SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs584298 | snp | A/G | 0.45574 | 0.142025 | intron-variant | TRIM62 | GRCh38.p7 | 1:33171056 | CCAGAGCAGGAAGAG[A/G]CTGCAGGGACCATCT | 55223 |
rs587042 | snp | C/T | 0.0554779 | 0.157039 | intron-variant | TRIM62 | GRCh38.p7 | 1:33173135 | ATCTATACCTAGAAC[C/T]GGATGCTCCTGGTCC | 55223 |
rs587910 | snp | A/G | 0.375996 | 0.215928 | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33177760 | atggccctgcacaac[A/G]gttatctagccccaa | 55223 |
rs591359 | snp | A/G | 0.0228947 | 0.104514 | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33183626 | cctcttgccagtgac[A/G]gtttgggCAGGTCCA | 55223 |
rs591664 | snp | C/T | 0.0463947 | 0.145069 | intron-variant, utr-variant-3-prime | TRIM62 | GRCh38.p7 | 1:33163640 | CCTAGGGCCTGGAGG[C/T]GCTGGGGCCCTTTCA | 55223 |
rs595067 | snp | A/C | 0.0310518 | 0.120672 | intron-variant | TRIM62 | GRCh38.p7 | 1:33179198 | AGCAGCAGCGCCTAA[A/C]ACGATGGCTCTGGGG | 55223 |
rs597066 | snp | G/T | 0.0554779 | 0.157039 | intron-variant | TRIM62 | GRCh38.p7 | 1:33171632 | TTTGCAGTTAGTCGA[G/T]GAGGAAGAAACTTGA | 55223 |
rs599167 | snp | A/T | 0.402277 | 0.198272 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33149064 | CACCCCCAGAGGCTC[A/T]ATTCAAAAGGCCCAC | 55223 |
rs603186 | snp | A/G | 0.317451 | 0.240729 | upstream-variant-2KB, intron-variant, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33176711 | GGTAGCTCAGGGACG[A/G]TATGTGGCCTAGTCA | 55223 |
rs604941 | snp | A/G | 0.031825 | 0.122064 | intron-variant | TRIM62 | GRCh38.p7 | 1:33176331 | AGAAACCAGAGCCGA[A/G]ATTTGAACCTAGCCC | 55223 |
rs607008 | snp | A/G | 0.438386 | 0.164349 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33160683 | GTGCTGGGATTACAG[A/G]CGTGAGCCATCGTGC | 55223 |
rs607997 | snp | A/G | 0.0193772 | 0.0965046 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33154259 | GGCAAAAGTGCATCC[A/G]AGGCTCCGATTCCCT | 55223 |
rs621539 | snp | C/T | 0.449599 | 0.150533 | intron-variant, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33161648 | TGGCCTTCCTGAGCC[C/T]CCTCACCCGGGGAGG | 55223 |
rs622407 | snp | A/G | 0.349127 | 0.229508 | synonymous-codon | TRIM62 | GRCh38.p7 | 1:33181349 | GCGGCGGCAGAAGTA[A/G]TGCTCGCAGCCCAGG | 55223 |
rs623596 | snp | A/G | 0.362104 | 0.223456 | intron-variant | TRIM62 | GRCh38.p7 | 1:33166160 | cactcactgtcttcc[A/G]tcacccccagatggg | 55223 |
rs628184 | snp | A/C | 0.0240643 | 0.107019 | intron-variant | TRIM62 | GRCh38.p7 | 1:33172559 | GGAGCGGGGGTGGGC[A/C]GGGCAGGATGAGGTG | 55223 |
rs631646 | snp | C/G | 0.433818 | 0.169443 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33153038 | GCTGGGGGTGGGATA[C/G]AGGGGTGGGAGGTGG | 55223 |
rs632612 | snp | C/T | 0.0562307 | 0.157967 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168458 | aagtggatttcaagc[C/T]atcagtgtgaagtag | 55223 |
rs634307 | snp | C/T | 0.31721 | 0.240796 | intron-variant | TRIM62 | GRCh38.p7 | 1:33180896 | GATAGGGCCCTGACC[C/T]TGCTGGCGGCCCCGC | 55223 |
rs635614 | snp | C/T | 0.375 | 0.216506 | intron-variant | TRIM62 | GRCh38.p7 | 1:33169138 | CTAAACGTGATGCCA[C/T]GAGGTGTGCATGTGT | 55223 |
