SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs759352 | snp | A/C/G | 0.0310518 | 0.120672 | intron-variant | FANCL | GRCh38.p7 | 2:58187981 | CAGATATTTCTTAGT[A/C/G]TAACACCAAATGCAA | 55120 |
rs768298 | snp | A/G | 0.497776 | 0.0332724 | intron-variant | FANCL | GRCh38.p7 | 2:58183837 | ATCAGAGAAGCCAAC[A/G]TAGTCCTGTACATGG | 55120 |
rs848278 | snp | C/T | 0.365853 | 0.221536 | intron-variant | FANCL | GRCh38.p7 | 2:58193750 | CCCCTAGTTTTTCAC[C/T]GTAATAATCCTGTGG | 55120 |
rs848279 | snp | G/T | 0.376592 | 0.215579 | intron-variant | FANCL | GRCh38.p7 | 2:58192514 | tgtaatgtggttaac[G/T]gtgattaattttcct | 55120 |
rs848280 | snp | A/G | 0.373397 | 0.217424 | intron-variant | FANCL | GRCh38.p7 | 2:58185337 | GATCTTTTCATGGAC[A/G]AGCCCGTATACGGAA | 55120 |
rs848281 | snp | A/T | 0.381308 | 0.21274 | intron-variant | FANCL | GRCh38.p7 | 2:58181934 | ATAGATTTGAAGATT[A/T]ATTTTAAAAGGCCAG | 55120 |
rs848282 | snp | A/G | 0.38286 | 0.211774 | intron-variant | FANCL | GRCh38.p7 | 2:58181552 | TCAAAATATGTCATC[A/G]GCATGCATACATTTA | 55120 |
rs848283 | snp | A/G | 0.0123036 | 0.0774623 | intron-variant | FANCL | GRCh38.p7 | 2:58180612 | tgcacccatcaaccc[A/G]acatctacattaggt | 55120 |
rs848284 | snp | A/T | 0.379158 | 0.214052 | intron-variant | FANCL | GRCh38.p7 | 2:58211905 | ctagagactagttgc[A/T]tggctttgcccaaaa | 55120 |
rs848285 | snp | A/C | 0.405082 | 0.196086 | intron-variant | FANCL | GRCh38.p7 | 2:58168146 | ttgccagccaccAAG[A/C]ATGTTAGCtattttt | 55120 |
rs848286 | snp | A/G | 0.455502 | 0.142369 | intron-variant | FANCL | GRCh38.p7 | 2:58167408 | GACAGAGAAAGGAGA[A/G]ACAGAGATATACTAT | 55120 |
rs848287 | snp | A/G | 0.378174 | 0.214642 | intron-variant | FANCL | GRCh38.p7 | 2:58166776 | CATGTTTAAGGAAGT[A/G]GCTAGTTTCTTTTCA | 55120 |
rs848288 | snp | A/G | 0.400325 | 0.199756 | intron-variant | FANCL | GRCh38.p7 | 2:58165654 | AAAATAAATCTAACA[A/G]TGACAGTTGGACTCA | 55120 |
rs848289 | snp | A/T | 0.402982 | 0.197728 | intron-variant, downstream-variant-500B | FANCL, VRK2 | GRCh38.p7 | 2:58164435 | GTTCATAGTAAATAA[A/T]GTGTTACCAAATGAG | 55120 |
rs848290 | snp | A/T | 0.0836354 | 0.186609 | intron-variant, downstream-variant-500B, utr-variant-3-prime | FANCL, VRK2 | GRCh38.p7 | 2:58162047 | TTTTTGGCTGGCAAG[A/T]TGTTTGGGCATCAGT | 55120 |
rs848291 | snp | C/T | 0.455798 | 0.14194 | synonymous-codon, utr-variant-3-prime, downstream-variant-500B, nc-transcript-variant | FANCL, VRK2 | GRCh38.p7 | 2:58161561 | AGTGTGTGATAATTC[C/T]CAGTGTGGACAACCT | 55120 |
