SPSB2
DNA & RNA Element - UTRdb
Gene NameTypeASPicDBUTRaspicRefseq IDGenome
SPSB23'UTRc0b3dc189eBA103617NM_001146316chr12:6850360-6852325:-
SPSB23'UTR5c19291a29BA103618NM_001146316chr12:6850360-6852325:-
SPSB25'UTRc0b3dc189eCA163227NM_001146316chr12:6850618-6852713:-
SPSB25'UTR5c19291a29CA163228NM_001146316chr12:6850618-6852710:-
DNA & RNA Element - circBase
circRNA IDChromStartEndStrand
hsa_circ_0025281chr1269800996982449-
DNA & RNA Element - CircNet
Circ IDGITPositionExpressSymbolEntrezCategoryStrandRefered Name
hsa-circ-SPSB2-overlap.4NM_001319670Tchr12:6981827-6982150expressedSPSB284727protein-coding-hsa_circ_0099119
hsa-circ-SPSB2.1NM_001146316Tchr12:6980099-6982449noneSPSB284727protein-coding-hsa_circ_0025281
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G035378SPSB2Homo sapiens84727
DNA & RNA Element - TargetScan
Gene NameUTR Region StartUTR Region EndAIRTotal Normalized 3P-seq-tags & PseudocountsStrandhg19_chromosomeGenome StartGenome End
SPSB2; GRCC9; SSB21253100189.408-chr1269801026980355
SPSB2; GRCC9; SSB225425594.778189.408-chr1269801006980102
SPSB2; GRCC9; SSB22562572.645189.408-chr1269800986980100
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
SPSB2hsa-miR-519ebeg:57end:71pic:3' TTGTGAGATTTTCCTCCGTGAA 5'& ..||||||||| &5' ----------GGGGAGGCACT- 3'
SPSB2hsa-miR-1224-3pbeg:49end:64pic:3' GACTCCTCTCTCCTCCACCCC 5'& |.|||||||||| &5' ---------GGGGAGGTGGGG 3'
SPSB2kshv-miR-K12-10astarbeg:119end:130pic:3' TCACCACCATAGCGGGGTTCGG 5'& |||||||. &5' --------------CCCAAGCT 3'
SPSB2hsa-miR-220cbeg:0end:9pic:3' TCAGAAGTGTTGTCGGGACACA 5'& |||||||| &5' -------------GCCCTGTG- 3'
SPSB2hsa-miR-513a-5pbeg:0end:10pic:3' TACTGTGGAGGGACACTT 5'& |||||||| &5' ---------CCCTGTGA- 3'
SPSB2hsa-miR-24beg:93end:112pic:3' GACAAGGACGACT-TGACTCGGT 5'& ||| ||| .||||||| &5' ------CTGGTGAGGCTGAGCC- 3'
SPSB2hsa-miR-4283beg:101end:114pic:3' TTTGAGCGACTCGGGGT 5'& |||||||||| &5' ------GCTGAGCCCC- 3'
SPSB2hsa-miR-19b-1starbeg:198end:217pic:3' CGACCTACGTTTGGA-CGTTTTGA 5'& |. .|. ||||||| &5' -------GTCTGCTACGCAAAAC- 3'
SPSB2hsa-miR-19b-2starbeg:198end:217pic:3' ACTTTACGTTTGGA-CGTTTTGA 5'& |. .|. ||||||| &5' ------GTCTGCTACGCAAAAC- 3'
SPSB2hsa-miR-1226beg:92end:103pic:3' GATCCCTTGTGTCCCGACCACT 5'& |||||||| &5' --------------GCTGGTGA 3'
SPSB2hcmv-miR-UL22Astarbeg:81end:103pic:3' GATGTTTGATCGTAA---GACCACT 5'& |.|| || ||||||| &5' -----AGCT-GCTGAAAGCTGGTGA 3'
SPSB2hcmv-miR-UL70-5pbeg:93end:111pic:3' AGACCTGCTCCGGCTCTGCGT 5'& |||| .|||||.||| | &5' -CTGG-TGAGGCTGAG-C--- 3'
SPSB2hcmv-miR-US25-2-5pbeg:0end:23pic:3' AGTAGGTGGACT----TGTCTGGCGA 5'& || . ||| ||||||.|. &5' ----CCCTGTGATACCACAGACTGT- 3'
SPSB2hsa-let-7a-2starbeg:88end:111pic:3' CCTTTCGATC-CTCCGACATGTC 5'& |||||||.| ||||||| .| &5' -GAAAGCTGGTGAGGCTGAGC-- 3'
SPSB2hsa-miR-103-2starbeg:158end:181pic:3' GTTCCGTCGTGACATTTCTTCGA 5'& .||| || | ||.|.||| &5' -GAGGGAGGAAGA-AAGGGAGC- 3'
SPSB2hsa-miR-1227beg:48end:70pic:3' GACCCCTTT-TCCCACCGTGC 5'& ||||||.. .||| ||||| &5' -TGGGGAGGTGGGGAGGCAC- 3'
