iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs1049817	snp	C/T	0.487702	0.0774464	synonymous-codon	GTF3C2	GRCh38.p7	2:27328100	GGTCCCCAACCCTCC[C/T]AAGGCTCGAACTTAC	2976
rs1049831	snp	C/G/T	0.000399281	0.0141238	utr-variant-3-prime	GTF3C2	GRCh38.p7	2:27326518	TAGATCCCACTCTTT[C/G/T]TACAGACTTCTGTGA	2976
rs1049836	snp	A/C	0	0	utr-variant-3-prime	GTF3C2	GRCh38.p7	2:27326467	GGGGGCTCTCCCTCC[A/C]CCAACTCTCAAGGCT	2976
rs1804410	snp	C/T	9.90802e-05	0.00703778	synonymous-codon	GTF3C2	GRCh38.p7	2:27328901	GATTCATTATATTGA[C/T]GCTGGTTACCTTGGT	2976
rs3739095	snp	A/G	0.499598	0.0141716	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27333854	CGAAAGCTCAAATCA[A/G]TGCTTAATCCAGCAG	2976
rs4507056	snp	A/G	0	0	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27334220	ttTTTTTTTCCTTTA[A/G]ACCTCCTCTGTGGAC	2976
rs4665969	snp	C/T	0.459914	0.13578	intron-variant	GTF3C2	GRCh38.p7	2:27352086	TGTATCAAGCCACTA[C/T]CCCTTGATCTCTCCA	2976
rs6721927	snp	A/G	0.0450428	0.143152	intron-variant	GTF3C2	GRCh38.p7	2:27328458	TGCTGTTAGATGTTC[A/G]TATACGTACAAATCT	2976
rs6732797	snp	A/G			intron-variant	GTF3C2	GRCh38.p7	2:27340007	aaaaaaaaaaaaaaa[A/G]gggaaaaaaGAAAGT	2976
rs6743819	snp	G/T	0.490618	0.0678448	intron-variant	GTF3C2	GRCh38.p7	2:27344540	AGAAAAATTTGTCTA[G/T]CATGAATCTAGGAAA	2976
rs6760828	snp	C/T	0.492775	0.059668	intron-variant, utr-variant-5-prime, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27356364	TCCTGGGCGTGAAGG[C/T]AGATTTCTCCCCTAG	2976
rs7559312	snp	A/T	0.0685596	0.171987	intron-variant	GTF3C2	GRCh38.p7	2:27333517	GACTTATTTCTTTCT[A/T]TTTTTTTTTTTTTAC	2976
rs9711708	snp	A/C	0.0885546	0.190881	intron-variant	GTF3C2	GRCh38.p7	2:27346330	tgcccATTCTGATAC[A/C]TTTTTTTTTtttttt	2976
rs10184546	snp	C/T	0.0766824	0.180169	intron-variant	GTF3C2	GRCh38.p7	2:27338312	TCTTTGAAACTCCCG[C/T]CCTATGGAATAGTCT	2976
rs10187853	snp	C/T			intron-variant	GTF3C2	GRCh38.p7	2:27339289	gtgtgcacccgtaat[C/T]tcagctacttgggag	2976
rs10199436	snp	A/T	0.00953873	0.0683987	intron-variant	GTF3C2	GRCh38.p7	2:27338500	cctggtaatctcatc[A/T]catgtcccatggctt	2976
rs10203609	snp	C/T	0.0119091	0.0762411	intron-variant	GTF3C2	GRCh38.p7	2:27349393	acctcgtgatccgcc[C/T]gccgcggcctcccaa	2976
rs10203610	snp	C/T	0.040671	0.13668	intron-variant	GTF3C2	GRCh38.p7	2:27349398	gtgatccgcccgccg[C/T]ggcctcccaaagtgc	2976
rs10205219	snp	C/T	0.490618	0.0678448	intron-variant	GTF3C2	GRCh38.p7	2:27345698	AGGAACATCCTATTA[C/T]GTTAAGAAAGCTTTT	2976
rs10205592	snp	C/T	0.499891	0.00738737	intron-variant	GTF3C2	GRCh38.p7	2:27346004	ACAGACTTGAGCCAC[C/T]GTGCCCCGCCACTTT	2976