rs1011314 | snp | A/G | 0.499722 | 0.0117779 | intron-variant | FANCL | GRCh38.p7 | 2:58195857 | ctttggggttacgca[A/G]tattgacaaattgcc | 55120 |
rs1100188 | snp | G/T | 0.378568 | 0.214407 | intron-variant | FANCL | GRCh38.p7 | 2:58188980 | cttttttccttggca[G/T]aattacttggagatt | 55120 |
rs1100189 | snp | C/G | 0.383632 | 0.211288 | intron-variant | FANCL | GRCh38.p7 | 2:58175346 | atcaaggatattggt[C/G]taaaattctcttttt | 55120 |
rs1100190 | snp | C/G | 0.380333 | 0.213338 | intron-variant | FANCL | GRCh38.p7 | 2:58172770 | ctgtccagctttgtt[C/G]cattgctggtgagga | 55120 |
rs1100191 | snp | C/T | 0.376989 | 0.215346 | intron-variant | FANCL | GRCh38.p7 | 2:58169085 | agcagagctcgagtg[C/T]tgtggtgggagatct | 55120 |
rs1404457 | snp | A/T | 0.192715 | 0.243348 | intron-variant | FANCL | GRCh38.p7 | 2:58205749 | CCAGCTGTTTCTGCC[A/T]GGAGTCCTTGTTCTC | 55120 |
rs1404458 | snp | G/T | 0.0271762 | 0.113356 | intron-variant | FANCL | GRCh38.p7 | 2:58204465 | CACTGACCACAGCAT[G/T]AGCCTTGACACACAT | 55120 |
rs1404459 | snp | C/G | 0.220304 | 0.24823 | intron-variant | FANCL | GRCh38.p7 | 2:58204275 | ATCTCCAGTTCCCCT[C/G]TCCAGCTCTCCCCGG | 55120 |
rs1404460 | snp | A/G | 0.291235 | 0.246576 | intron-variant | FANCL | GRCh38.p7 | 2:58204033 | TGCTAGTTACATCTA[A/G]AAATACATATATCAT | 55120 |
rs1404461 | snp | A/C | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58202067 | CCTGCGATTGTCAGT[A/C]AACTACACTAATAGT | 55120 |
rs1524856 | snp | A/G | 0.0205511 | 0.0992634 | intron-variant | FANCL | GRCh38.p7 | 2:58213270 | ACTGTTTAAGGCCCC[A/G]CCTGAGGAGCTGGCT | 55120 |
rs1830016 | snp | C/T | | | intron-variant | FANCL | GRCh38.p7 | 2:58202369 | AAAAAAAAGTTAGTT[C/T]TAGATTGTGAATTTG | 55120 |
rs2098344 | snp | A/G | 0.494315 | 0.0530107 | intron-variant | FANCL | GRCh38.p7 | 2:58186616 | AGTGGCATGGAAGCC[A/G]GAAAAAAATGCTCTT | 55120 |
rs2110664 | snp | G/T | 0.494936 | 0.050064 | intron-variant | FANCL | GRCh38.p7 | 2:58235596 | ctagacataatgaat[G/T]ctacctgttgcatgc | 55120 |
rs2192690 | snp | G/T | 0.318415 | 0.240457 | upstream-variant-2KB | FANCL | GRCh38.p7 | 2:58243207 | TCCATGGGGGAAAGT[G/T]TGGTGGTGGGGAAGT | 55120 |
rs2691672 | snp | C/T | 0.379158 | 0.214052 | intron-variant | FANCL | GRCh38.p7 | 2:58178125 | gtgaatctgtgtggt[C/T]ctgggctttttttgg | 55120 |
rs3217126 | in-del | -/TTAT | | | intron-variant | FANCL | GRCh38.p7 | 2:58204344 | CAGAAATTGCTCTGA[-/TTAT]TTTTTATAATGGATT | 55120 |