SPSB2hsa-miR-1229beg:88end:105pic:3' GACACCCTCCCGTCACCACTCTC 5'& || || |||||||. &5' ------GAAAGC--TGGTGAGG- 3'
SPSB2hsa-miR-1234beg:94end:109pic:3' CACCCCACCCACCAGTCCGGCT 5'& |||| ||||.|| &5' ----------TGGTGAGGCTGA 3'
SPSB2hsa-miR-125b-1starbeg:141end:161pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& ||| ||| |||||| ||..| &5' AGC-CCC-AGAGCC--ACTTG- 3'
SPSB2hsa-miR-1260beg:48end:64pic:3' ACCACCGTCTCCACCCTA 5'& ||| .||||||||. &5' ---TGG-GGAGGTGGGG- 3'
SPSB2hsa-miR-1260bbeg:48end:64pic:3' TACCACCGTCACCACCCTA 5'& ||| || ||||||. &5' -TGG-GGA---GGTGGGG- 3'
SPSB2hsa-miR-1281beg:50end:68pic:3' CCCTCTCCTCCTCCGCT 5'& |||||. |.|||||| &5' GGGAGGTGGGGAGGC-- 3'
SPSB2hsa-miR-1282beg:162end:186pic:3' TTCG-TCTTTTTC-CGTTTGCT 5'& .|| |||||..| || .|| &5' GAGGAAGAAAGGGAGCCGGCG- 3'
SPSB2hsa-miR-1306beg:142end:161pic:3' GTGGTGGTCTCGGTT-GCA 5'& .|| ||||||||| .| &5' -GCC-CCAGAGCCACTTG- 3'
SPSB2hsa-miR-1308beg:145end:160pic:3' GGTGACTTGGTGGGTACG 5'& ||| ||.||||.. &5' CCA--GAGCCACTT---- 3'
SPSB2hsa-miR-130bstarbeg:158end:178pic:3' CATCACGTTGTCC--CTTTCTCA 5'& | . ||| |||||.| &5' -----GAGGGAGGAAGAAAGGG- 3'
SPSB2hsa-miR-130bstarbeg:150end:168pic:3' CATCACGTTGTCCCTTTCTCA 5'& || || |||..||| &5' -----GCCACTTGGAGGGAG- 3'
SPSB2hsa-miR-151-3pbeg:183end:206pic:3' GGAGTTCCTCGAA-GTCAGATC 5'& .|||||| ||||||. &5' -TTCAAGGCTATGACAGTCTG- 3'
SPSB2hsa-miR-154beg:59end:80pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& |.||||| .| |..|||| &5' -GGAGGCACTGC---TGGCCTA 3'
SPSB2hsa-miR-1825beg:51end:71pic:3' CCTCT-CCTC-CCGTGACCT 5'& ||||. ||.| ||||||| &5' GGAGGTGGGGAGGCACTG-- 3'
SPSB2hsa-miR-1910beg:53end:76pic:3' TCCG-CCGTCCGTGTCCTGACC 5'& |||. || |||||| .|||| &5' AGGTGGGGAGGCACT--GCTGG 3'
SPSB2hsa-miR-194beg:237end:253pic:3' AGGTGTACCTCAACGACAATGT 5'& ||| ||.|||||.| &5' --------GAGATGTTGTTATA 3'
SPSB2hsa-miR-19astarbeg:197end:217pic:3' ACATCACGTTGATACGTTTTGA 5'& ||| | .||| ||||||| &5' ---AGT-CTGCTACGCAAAAC- 3'
SPSB2hsa-miR-200cstarbeg:92end:106pic:3' GGTTTGTGACGACCCATTCTGC 5'& ||| |||.||.| &5' ---------GCT-GGTGAGGC- 3'
SPSB2hsa-miR-204beg:157end:180pic:3' TCCGTATCCTACTG-TTTCCCTT 5'& || .||| || |||||||. &5' -GGA--GGGAGGAAGAAAGGGAG 3'
SPSB2hsa-miR-2052beg:195end:217pic:3' TGTAATGACAATA-GTTTTGT 5'& ||| ||| ||||||| &5' ACAGT-CTGCTACGCAAAACA 3'
SPSB2hsa-miR-211beg:158end:180pic:3' TCCGCTTCCTACTG-TTTCCCTT 5'& ||.||| || |||||||. &5' ----GAGGGAGGAAGAAAGGGAG 3'
SPSB2hsa-miR-23astarbeg:133end:156pic:3' TTTAGG-GTAGGGGTCCTTGGGG 5'& ||||| || ||||| ||.|| &5' AAATCAACAGCCCCA-GAGCC-- 3'
SPSB2hsa-miR-27abeg:0end:10pic:3' CGCCTTGAATCGGTGACACTT 5'& ||| |||||| &5' ----------GCC-CTGTGA- 3'
SPSB2hsa-miR-27astarbeg:92end:113pic:3' ACGAGTGTTCGTCGATTCGGGA 5'& ||| . || |||.||||| &5' -GCTGGTGAG--GCTGAGCCC- 3'
SPSB2hsa-miR-27bbeg:0end:10pic:3' CGTCTTGAATCGGTGACACTT 5'& ||| |||||| &5' ----------GCC-CTGTGA- 3'
SPSB2hsa-miR-3065-3pbeg:9end:28pic:3' GAGGTTGTTATAGGACCACGACT 5'& || |||. || ||||||| &5' --CC-ACAGA---CT-GTGCTGA 3'