rs11126975	snp	C/T	0.459914	0.13578	intron-variant	GTF3C2	GRCh38.p7	2:27344122	ctccacctcctgggt[C/T]caagcaattctcctg	2976
rs11399437	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27354072	AAAAAAAAAAAAAAA[-/A]GGGTGGGAGCCTGGA	2976
rs11684134	snp	A/G	0.492453	0.0609623	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27335385	GAAGAAGGGGGAGAT[A/G]AAAGGAAATGTGCTG	2976
rs11689803	snp	A/T	0.194902	0.243853	intron-variant	GTF3C2	GRCh38.p7	2:27343653	TTTATTTCCCCATCT[A/T]TTCTCCCTCATTCTC	2976
rs11693959	snp	C/T	0.194902	0.243853	intron-variant	GTF3C2	GRCh38.p7	2:27351292	TGCCACGTGCACTTG[C/T]AGTCCCAGCTACTCA	2976
rs11694589	snp	C/T			intron-variant	GTF3C2	GRCh38.p7	2:27331463	cctgagtagctggga[C/T]tacaggcacgcgcca	2976
rs12991930	snp	C/T	0.0528381	0.153711	intron-variant	GTF3C2	GRCh38.p7	2:27353785	aatgcagtagtgcga[C/T]gatcatggctcactg	2976
rs13001133	snp	C/G	0	0	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27334675	tcagacagcatctca[C/G]taagccgcccaggct	2976
rs13010524	snp	G/T			intron-variant	GTF3C2	GRCh38.p7	2:27331366	ggagtctcactctgt[G/T]gccaggctggagtgc	2976
rs13023522	snp	A/C/T	0	0	intron-variant	GTF3C2	GRCh38.p7	2:27346311	ttataggtgttagcc[A/C/T]ccgtgcccATTCTGA	2976
rs13027615	snp	C/G			intron-variant	GTF3C2	GRCh38.p7	2:27331367	gagtctcactctgtt[C/G]ccaggctggagtgca	2976
rs13383752	snp	C/G	0.0023933	0.0345097	intron-variant	GTF3C2	GRCh38.p7	2:27345391	tgaggtcaggagttc[C/G]agaccagcctggcca	2976
rs13389668	snp	A/G	0.040671	0.13668	intron-variant, upstream-variant-2KB	GTF3C2, LOC105374363	GRCh38.p7	2:27355878	TTTATTTCAACTTAC[A/G]TAAACAATTATAAGT	2976
rs13411291	snp	C/T	0.0788843	0.182262	intron-variant	GTF3C2	GRCh38.p7	2:27341247	cactatattggtcag[C/T]ctggtctcaaactcc	2976
rs13419412	snp	A/G	0.0777841	0.181223	intron-variant	GTF3C2	GRCh38.p7	2:27330906	gatagaggttgcagt[A/G]agccaagatcatgcc	2976
rs13421050	snp	C/T	0.0402882	0.136092	intron-variant	GTF3C2	GRCh38.p7	2:27348624	gcctggccaacatag[C/T]gaaaccccatctcta	2976
rs17855487	snp	C/T	0	0	missense, downstream-variant-500B	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27337975	GAGCCATGATATGAT[C/T]TGGTAAGCCATTGGG	2976
rs28582307	snp	C/T	0.00199481	0.0315187	intron-variant	GTF3C2	GRCh38.p7	2:27353360	TGCACTCCAGCCTGG[C/T]GACAGAGCTAGACTC	2976
rs34002363	in-del	-/G			intron-variant	GTF3C2	GRCh38.p7	2:27343273	TCTTAAGCTTGGCAT[-/G]GGGGAATAAAAAGAT	2976
rs34013468	in-del	-/G			upstream-variant-2KB, intron-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27357158	CCGGCCGGACTGCCG[-/G]CGCCTGTGGCCGGAA	2976