rs3732136 | snp | C/T | 0.493881 | 0.054972 | intron-variant, utr-variant-3-prime | FANCL, VRK2 | GRCh38.p7 | 2:58159865 | TAAAATTGCTTTGTA[C/T]TAGAAATAGTGTCAT | 55120 |
rs3732137 | snp | C/G | 0.00159617 | 0.0282053 | intron-variant, utr-variant-3-prime | FANCL, VRK2 | GRCh38.p7 | 2:58159874 | TTTGTACTAGAAATA[C/G]TGTCATAGAATAGTG | 55120 |
rs3755296 | snp | A/G | 0.193653 | 0.243567 | intron-variant | FANCL | GRCh38.p7 | 2:58185833 | TGACTAGGGAATATA[A/G]TTTTAGTCAAGGAGT | 55120 |
rs3755297 | snp | C/G | 0.00398564 | 0.0444627 | intron-variant | FANCL | GRCh38.p7 | 2:58194957 | ATAAAGATCTTCCAA[C/G]TTTAAAGTCCAGAAA | 55120 |
rs3771216 | snp | C/T | 0.499977 | 0.00339449 | intron-variant | FANCL | GRCh38.p7 | 2:58184705 | CAATAAACTGTCTTA[C/T]AGGAAGAAAAGTATC | 55120 |
rs3771218 | snp | C/T | 0.0689305 | 0.172377 | intron-variant | FANCL | GRCh38.p7 | 2:58197125 | TTTTGCTATGTTTTC[C/T]CAACTTCCATTGTGG | 55120 |
rs3771219 | snp | A/G | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58215166 | ATCTATACCTAAAGA[A/G]TGACTAGGTCCATGA | 55120 |
rs3771220 | snp | C/T | 0.425432 | 0.178112 | intron-variant | FANCL | GRCh38.p7 | 2:58223434 | ATTAATTATTGCTAT[C/T]CACAAAAATTGAAGG | 55120 |
rs3771221 | snp | A/T | 0.379158 | 0.214052 | intron-variant | FANCL | GRCh38.p7 | 2:58224098 | ATTGTAAATCAGAGA[A/T]CTCAAAATTTTATTT | 55120 |
rs3771222 | snp | C/T | 0.19334 | 0.243495 | intron-variant | FANCL | GRCh38.p7 | 2:58229142 | ATCATAGATAATAAC[C/T]TGCCTTTAAGACACA | 55120 |
rs3771223 | snp | C/T | | | intron-variant | FANCL | GRCh38.p7 | 2:58231890 | ACAGGTAAATATTTA[C/T]AAATGCTGCATTGGT | 55120 |
rs3771224 | snp | C/T | 0.377582 | 0.214995 | intron-variant | FANCL | GRCh38.p7 | 2:58232894 | AATCTTTTACTCTAA[C/T]AGAATAAAATGAAAA | 55120 |
rs3771225 | snp | C/G | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58233883 | AAAGATAGGTAGAGA[C/G]ACCTTTTGGAAACTG | 55120 |
rs3821210 | snp | C/T | | | intron-variant | FANCL | GRCh38.p7 | 2:58198050 | gtgtgtgtgtgcgtg[C/T]gtgtgtgtgtatata | 55120 |
rs3821211 | snp | A/T | 0.0729998 | 0.176553 | intron-variant | FANCL | GRCh38.p7 | 2:58204574 | ATTAAACTTCCTGTC[A/T]AACTCTTTGATCCAT | 55120 |
rs3821212 | snp | A/T | 0.409041 | 0.192888 | intron-variant | FANCL | GRCh38.p7 | 2:58216463 | AGGTACACTAACTAG[A/T]ATGCCTCCAAATTAA | 55120 |