SPSB2hsa-miR-31beg:16end:37pic:3' TCGATACGGTCGTAGAACGGA 5'& ||.|||.. .||||||| &5' --CTGTGCTGAGGTCTTGCC- 3'
SPSB2hsa-miR-3183beg:47end:68pic:3' AGGCTCGCTGAGGCTCTCTCCG 5'& || | |. .|.||||| &5' -CCTTGGGGAGGT-GGGGAGGC 3'
SPSB2hsa-miR-330-5pbeg:131end:154pic:3' CGGATTCTG----TGTCCGGGTCTCT 5'& .|| |||| ||||||| &5' -----GGAAATCAACAGCCCCAGAG- 3'
SPSB2hsa-miR-338-5pbeg:231end:251pic:3' GTGAGTCGTGGTC-CTATAACAA 5'& .||.| || |||.||||| &5' ----TAGTA--AGAGATGTTGTT 3'
SPSB2hsa-miR-33bstarbeg:50end:71pic:3' CCCGACGTGACGGCTCCGTGAC 5'& ||| . || ||||||||| &5' GGGA---GGTGGGGAGGCACTG 3'
SPSB2hsa-miR-4257beg:102end:120pic:3' GAGTCAGGGGTGGAGACC 5'& || || |||.||| | &5' CTGAGCCCCTACCCC--- 3'
SPSB2hsa-miR-4260beg:131end:152pic:3' AC-CCTGAGGTA--CGGGGTTC 5'& | ||| .|| ||||||. &5' -GCGGAAATCAACAGCCCCAG- 3'
SPSB2hsa-miR-4263beg:142end:164pic:3' CCGG---TTCCGTGAATCTTA 5'& ||| .|| |||||.||. &5' -GCCCCAGAGCCACTTGGAG- 3'
SPSB2hsa-miR-4264beg:95end:110pic:3' TTACTGGTACTGACTCA 5'& ..||| |.||||| &5' GGTGA----GGCTGAG- 3'
SPSB2hsa-miR-4274beg:54end:75pic:3' GTC-CCCCTCCCTGACGAC 5'& .| ||||||| ||||||| &5' -GGTGGGGAGGCACTGCTG 3'
SPSB2hsa-miR-4283beg:141end:151pic:3' TTTGAGCGACTCGGGGT 5'& ||||||| &5' ----------AGCCCCA 3'
SPSB2hsa-miR-4290beg:158end:178pic:3' CTCCCTTCTTTCCTCCCGT 5'& ||||||.|||. |||| &5' GAGGGAGGAAGAAAGGG-- 3'
SPSB2hsa-miR-4296beg:97end:113pic:3' ACTCGGACTCGGGTGTA 5'& |||| |||||||| &5' TGAGGCTGAGCCC---- 3'
SPSB2hsa-miR-4323beg:86end:108pic:3' AGACTC-CGA-CACCCCGAC 5'& |||| ||| ||| ||||| &5' -CTGAAAGCTGGTGAGGCTG 3'
SPSB2hsa-miR-432starbeg:51end:71pic:3' TCTGTACCTCCTCGGTAGGTC 5'& .|| .||| |||| || |. &5' GGAGGTGG-GGAGGCA-CT-- 3'
SPSB2hsa-miR-516a-3pbeg:55end:69pic:3' TGGGAGACTTTCCTTCGT 5'& | .|||.||| &5' -------GTGGGGAGGCA 3'
SPSB2hsa-miR-516bstarbeg:55end:69pic:3' TGGGAGACTTTCCTTCGT 5'& | .|||.||| &5' -------GTGGGGAGGCA 3'
SPSB2hsa-miR-601beg:66end:84pic:3' GAGGAGGTTGTTAGGATCTGGT 5'& | .| ||||||||| &5' ------CTGCTGGCCTAGACCA 3'
SPSB2hsa-miR-608beg:23end:45pic:3' TGCCTCGACAGGGTTGTGGTGGGGA 5'& ||| |||.. |||||||||| &5' ---GAG--GTCTTGCCACCACCCCT 3'
SPSB2hsa-miR-621beg:57end:78pic:3' TCCATTCGCGACAACGATCGG 5'& || || || ||||.||| &5' -GGGGAG-GCAC-TGCTGGCC 3'
SPSB2hsa-miR-653beg:231end:253pic:3' GTCA-TCTCTAACAAAGTTGTG 5'& .||| ||||| |||| |.| &5' TAGTAAGAGA-TGTTGTTATA- 3'
SPSB2hsa-miR-657beg:93end:118pic:3' GGATCTCTCCCACTCTTGGACGG 5'& ||.| |||| |||| ||| || &5' -CTGGTGAGGCTGAGCCCCTACC 3'
SPSB2hsa-miR-760beg:136end:156pic:3' AGGGGTGTCTGGGTCTCGGC 5'& .| |||| ||||||||| &5' --TCAACAGCCCCAGAGCC- 3'
SPSB2hsa-miR-876-3pbeg:19end:41pic:3' ACTTAATGAAA-CATT-TGGTGGT 5'& |.|| || .|||||| &5' -----TGCTGAGGTCTTGCCACCA 3'
SPSB2hsa-miR-890beg:215end:230pic:3' GTTGACTACGGAAAGGTTCAT 5'& ..|||.|||||| &5' ---------TTTTTTCAAGTA 3'
DNA & RNA Element - SomamiR
Gene NameMutationMutation IDmiR IDChromosomeLocationRefAltmirsitemirseedSeed ClassSample NameCancer Type