rs34096601	snp	C/G			intron-variant	GTF3C2	GRCh38.p7	2:27339544	TGTTGCATCAAAATA[C/G]CATTTATCTCAATTA	2976
rs34211481	in-del	-/C			utr-variant-3-prime	GTF3C2	GRCh38.p7	2:27326555	CCTGGGGAGGCAGGC[-/C]TAAAGGTCCAGGCCT	2976
rs34264490	in-del	-/A	0.459687	0.136129	intron-variant	GTF3C2	GRCh38.p7	2:27350636	GTCTCTGCAAAAAAA[-/A]TTTTTTTTGAAAATT	2976
rs34328593	in-del	-/G			intron-variant	GTF3C2	GRCh38.p7	2:27340753	GCCTCCTGAGTAGCT[-/G]GGGATTACAGGCGTG	2976
rs34500864	in-del	-/G			intron-variant	GTF3C2	GRCh38.p7	2:27331916	GCACTCCAGCCTGGG[-/G]TGACAGAGTGAGACC	2976
rs34859572	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27344471	CTGTCTCTGAAACCC[-/A]ATGAAATAAAACACA	2976
rs34905178	in-del	-/T			intron-variant	GTF3C2	GRCh38.p7	2:27327505	GATTTTTTGTATTTT[-/T]AGTAGACAGGGTTTC	2976
rs35138190	in-del	-/C			intron-variant	GTF3C2	GRCh38.p7	2:27352273	AGCACTGGCAATCCC[-/C]ACTTTCTCTCTAGTC	2976
rs35325937	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27348286	AAAAAAAAAAAAAAA[-/A]CTAGCTGGGCATGGT	2976
rs35343018	in-del	-/T			intron-variant	GTF3C2	GRCh38.p7	2:27333337	TTTGTATTTTTTTGG[-/T]AGAGATAGGGTTTCG	2976
rs35471821	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27330141	GCAGACTCCGTCTCA[-/A]AAAAAAAAAAAAAAA	2976
rs35555901	in-del	-/T			intron-variant	GTF3C2	GRCh38.p7	2:27344846	AAAGTTAGCCGGGCA[-/T]TGGTGGTGCGCACCT	2976
rs35568684	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27326967	CCTAGCTGTATGAAC[-/A]AAAAAAAAAAATGAG	2976
rs35615796	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27326973	GTATGAACAAAAAAA[-/A]AAAAATGAGCCACAA	2976
rs35775873	in-del	-/G			intron-variant	GTF3C2	GRCh38.p7	2:27338724	TGTATTTTTTTGTAG[-/G]AGACAAGGTTTCGCC	2976
rs35790046	snp	A/G	0.0159397	0.0878396	synonymous-codon	GTF3C2	GRCh38.p7	2:27341966	GCCCCGAAGCACCCC[A/G]CGAGGATCTACTTCA	2976
rs35921404	in-del	-/G			utr-variant-3-prime	GTF3C2	GRCh38.p7	2:27326496	CCCTGCCCGCAGGGG[-/G]CTGTGATCACAGAAG	2976
rs35978802	in-del	-/T			frameshift-variant	GTF3C2	GRCh38.p7	2:27326879	TAGGAGTCCAGGTTT[-/T]GGGCTGAAACGTACC	2976
rs36036730	snp	A/G	0.0295035	0.117819	intron-variant	GTF3C2	GRCh38.p7	2:27354198	TGAGGCAGGAGGATC[A/G]CCTGAGCCCAGGAGT	2976
rs36040548	in-del	-/T			intron-variant	GTF3C2	GRCh38.p7	2:27349165	TTTTTTTTTTTTTTT[-/T]GAGACAGAGTCTTGC	2976
rs41288825	snp	A/G	0.000153988	0.00877328	missense	GTF3C2	GRCh38.p7	2:27328514	ATTGGATTCAGTGCC[A/G]TATCTGGTAATATAG	2976
rs55795546	snp	A/G	0.131723	0.220251	upstream-variant-2KB, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27358116	CATCTAAATTACTTC[A/G]AATGTGTAACTATAT	2976