rs3821213 | snp | C/T | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58222658 | TAAAATGTTTATGTT[C/T]TCCCAACCAAAACTA | 55120 |
rs3834164 | in-del | -/A | 0.375 | 0.216506 | intron-variant | FANCL | GRCh38.p7 | 2:58194927 | TGTCTATTATATCAC[-/A]AAAAAAAAAAGAAAA | 55120 |
rs3836117 | in-del | -/TAC | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58166166 | AATAGTAATGAGTAC[-/TAC]AAGATGTATGTACAC | 55120 |
rs3836118 | in-del | -/A | | | intron-variant | FANCL | GRCh38.p7 | 2:58194130 | TCCATGATAAAAAAA[-/A]TATAAAGACCACTAT | 55120 |
rs3836119 | in-del | -/GTAAAA | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58205364 | TCTTAGAAAACAAAA[-/GTAAAA]CTATTCTAGAAAGTG | 55120 |
rs3836120 | in-del | -/T | 0.259618 | 0.249815 | intron-variant | FANCL | GRCh38.p7 | 2:58223008 | TTAAGTATATATCAA[-/T]TTTTTTTAACCAGGA | 55120 |
rs3836121 | in-del | -/C | | | intron-variant | FANCL | GRCh38.p7 | 2:58223019 | CAATTTTTTTTAACC[-/C]AGGATAGGACACTAT | 55120 |
rs3836122 | in-del | -/C | 0.490453 | 0.0684267 | intron-variant | FANCL | GRCh38.p7 | 2:58233253 | AGAAGAACTATTCTA[-/C]TATAGAAATCTGTGC | 55120 |
rs4395240 | snp | C/G | 0.307176 | 0.243374 | upstream-variant-2KB | FANCL | GRCh38.p7 | 2:58242365 | TGATCCTAGAACCTA[C/G]CAACAGCATCACCTG | 55120 |
rs4672231 | snp | A/G | 0.382666 | 0.211895 | intron-variant | FANCL | GRCh38.p7 | 2:58175134 | ctctgaaattgtggc[A/G]aaaatcaatagctta | 55120 |
rs4672232 | snp | A/T | 0.382666 | 0.211895 | intron-variant | FANCL | GRCh38.p7 | 2:58175136 | ctgaaattgtggcga[A/T]aatcaatagcttacc | 55120 |
rs5831491 | in-del | -/AA | | | intron-variant | FANCL | GRCh38.p7 | 2:58202250 | AAAAAAAAAAAAAAA[-/AA]GACTTCCTGGTTTTC | 55120 |
rs6709203 | snp | A/G | 0.0471551 | 0.14613 | intron-variant | FANCL | GRCh38.p7 | 2:58194524 | AAAGCAAATATCTAG[A/G]AAGAGGTGCTTAGAC | 55120 |
rs6709460 | snp | C/G | 0.377187 | 0.215229 | intron-variant | FANCL | GRCh38.p7 | 2:58217475 | GGAAGAATTTCAATA[C/G]AGCATTAAAATCTGT | 55120 |
rs6709533 | snp | A/T | 0.290718 | 0.246662 | intron-variant | FANCL | GRCh38.p7 | 2:58208408 | TATAAGTTAAATTTT[A/T]TAAACATTTAAAATG | 55120 |
rs6717332 | snp | G/T | 0.0667028 | 0.170006 | intron-variant | FANCL | GRCh38.p7 | 2:58218945 | agtataaacacattt[G/T]ttttccatttttcag | 55120 |
rs6721991 | snp | C/T | 0.0554779 | 0.157039 | intron-variant | FANCL | GRCh38.p7 | 2:58220673 | TATGTTCCTTGTTCT[C/T]TTTTAAATGGCGATT | 55120 |
rs6724359 | snp | C/T | | | intron-variant | FANCL | GRCh38.p7 | 2:58217201 | atatatatatatata[C/T]atatatatatatata | 55120 |