rs635677 | snp | A/G | 0.367297 | 0.220775 | intron-variant | TRIM62 | GRCh38.p7 | 1:33180544 | ATGCACATCTGATCC[A/G]GTCTCCGCCCCCACA | 55223 |
rs636561 | snp | C/T | 0.376394 | 0.215696 | intron-variant | TRIM62 | GRCh38.p7 | 1:33180370 | TTGTTGTAGAGTATC[C/T]GGACCTGATCTCAGT | 55223 |
rs639420 | snp | C/G | 0 | 0 | upstream-variant-2KB, missense, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33182207 | CCCAGGGAAGCGAAG[C/G]CCAGCTGTTCCTTCG | 55223 |
rs641657 | snp | A/C | 0.402277 | 0.198272 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33149199 | gctttatcccccagg[A/C]gggaatgcagtggca | 55223 |
rs643402 | snp | C/T | 0.375797 | 0.216044 | upstream-variant-2KB, intron-variant, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33176551 | GTTAGGAACCTGAGA[C/T]GGCCAGAGAGCCGGA | 55223 |
rs644284 | snp | A/C/G | 0.00119737 | 0.0244387 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33149792 | tgccctgatactggc[A/C/G]tggggtattatcttc | 55223 |
rs645594 | snp | G/T | 0.00636936 | 0.0560724 | intron-variant | TRIM62 | GRCh38.p7 | 1:33174231 | tgcccaggctggctg[G/T]agtgcagtggcacca | 55223 |
rs645998 | snp | A/C | 0.375797 | 0.216044 | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33177090 | acacatgcatgcaca[A/C]atgcacacacatgca | 55223 |
rs646065 | snp | C/T | 0.441705 | 0.160466 | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33177136 | acgcatgcacacaca[C/T]gcacatgcacaccca | 55223 |
rs646417 | snp | G/T | 0.0244538 | 0.107838 | intron-variant | TRIM62 | GRCh38.p7 | 1:33169260 | cccatctcagtgaag[G/T]gcacccctcccctaa | 55223 |
rs652332 | snp | C/T | 0.0341408 | 0.126114 | intron-variant | TRIM62 | GRCh38.p7 | 1:33179197 | CCCAGAGCCATCGTT[C/T]TAGGCGCTGCTGCTG | 55223 |
rs654336 | snp | C/T | 0.439363 | 0.163222 | intron-variant, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33161823 | CTCGCCACCCTCTCC[C/T]AGTTGAAAGTTCTGC | 55223 |
rs655747 | snp | A/G | 0.0858192 | 0.188533 | intron-variant, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33162197 | ttagctccttgacac[A/G]tagtaaaatgctgaa | 55223 |
rs657459 | snp | A/C | 0 | 0 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162541 | CTGTGCCCATCCCAG[A/C]GCCTGGTACAAGGCT | 55223 |
rs659297 | snp | C/T | 0.0486741 | 0.148216 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33150864 | ACTCAGGTGTGACAG[C/T]GGAGGGGCAGAAGAG | 55223 |
rs673894 | snp | C/T | 0.18134 | 0.240387 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33151809 | CCAGGAGATGTTTCC[C/T]GGCCACCACTGAGCA | 55223 |
rs674700 | snp | A/G | 0.0193772 | 0.0965046 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33156142 | tgggctgcagtcaag[A/G]ctgtcactcctgcaa | 55223 |
rs676069 | snp | C/T | 0.0482946 | 0.147699 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33156476 | actctctcctggaaa[C/T]gcttcctccaggctt | 55223 |
rs677834 | snp | A/G | 0.0562307 | 0.157967 | intron-variant | TRIM62 | GRCh38.p7 | 1:33170187 | atacaaaaattagcc[A/G]ggcatggtggtggat | 55223 |
rs679602 | snp | A/C | 0.375996 | 0.215928 | intron-variant, upstream-variant-2KB | TRIM62 | GRCh38.p7 | 1:33179043 | TTGCCCAAGGCCACA[A/C]TTCCAGACAGTGAGA | 55223 |