rs55829917	snp	G/T			intron-variant	GTF3C2	GRCh38.p7	2:27345815	GCCTCCCAGGTTCAA[G/T]CAATTCTCCTGCCTC	2976
rs56055574	in-del	-/GTTT			upstream-variant-2KB, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27358248	TTTGTTTGTTTGTTT[-/GTTT]TGAGACAGGGTCTTG	2976
rs56123847	snp	C/T			intron-variant	GTF3C2	GRCh38.p7	2:27346615	TGGACTCAAGCAATT[C/T]TCTCAACTTCGTCTC	2976
rs56166164	in-del	-/A	0.429538	0.173972	intron-variant	GTF3C2	GRCh38.p7	2:27345120	AGACTCCTTTGCTAC[-/A]AAAAAAACATGGTGG	2976
rs56981543	snp	C/T			intron-variant	GTF3C2	GRCh38.p7	2:27346617	GACTCAAGCAATTCT[C/T]TCAACTTCGTCTCCC	2976
rs57039562	snp	A/T	0.0260105	0.111035	intron-variant	GTF3C2	GRCh38.p7	2:27351491	ACAAGCCCCTACCAC[A/T]GCCAATGGCTCCATA	2976
rs58075388	in-del	-/A			intron-variant	GTF3C2	GRCh38.p7	2:27340007	AAAAAAAAAAAAAAA[-/A]GGGAAAAAAGAAAGT	2976
rs59808999	snp	C/T	0.000798403	0.0199641	upstream-variant-2KB, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27358599	TCTGCTTAATTTTGA[C/T]GATTAAGTAGTATGT	2976
rs62130716	snp	C/T	0.00159617	0.0282053	downstream-variant-500B	GTF3C2	GRCh38.p7	2:27325651	CACTGGGGTGTGTCC[C/T]TGCTTAGGAGGCAGT	2976
rs62130717	snp	C/T	0.5	0	intron-variant	GTF3C2	GRCh38.p7	2:27328992	ATTTCTTCTTCTTAA[C/T]CTCTTCCAGAATTTA	2976
rs62130718	snp	A/G	0.000399281	0.0141238	intron-variant	GTF3C2	GRCh38.p7	2:27331810	CAGGCATTGTGGCTC[A/G]TTCCTGTAGTCCCAA	2976
rs62130719	snp	A/C/T	0.000399281	0.0141238	intron-variant	GTF3C2	GRCh38.p7	2:27340786	CCACCACATCCAGCT[A/C/T]ATTTTTTTTTTTTTT	2976
rs62130720	snp	A/G	0.02016	0.0983543	upstream-variant-2KB, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27358383	TTGGGGTGTGTGGCA[A/G]GTGTATACCACCACT	2976
rs66505571	snp	A/G	0.00914312	0.0669923	intron-variant	GTF3C2	GRCh38.p7	2:27329651	TATGAAAGGATGTGG[A/G]GATCCTGATTAGCTA	2976
rs66712662	snp	G/T	0.129664	0.219133	intron-variant	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27336970	TGGCATACTATAGTA[G/T]TCTCCCTAAGGCTAG	2976
rs67035659	in-del	-/T	0.375	0.216506	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27334660	ATTTTTTTTTTTTTT[-/T]CAGACAGCATCTCAC	2976
rs67585081	snp	C/T	0.00716266	0.059414	intron-variant	GTF3C2	GRCh38.p7	2:27344655	ATGTTAACATCTCTT[C/T]CTGTAAAGATTAGTC	2976
rs68152356	snp	C/T	0.000399281	0.0141238	intron-variant	GTF3C2	GRCh38.p7	2:27338416	ATTCCCCAGAGTTCC[C/T]GTCGTCTTCTCGCCC	2976
rs70953853	in-del	-/TTTT	0	0	intron-variant	GTF3C2	GRCh38.p7	2:27346035	TTTTTTTTTTTTTTT[-/TTTT]GAGACACGCTCTTGT	2976
rs71441066	snp	A/G	0.5	0	intron-variant	GTF3C2	GRCh38.p7	2:27327011	GGACAGGACCATGAG[A/G]GGTGACAGAGGTAAG	2976