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-101-3pchr126871125CTggggagGTACTGctgUACAGUACm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-1271-3pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-1281chr126871125CTggGGAGGCactgctgUCGCCUCCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-130a-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-130b-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-148a-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-148b-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-152-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-1825chr126871125CTggggagGCACTGctgUCCAGUGCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-1909-5pchr126871125CTggggaGGCACTgctgUGAGUGCCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-1911-5pchr126871125CTggggaGGTACTgctgUGAGUACCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-301a-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-301b-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-3129-5pchr126871125CTggggaggTACTGCtgGCAGUAGUm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-3152-5pchr126871125CTgggGAGGCActgctgAUUGCCUCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-33b-3pchr126871125CTggggAGGCACTGctgCAGUGCCUm8aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-34a-5pchr126871125CTggggaggCACTGCtgUGGCAGUGm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-34c-5pchr126871125CTggggaggCACTGCtgAGGCAGUGm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-3666chr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-371a-3pchr126871125CTggggaGGCACTgctgAAGUGCCGm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-371b-3pchr126871125CTggggaGGCACTgctgAAGUGCCCm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-4295chr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-449achr126871125CTggggaggCACTGCtgUGGCAGUGm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-449b-5pchr126871125CTggggaggCACTGCtgAGGCAGUGm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-4519chr126871125CTggggaggCACTGCTgCAGCAGUGm7bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-4712-5pchr126871125CTggggagGTACTGctgUCCAGUACm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-4724-3pchr126871125CTggggAGGTACtgctgGUACCUUCm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-4777-3pchr126871125CTgggGAGGTActgctgAUACCUCAm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-515-3pchr126871125CTggggAGGCACTgctgGAGUGCCUm7bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-519e-3pchr126871125CTggggAGGCACTgctgAAGUGCCUm7bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-550a-3-5pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-550a-5pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-550b-2-5pchr126871125CTggggAGGCACtgctgAUGUGCCUm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-5693chr126871125CTggggaggCACTGCtgGCAGUGGCm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-624-5pchr126871125CTggggaGGTACTgctgUAGUACCAm6bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6499-3pchr126871125CTggggaggCACTGCTgAGCAGUGUm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