTGACACA	84132
rs2527401	snp	C/G	0.475789	0.107327	upstream-variant-2KB, intron-variant	USP42	GRCh38.p7	7:6081068	TGGTATTAGGTACAA[C/G]ACTCTCTGAGAGCTT	84132
rs2687604	snp	C/T	0.0279526	0.114869	intron-variant	USP42	GRCh38.p7	7:6129738	tggtggtgcacacct[C/T]taatcctagctactt	84132
rs3219585	microsatellite	(CA)19/20/21/22/23/24/25/26/27/28	0.838212	0.0779444	intron-variant	USP42	GRCh38.p7	7:6091678	TAATCATTATGTTAG[lengthTooLong]TATATATGTTGCTGA	84132
rs3750063	snp	A/G	0.170969	0.237179	intron-variant	USP42	GRCh38.p7	7:6144205	TGCTAAGGTATGTGG[A/G]TGATGTCATTAATCA	84132
rs3750064	snp	C/G	0.141291	0.225127	intron-variant	USP42	GRCh38.p7	7:6159441	TCTTTCCTGACCTTT[C/G]CTTTCTAGGTGATTG	84132
rs3764814	snp	A/G	0.276017	0.248643	synonymous-codon	USP42	GRCh38.p7	7:6150149	GGTCATGGGTTCTTG[A/G]AGCTCGTGCGGAGTG	84132
rs3815216	snp	A/C/T	0.00337468	0.0409404	synonymous-codon	USP42	GRCh38.p7	7:6150495	TTACCTCATTTCATC[A/C/T]GTCGAGCCTTTCAGT	84132
rs3857758	snp	C/G	0.232067	0.249356	intron-variant	USP42	GRCh38.p7	7:6097500	aggatcacttgaggc[C/G]aggaattggaggctg	84132
rs4035512	snp	G/T	0.491629	0.0641526	intron-variant	USP42	GRCh38.p7	7:6117709	tcccaatacttggtg[G/T]ggtcagtcttcttca	84132
rs4427077	snp	G/T	0.480382	0.097079	intron-variant	USP42	GRCh38.p7	7:6094823	ctttttttttttttt[G/T]gtcacccaggctgga	84132
rs4478483	snp	A/T	0.5	0	intron-variant	USP42	GRCh38.p7	7:6100009	TTTCACAAGTCtatt[A/T]ttattattattatta	84132
rs4486101	snp	C/G	0.402277	0.198272	intron-variant, downstream-variant-500B	USP42	GRCh38.p7	7:6153238	AGATCACACCACTGC[C/G]CTCCAGCCTGGGCAA	84132
rs4724772	snp	A/C/T	0	0	intron-variant, upstream-variant-2KB	USP42	GRCh38.p7	7:6114678	tatatatatatatat[A/C/T]ttttttttttttttt	84132
rs4990112	snp	C/T	0.491263	0.0655142	intron-variant	USP42	GRCh38.p7	7:6108601	ttctcctacctcagc[C/T]tcccgagtagctggg	84132
rs5882080	in-del	-/T	0	0	intron-variant	USP42	GRCh38.p7	7:6096933	TTTCTTTTTTTTTTT[-/T]GAGACAGTCTTCCTC	84132
rs5882082	in-del	-/T	0.274661	0.248781	intron-variant	USP42	GRCh38.p7	7:6158941	TGCTGTGGTCAGGCG[-/T]TGTCTGTGTGGTGGC	84132
rs6463528	snp	A/C	0.489434	0.0719116	intron-variant	USP42	GRCh38.p7	7:6128029	tcaaaatcctacatc[A/C]tcaaaattttggtct	84132
rs6463529	snp	C/T	0.454905	0.143226	missense	USP42	GRCh38.p7	7:6154643	GGAGCGGGGTGGAGC[C/T]GGACTGGGTCAGACA	84132
rs6463530	snp	G/T	0.482757	0.0912364	intron-variant	USP42	GRCh38.p7	7:6157745	GATTTGCTCGCTTGG[G/T]TCCTTAGAAGCGTGG	84132
rs6944071	snp	A/G	0.137527	0.223271	intron-variant	USP42	GRCh38.p7	7:6145725	CAGTAGCATTCTTGG[A/G]GTAGGGAGAGGTGGA	84132