rs71441067	snp	A/C	0.5	0	intron-variant	GTF3C2	GRCh38.p7	2:27346374	TTTTTTTTTTTGAGA[A/C]AGAGTCTCATTCTGT	2976
rs71441068	snp	A/G	0.5	0	intron-variant	GTF3C2	GRCh38.p7	2:27346376	TTTTTTTTTGAGACA[A/G]AGTCTCATTCTGTAA	2976
rs71818442	in-del	-/CACGCGCACGCGCGCACA			intron-variant	GTF3C2	GRCh38.p7	2:27338447	CTCTACACAGGCGCG[-/CACGCGCACGCGCGCACA]CACACACACACACAC	2976
rs72660247	snp	A/G	0.0821764	0.185298	intron-variant	GTF3C2	GRCh38.p7	2:27345594	TGAGACTCTGTCTTT[A/G]AAAAAAAGAATGAGT	2976
rs72817551	snp	G/T	0.00676609	0.0577691	upstream-variant-2KB, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27357891	GCCTCCCATAGTGCT[G/T]CGATCACAGGTGTAA	2976
rs73921512	snp	A/G	0.10237	0.201756	intron-variant	GTF3C2	GRCh38.p7	2:27351559	CTAAATAGGAGAGCC[A/G]CTTCTCTAGCTCCTG	2976
rs73921513	snp	C/G	0.0185938	0.0946107	intron-variant, upstream-variant-2KB	GTF3C2, LOC105374363	GRCh38.p7	2:27355650	CCTTCCATTGCACCC[C/G]AATCTGTCTGGTTCC	2976
rs73921514	snp	C/T	0.0887219	0.191022	intron-variant, utr-variant-5-prime, synonymous-codon, nc-transcript-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27356305	CACAGCTGAAAGAGA[C/T]TGACCCACAACCACT	2976
rs73921515	snp	A/G	0.02016	0.0983543	upstream-variant-2KB, intron-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27357166	GACTGCCGCGCCTGT[A/G]GCCGGAAGAGCCAGC	2976
rs74372996	snp	A/G	0.0130921	0.0798413	intron-variant	GTF3C2	GRCh38.p7	2:27341858	TCTATTATAGTTACC[A/G]GGTCAAAGCTGTCCT	2976
rs74532320	in-del	-/AA			intron-variant	GTF3C2	GRCh38.p7	2:27348285	GAAAAAAAAAAAAAA[-/AA]CTAGCTGGGCATGGT	2976
rs74614122	snp	A/C	0.000798403	0.0199641	intron-variant	GTF3C2	GRCh38.p7	2:27353833	CCCAAGTGCTCCTCC[A/C]CATCTCAGCCTCTCA	2976
rs74632960	snp	A/G	0.5	0	intron-variant	GTF3C2	GRCh38.p7	2:27351813	CTACCTCAGGGTTCA[A/G]AGTGGGATCAGTCCC	2976
rs74772112	snp	C/G	0.0314385	0.121371	upstream-variant-2KB, intron-variant	GTF3C2, LOC105374363	GRCh38.p7	2:27357087	GCCTCGACGGGAGCC[C/G]GGAGTAGGCGGACTC	2976
rs74979511	snp	G/T	0.0584853	0.160693	intron-variant	GTF3C2	GRCh38.p7	2:27332223	GGGGTTTCACCATGT[G/T]GCCCAGTCTCCAACT	2976
rs75206051	snp	A/C/G	0.000399281	0.0141238	intron-variant, upstream-variant-2KB	GTF3C2, GTF3C2-AS1	GRCh38.p7	2:27334830	AAAATTTTTTTGTCG[A/C/G]GACGACATCTCATTA	2976
rs75302569	snp	C/T	0.0505692	0.150756	intron-variant	GTF3C2	GRCh38.p7	2:27327004	TCTGAAAGGACAGGA[C/T]CATGAGGGGTGACAG	2976
rs75334779	snp	C/T	0.0189856	0.0955633	intron-variant	GTF3C2	GRCh38.p7	2:27327945	CTCCTTAGTTTTACA[C/T]CTTTGTGCTGAACTC	2976

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