-660-3pchr126871125CTggGGAGGTactgctgACCUCCUGm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6778-3pchr126871125CTgGGGAGGCActgctgUGCCUCCCm8aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6781-3pchr126871125CTgggGAGGCActgctgUGCCUCUUm6aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6791-3pchr126871125CTggGGAGGCActgctgUGCCUCCUm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6829-3pchr126871125CTggGGAGGCActgctgUGCCUCCUm7aPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-6836-3pchr126871125CTggGGAGGCActgctgAUGCCUCCm7bPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-770-5pchr126871125CTggggagGTACTGctgUCCAGUACm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN4892226hsa-miR-875-5pchr126871125CTgggGAGGTActgctgUAUACCUCm6cPCSI_0090_Pa_P[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-101-3pchr126871125CTggggagGTACTGctgUACAGUACm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-1271-3pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-1281chr126871125CTggGGAGGCactgctgUCGCCUCCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-130a-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-130b-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-148a-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-148b-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-152-3pchr126871125CTggggagGCACTGctgUCAGUGCAm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-1825chr126871125CTggggagGCACTGctgUCCAGUGCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-1909-5pchr126871125CTggggaGGCACTgctgUGAGUGCCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-1911-5pchr126871125CTggggaGGTACTgctgUGAGUACCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-301a-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-301b-3pchr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-3129-5pchr126871125CTggggaggTACTGCtgGCAGUAGUm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-3152-5pchr126871125CTgggGAGGCActgctgAUUGCCUCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-33b-3pchr126871125CTggggAGGCACTGctgCAGUGCCUm8aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-34a-5pchr126871125CTggggaggCACTGCtgUGGCAGUGm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-34c-5pchr126871125CTggggaggCACTGCtgAGGCAGUGm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-3666chr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-371a-3pchr126871125CTggggaGGCACTgctgAAGUGCCGm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-371b-3pchr126871125CTggggaGGCACTgctgAAGUGCCCm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-4295chr126871125CTggggagGCACTGctgCAGUGCAAm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-449achr126871125CTggggaggCACTGCtgUGGCAGUGm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-449b-5pchr126871125CTggggaggCACTGCtgAGGCAGUGm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-4519chr126871125CTggggaggCACTGCTgCAGCAGUGm7bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