rs6725148 | snp | C/T | 0.3742 | 0.216966 | intron-variant | FANCL | GRCh38.p7 | 2:58220950 | gggcgtggtggctca[C/T]gcctgtaatcccagc | 55120 |
rs6729598 | snp | A/G | 0.0659589 | 0.169201 | intron-variant | FANCL | GRCh38.p7 | 2:58167860 | TTCAACGAACTTAGG[A/G]GGTAGACATCAAAAC | 55120 |
rs6732503 | snp | A/C | 0.0482946 | 0.147699 | intron-variant | FANCL | GRCh38.p7 | 2:58235590 | tatctagcatgcaac[A/C]ggtagcattcattat | 55120 |
rs6732505 | snp | C/G | 0.394997 | 0.203657 | intron-variant | FANCL | GRCh38.p7 | 2:58228123 | ATAATTGTGATTTTT[C/G]TCCTCTCACAACTAA | 55120 |
rs6735296 | snp | A/T | 0.307423 | 0.243316 | upstream-variant-2KB | FANCL | GRCh38.p7 | 2:58241625 | TGTTTTACTTTATTG[A/T]AAGACTGTTACAACT | 55120 |
rs6740373 | snp | C/T | 0.11963 | 0.213316 | intron-variant | FANCL | GRCh38.p7 | 2:58230229 | ATATAATGTATCAAA[C/T]ATGTATTTGAAAAAG | 55120 |
rs6740836 | snp | C/G | 0.11963 | 0.213316 | intron-variant | FANCL | GRCh38.p7 | 2:58230570 | TACTATTAAGTAACT[C/G]TTCTAAGGAATTACT | 55120 |
rs6741122 | snp | G/T | 0.0626037 | 0.165477 | intron-variant | FANCL | GRCh38.p7 | 2:58191558 | TGGTGAGATTGACCA[G/T]GATTTTTCATTAATC | 55120 |
rs6742445 | snp | A/T | 0.12932 | 0.218944 | intron-variant | FANCL | GRCh38.p7 | 2:58218738 | ctgaacaattaagta[A/T]atggataacagataa | 55120 |
rs6747314 | snp | A/T | 0.11963 | 0.213316 | intron-variant | FANCL | GRCh38.p7 | 2:58167985 | CCAAATTGAAAAAAA[A/T]AAATTATTTCTAAAT | 55120 |
rs6748725 | snp | C/T | | | intron-variant | FANCL | GRCh38.p7 | 2:58232442 | ATTTCAGTGTTATTT[C/T]TTAGTAAATAAATTT | 55120 |
rs6752935 | snp | A/G | 0.275732 | 0.248672 | intron-variant | FANCL | GRCh38.p7 | 2:58173181 | gtacctgaaagtgac[A/G]aggacaatggaacca | 55120 |
rs6761301 | snp | A/C | 0.499961 | 0.0043928 | intron-variant | FANCL | GRCh38.p7 | 2:58228537 | GGCATGTAGCCATAC[A/C]CATTCACTTACCTCT | 55120 |
rs7340157 | snp | C/T | 0.353154 | 0.227726 | intron-variant | FANCL | GRCh38.p7 | 2:58176490 | gcatatctacaacta[C/T]ctgatcgttgacaaa | 55120 |
rs7340170 | snp | C/T | 0.126909 | 0.217598 | intron-variant | FANCL | GRCh38.p7 | 2:58178232 | ctccctaactcattt[C/T]atgaggcctgcatca | 55120 |
rs7558066 | snp | C/T | 0.306927 | 0.243432 | intron-variant | FANCL | GRCh38.p7 | 2:58181108 | ttaccggaatgctca[C/T]agcagctacattcat | 55120 |
rs7561771 | snp | A/T | 0.318174 | 0.240525 | intron-variant | FANCL | GRCh38.p7 | 2:58233129 | GTAACAATAATTCAC[A/T]GTTTCATTAAAGCAC | 55120 |