rs6949823	snp	C/T	0.138207	0.223612	intron-variant	USP42	GRCh38.p7	7:6144534	TGGTCAAAAACTAAA[C/T]AGCATGCAAGAGAAA	84132
rs6953449	snp	C/G	0.0209421	0.100162	intron-variant	USP42	GRCh38.p7	7:6129959	TTCTCAGTATGATGA[C/G]TGATTTTCAGTTGAA	84132
rs6953775	snp	C/G	0.467439	0.123371	intron-variant	USP42	GRCh38.p7	7:6130110	cttgcgtcgacctcc[C/G]aaagtgctagaattg	84132
rs6957141	snp	C/T	0.0592355	0.161582	intron-variant	USP42	GRCh38.p7	7:6133398	ttttgagattttctc[C/T]ctctgtgttttatta	84132
rs6958204	snp	A/G	0.0117071	0.0756076	intron-variant	USP42	GRCh38.p7	7:6157105	ACTATTTCTTAATAC[A/G]TTTTCTTTGCAAAGG	84132
rs6959740	snp	A/G	0.27008	0.249192	downstream-variant-500B	CYTH3, USP42	GRCh38.p7	7:6161674	GCTCCTGCCGAAGTC[A/G]GCACCTTCGGCCAGG	84132
rs6961833	snp	C/T	0.487621	0.0776941	intron-variant	USP42	GRCh38.p7	7:6134035	agctgggactacagg[C/T]gcccaccaccacgcc	84132
rs6964482	snp	G/T	0.467744	0.122832	intron-variant	USP42	GRCh38.p7	7:6094857	cagtgacgcaatctc[G/T]gctcattgcaacctc	84132
rs6964819	snp	A/G	0.247804	0.24999	intron-variant	USP42	GRCh38.p7	7:6155245	GCGCTGCTGTCAGCA[A/G]TGGGGCCTGTCCCTT	84132
rs6965578	snp	C/T	0.20511	0.245937	intron-variant	USP42	GRCh38.p7	7:6124902	ttccacttctcaggc[C/T]ggtgccagtggctca	84132
rs6973832	snp	A/G	0.494315	0.0530107	intron-variant	USP42	GRCh38.p7	7:6139300	GAAGCACACAGAACA[A/G]TGTTCACTTTACCTT	84132
rs6975973	snp	C/G			intron-variant	USP42	GRCh38.p7	7:6133932	gtcttgctctgtcgc[C/G]caggctggagtgcag	84132
rs6977856	snp	C/T	0.02016	0.0983543	intron-variant	USP42	GRCh38.p7	7:6144696	cgaacgtggcaaagc[C/T]ctgtttctactaaaa	84132
rs6979025	snp	G/T	0.489665	0.0711382	intron-variant	USP42	GRCh38.p7	7:6130458	gggaggccatagtgg[G/T]ggcagagtttagagg	84132
rs6979838	snp	C/T	0.426966	0.176587	intron-variant	USP42	GRCh38.p7	7:6109847	ttgagattacaggta[C/T]gtgccaccacgcccg	84132
rs7456787	snp	C/T	0.302184	0.244493	intron-variant	USP42	GRCh38.p7	7:6096361	gacagtagggtttta[C/T]ggggtgatggagagg	84132
rs7777264	snp	A/C	0.455263	0.142713	intron-variant	USP42	GRCh38.p7	7:6157748	TTGCTCGCTTGGTTC[A/C]TTAGAAGCGTGGGCA	84132
rs7778839	snp	A/T	0.0381033	0.132664	intron-variant	USP42	GRCh38.p7	7:6144043	CCACAAATTGTGTGT[A/T]TATATTCGTCTTCTT	84132
rs7780867	snp	A/T	0.492533	0.0606443	intron-variant	USP42	GRCh38.p7	7:6148835	CCAGCGGGCTCCCCT[A/T]TTGGGCTCTGCTCCA	84132
rs7781006	snp	C/T	0.0573587	0.15934	intron-variant	USP42	GRCh38.p7	7:6110945	CAGATTATCATGATG[C/T]TAAATGTCCCAAGGG	84132
rs7783538	snp	C/T	0.159292	0.232964	intron-variant	USP42	GRCh38.p7	7:6159535	CATTGTTTGTGGTGG[C/T]GCTGAGGGGACGCAG	84132