-4712-5pchr126871125CTggggagGTACTGctgUCCAGUACm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-4724-3pchr126871125CTggggAGGTACtgctgGUACCUUCm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-4777-3pchr126871125CTgggGAGGTActgctgAUACCUCAm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-515-3pchr126871125CTggggAGGCACTgctgGAGUGCCUm7bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-519e-3pchr126871125CTggggAGGCACTgctgAAGUGCCUm7bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-550a-3-5pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-550a-5pchr126871125CTggggAGGCACTgctgAGUGCCUGm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-550b-2-5pchr126871125CTggggAGGCACtgctgAUGUGCCUm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-5693chr126871125CTggggaggCACTGCtgGCAGUGGCm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-624-5pchr126871125CTggggaGGTACTgctgUAGUACCAm6bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6499-3pchr126871125CTggggaggCACTGCTgAGCAGUGUm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-660-3pchr126871125CTggGGAGGTactgctgACCUCCUGm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6778-3pchr126871125CTgGGGAGGCActgctgUGCCUCCCm8aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6781-3pchr126871125CTgggGAGGCActgctgUGCCUCUUm6aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6791-3pchr126871125CTggGGAGGCActgctgUGCCUCCUm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6829-3pchr126871125CTggGGAGGCActgctgUGCCUCCUm7aPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-6836-3pchr126871125CTggGGAGGCActgctgAUGCCUCCm7bPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-770-5pchr126871125CTggggagGTACTGctgUCCAGUACm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
SPSB2chr12:g.6871125C>TCOSN14654122hsa-miR-875-5pchr126871125CTgggGAGGTActgctgUAUACCUCm6cPCSI_0090_Pa_X[pancreas][NS][carcinoma][NS]
DNA & RNA Element - miRcode
Gene NameTypemicroRNASeed PositionSeed TypeTotal Cons%Tr Region
SPSB2High_conservedmiR-503chr12:69816947-mer-m840CDS
SPSB2High_conservedmiR-132/212/212-3pchr12:69819057-mer-m813CDS
SPSB2High_conservedmiR-7/7abchr12:69984827-mer-A19ncRNA
SPSB2High_conservedmiR-133abcchr12:69866717-mer-A175pUTR, ncRNA
SPSB2High_conservedmiR-9/9abchr12:69819117-mer-A111CDS
SPSB2High_conservedmiR-137/137abchr12:69812207-mer-m8203pUTR
SPSB2High_conservedmiR-139-5pchr12:69808047-mer-A193pUTR
SPSB2High_conservedmiR-140/140-5p/876-3p/1244chr12:69817077-mer-A142CDS
SPSB2High_conservedmiR-143/1721/4770chr12:69913797-mer-A195pUTR, ncRNA
SPSB2High_conservedmiR-145chr12:69821347-mer-m8165pUTR
SPSB2High_conservedmiR-146ac/146b-5pchr12:69811797-mer-m8133pUTR
SPSB2High_conservedmiR-148ab-3p/152chr12:69818397-mer-A131CDS
SPSB2High_conservedmiR-150/5127chr12:69817897-mer-A160CDS
SPSB2High_conservedmiR-192/215chr12:69818877-mer-A131CDS
SPSB2High_conservedmiR-192/215chr12:69821467-mer-A1115pUTR
SPSB2High_conservedmiR-193/193b/193a-3pchr12:69811708-mer113pUTR