rs7577402 | snp | A/G | 0.0803491 | 0.183626 | intron-variant | FANCL | GRCh38.p7 | 2:58209518 | CTATTATGTTTTACA[A/G]AAAATTATCATTATT | 55120 |
rs7578766 | snp | A/T | 0.00438332 | 0.0466095 | intron-variant, downstream-variant-500B | FANCL | GRCh38.p7 | 2:58188286 | tatgaaaataccata[A/T]tatcctgaaaaaagt | 55120 |
rs7580070 | snp | A/C | 0.0479149 | 0.147179 | intron-variant, utr-variant-3-prime | FANCL, VRK2 | GRCh38.p7 | 2:58162522 | taaccaaatgcagat[A/C]aaaaatacagtactg | 55120 |
rs7581091 | snp | A/G | 0.00438332 | 0.0466095 | intron-variant | FANCL | GRCh38.p7 | 2:58240533 | aactagaaaatggga[A/G]tgatgattcttttaa | 55120 |
rs7594702 | snp | C/G | 0.415891 | 0.18703 | intron-variant | FANCL | GRCh38.p7 | 2:58226485 | TTTCTTCACCACCTG[C/G]CCAACACTAGTGTCA | 55120 |
rs7597069 | snp | C/T | 0.120326 | 0.21374 | intron-variant | FANCL | GRCh38.p7 | 2:58193030 | AAATTTTAAAATACT[C/T]AAGAAAAAATTCAAC | 55120 |
rs7599987 | snp | G/T | 0.0704125 | 0.17392 | intron-variant | FANCL | GRCh38.p7 | 2:58238262 | gaagccaaaagattg[G/T]acacccTGTTTTAGA | 55120 |
rs7603404 | snp | G/T | 0.00953873 | 0.0683987 | intron-variant | FANCL | GRCh38.p7 | 2:58230092 | AATCAGTAAATGACA[G/T]GCAAACAGTACATCT | 55120 |
rs9309303 | snp | A/C | 0.108524 | 0.206118 | intron-variant | FANCL | GRCh38.p7 | 2:58164812 | GTTCCAAATTAAACA[A/C]AGTTAGACTTTTTGA | 55120 |
rs9677908 | snp | C/T | 0.106987 | 0.205054 | intron-variant | FANCL | GRCh38.p7 | 2:58173506 | taaagaaaagaattt[C/T]caacccagaatttca | 55120 |
rs9678508 | snp | A/T | 0.103082 | 0.202275 | intron-variant | FANCL | GRCh38.p7 | 2:58173254 | ccaatctagcaaggc[A/T]ggccaacattcagat | 55120 |
rs10178325 | snp | A/G | 0.113685 | 0.209567 | intron-variant | FANCL | GRCh38.p7 | 2:58187220 | cacatatacaccatg[A/G]aatactatgcagcca | 55120 |
rs10179025 | snp | A/C | 0.039522 | 0.134904 | intron-variant | FANCL | GRCh38.p7 | 2:58212204 | caaagaggagcaagt[A/C]ccatcttacatggat | 55120 |
rs10184957 | snp | G/T | 0.435694 | 0.167385 | downstream-variant-500B, intron-variant | FANCL, VRK2 | GRCh38.p7 | 2:58159112 | AAGAGATGGCCTACT[G/T]ACGTGGTTTAAAAGA | 55120 |
rs10185190 | snp | A/C | 0 | 0 | intron-variant | FANCL | GRCh38.p7 | 2:58189548 | AGATATATGTGAGAA[A/C]TAAGATGTTAGCTAT | 55120 |
rs10185542 | snp | C/T | 0.0379877 | 0.132479 | intron-variant | FANCL | GRCh38.p7 | 2:58184000 | CAACTTCTAAGGTAA[C/T]TTCTAAGGTGACTTC | 55120 |