rs7784072	snp	C/G	0.0470042	0.14592	synonymous-codon	USP42	GRCh38.p7	7:6154635	CCGACACCGGAGCGG[C/G]GTGGAGCTGGACTGG	84132
rs7785639	snp	C/T	0.423881	0.179625	intron-variant	USP42	GRCh38.p7	7:6095435	agcactttggcaggt[C/T]gaggcaggcagatca	84132
rs7788049	snp	A/T	0.489201	0.0726845	intron-variant	USP42	GRCh38.p7	7:6107865	TTTGATTGATTTAAA[A/T]TTTCAATTCAGTTTT	84132
rs7790350	snp	C/T	0.276267	0.248616	intron-variant	USP42	GRCh38.p7	7:6126249	taataattctttcat[C/T]ggtaggtagtatttc	84132
rs7794907	snp	G/T	0.0236746	0.106192	intron-variant, upstream-variant-2KB	USP42	GRCh38.p7	7:6113765	tagctgggactacag[G/T]tgcctgccaccacac	84132
rs7796322	snp	A/G	0.171057	0.237209	intron-variant	USP42	GRCh38.p7	7:6128024	aatcctcaaaatcct[A/G]catcatcaaaatttt	84132
rs7803199	snp	A/G	0.0829062	0.185956	intron-variant	USP42	GRCh38.p7	7:6156599	ggactacaggtgtgc[A/G]ccaccatacctggcC	84132
rs7806564	snp	A/G	0.243347	0.249911	intron-variant	USP42	GRCh38.p7	7:6079407	AGCTTGCAGTGAGCC[A/G]AGATTGGGCCACTGC	84132
rs7810368	snp	A/G	0.482905	0.0908579	intron-variant	USP42	GRCh38.p7	7:6136224	GGTCAGGCTGGTCTC[A/G]AACTCCTGACCTCAG	84132
rs7811993	snp	C/T			intron-variant	USP42	GRCh38.p7	7:6110042	tctcaccatgttggc[C/T]aggctggtctcaaac	84132
rs8180843	snp	C/T	0	0	intron-variant	USP42	GRCh38.p7	7:6096213	CGTGGTGGCTCACGC[C/T]TGTAATCCCAGCACT	84132
rs8180844	snp	C/T	0	0	intron-variant	USP42	GRCh38.p7	7:6096440	ATGCAGTGAGTCATC[C/T]TGCCAGCCCATAGGT	84132
rs9640015	snp	C/G	0.397813	0.201621	intron-variant	USP42	GRCh38.p7	7:6079293	GAAACCCCATCTCTA[C/G]TAAAAATACAAAAAA	84132
rs9648587	snp	A/G	0.225005	0.248747	intron-variant	USP42	GRCh38.p7	7:6134748	TCTGTGGCCAGCAAC[A/G]CCAGAGTATTTACAC	84132
rs9648588	snp	A/G	0.249603	0.25	intron-variant	USP42	GRCh38.p7	7:6155394	CTGCTTTGAAGCTGT[A/G]TCTTTATTCTTCATG	84132
rs9655493	snp	A/G	0.171057	0.237209	intron-variant	USP42	GRCh38.p7	7:6133802	tgggatgacaggcgt[A/G]agccaccgcacctgg	84132
rs9791591	snp	C/T	0.188946	0.24243	intron-variant	USP42	GRCh38.p7	7:6158097	AAGAATGGTTTTAAC[C/T]TTTTTAAGTGGTTGG	84132
rs9886265	snp	A/G	0.499477	0.0161657	intron-variant	USP42	GRCh38.p7	7:6121430	aacagttttgtcttc[A/G]taagtattattagcc	84132
rs10046499	snp	A/G	0.138207	0.223612	intron-variant	USP42	GRCh38.p7	7:6140433	TCCATTTGTCTCTTC[A/G]TATTAGCAGTCTTTT	84132
rs10216107	snp	C/T	0.129664	0.219133	intron-variant	USP42	GRCh38.p7	7:6141049	TATGTAACTGTAGTT[C/T]ATTTATAATTTAGAC	84132

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