SPSB2High_conservedmiR-193/193b/193a-3pchr12:69814377-mer-m840CDS
SPSB2High_conservedmiR-199ab-5pchr12:69809357-mer-m893pUTR
SPSB2High_conservedmiR-204/204b/211chr12:69801777-mer-m873pUTR
SPSB2High_conservedmiR-214/761/3619-5pchr12:69802647-mer-A193pUTR
SPSB2High_conservedmiR-221/222/222ab/1928chr12:69849557-mer-A19ncRNA
SPSB2High_conservedmiR-223chr12:69808507-mer-m8203pUTR
SPSB2High_conservedmiR-122/122a/1352chr12:69804697-mer-m842CDS
SPSB2High_conservedmiR-24/24ab/24-3pchr12:69802447-mer-m873pUTR
SPSB2High_conservedmiR-24/24ab/24-3pchr12:69804537-mer-m842CDS
SPSB2High_conservedmiR-31chr12:69803198-mer183pUTR
SPSB2High_conservedmiR-125a-5p/125b-5p/351/670/4319chr12:69815927-mer-m831CDS
SPSB2High_conservedmiR-129-5p/129ab-5pchr12:69985157-mer-A17ncRNA
SPSB2Medium_conservedmiR-539/539-5pchr12:69811877-mer-A1113pUTR
SPSB2Medium_conservedmiR-590-3pchr12:69985047-mer-A12ncRNA
SPSB2Medium_conservedmiR-615-3pchr12:69804137-mer-m89CDS
SPSB2Medium_conservedmiR-136chr12:69809427-mer-A193pUTR
SPSB2Medium_conservedmiR-136chr12:69811467-mer-m8243pUTR
SPSB2Medium_conservedmiR-149chr12:69810327-mer-m8113pUTR
SPSB2Medium_conservedmiR-197chr12:69811617-mer-A1293pUTR
SPSB2Medium_conservedmiR-197chr12:69984967-mer-A17ncRNA
SPSB2Medium_conservedmiR-224chr12:69850027-mer-m811ncRNA
SPSB2Medium_conservedmiR-28-5p/708/1407/1653/3139chr12:69820727-mer-m8165pUTR
SPSB2Medium_conservedmiR-299/299-3p/3563-3pchr12:69809787-mer-A1163pUTR
SPSB2Medium_conservedmiR-299/299-3p/3563-3pchr12:69867117-mer-m875pUTR, ncRNA
SPSB2Medium_conservedmiR-326/330/330-5pchr12:69802027-mer-m8223pUTR
SPSB2Medium_conservedmiR-326/330/330-5pchr12:69815707-mer-A131CDS
SPSB2Medium_conservedmiR-326/330/330-5pchr12:69818447-mer-m847CDS
SPSB2Medium_conservedmiR-328a/328b-3pchr12:69807927-mer-m8133pUTR
SPSB2Medium_conservedmiR-346chr12:69813837-mer-m87CDS
SPSB2Medium_conservedmiR-370chr12:69808747-mer-m873pUTR
SPSB2Medium_conservedmiR-378/422a/378bcdefhichr12:69867497-mer-m8135pUTR, ncRNA
SPSB2Medium_conservedmiR-379/1193-5p/3529chr12:69803607-mer-A162CDS
SPSB2Medium_conservedmiR-411chr12:69849927-mer-m811ncRNA
SPSB2Medium_conservedmiR-125a-3p/1554chr12:69804577-mer-A149CDS
SPSB2Medium_conservedmiR-450a/451achr12:69801417-mer-A1113pUTR
SPSB2Medium_conservedmiR-486-5p/3107chr12:69810587-mer-m893pUTR
SPSB2Medium_conservedmiR-491-5pchr12:69867138-mer135pUTR, ncRNA
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
SPSB2RAID00003478hsa-miR-346miRNAMIMAT0000773SPSB2mRNA84727CLIP-seq//Prediction0.6308
SPSB2RAID00635047hsa-miR-185-3pmiRNAMIMAT0004611SPSB2mRNA84727Prediction0.1828
SPSB2RAID01524330hsa-miR-4291miRNAMIMAT0016922SPSB2mRNA84727Prediction0.1828
SPSB2RAID01811003hsa-miR-4283miRNAMIMAT0016914SPSB2mRNA84727Prediction0.1828
SPSB2RAID02048423hsa-miR-410-3pmiRNAMIMAT0002171SPSB2mRNA84727Prediction0.1828
SPSB2RAID03087873hsa-miR-31-5pmiRNAMIMAT0000089SPSB2mRNA84727CLIP-seq//Prediction0.6308
SPSB2RAID04494300TUG1lncRNA55000SPSB2protein84727Microarray//RNA-seq0.6606