rs680960 | snp | C/T | 0.375797 | 0.216044 | intron-variant, upstream-variant-2KB | TRIM62 | GRCh38.p7 | 1:33178751 | TCTCTAGTGCACTGT[C/T]GTGGGGTTGGACATA | 55223 |
rs685235 | snp | A/G | 0.432063 | 0.171327 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162740 | TGGAACATCAGAGTG[A/G]CAGCCACCCCTGGAG | 55223 |
rs687536 | snp | C/T | 0.00517822 | 0.0506191 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33152554 | cctgggcaacaagag[C/T]gaaactccgtctcaa | 55223 |
rs689187 | snp | C/T | 0.440195 | 0.162252 | utr-variant-3-prime, intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33146289 | GTCTGACAAGGGGTC[C/T]AGCCAACAGCCCCTC | 55223 |
rs784769 | snp | A/T | 0.320096 | 0.239972 | intron-variant | TRIM62 | GRCh38.p7 | 1:33175031 | tgtatatgtatatgt[A/T]tatgtatatgtatat | 55223 |
rs784770 | snp | C/T | 0.316485 | 0.240998 | intron-variant | TRIM62 | GRCh38.p7 | 1:33175102 | tggagagtagtggaa[C/T]aatctcagctcactg | 55223 |
rs784772 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33174905 | ATtatgtgtgtgtgt[A/G]tatatatatatatac | 55223 |
rs784773 | snp | A/G | 0.437965 | 0.164831 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33159144 | gccaccgtgcccagc[A/G]ggagcctcagtttct | 55223 |
rs2047437 | snp | C/T | | | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33177077 | atttgtgcatgcatg[C/T]gtgtgtgtgcatgtg | 55223 |
rs2047438 | snp | A/G | | | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33177076 | tttgtgcatgcatgt[A/G]tgtgtgtgcatgtgt | 55223 |
rs2306257 | snp | A/C | 0.444738 | 0.156771 | intron-variant | TRIM62 | GRCh38.p7 | 1:33165468 | CGCCCCGGCCAGGCT[A/C]ACCTTGGTCTCCGCC | 55223 |
rs2335238 | snp | C/G | | | missense, intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33147562 | CTGAACCCTTCAGTA[C/G]TGGCGTCCACTACTG | 55223 |
rs2335268 | snp | A/G | 0.000399281 | 0.0141238 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162674 | CAATGTCTCAAGGAC[A/G]AAAAAGGATGGGAGG | 55223 |
rs2335269 | snp | A/G | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168051 | atggtgtgtcctgca[A/G]agaaaataaaccagt | 55223 |
rs2335270 | snp | C/G | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168062 | tgcaaagaaaataaa[C/G]cagtgtgagatggag | 55223 |
rs2335271 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168167 | tgAAAATGGGGGTAA[A/G]ATACAAAAATACAAG | 55223 |
rs2335272 | snp | C/G | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168171 | AATGGGGGTAAAATA[C/G]AAAAATACAAGCTGC | 55223 |
rs2927964 | snp | C/G | 0 | 0 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33151975 | AAGGCTGGCTGTAAG[C/G]GTTTTCCTCTGGCCA | 55223 |
rs2927965 | snp | C/T | 0 | 0 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33153918 | ctcacagttcacagt[C/T]tagtgagtgagacag | 55223 |
rs2927966 | snp | A/G | 0.173965 | 0.238157 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33157909 | TTACAGGTGCACGCC[A/G]CCATGCCCAGCTAAT | 55223 |
rs2927967 | snp | C/G | 0 | 0 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33158813 | tggccaactgatgta[C/G]cttttcagagcctca | 55223 |
rs2927968 | snp | A/T | 0 | 0 | intron-variant, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33162138 | gagtgatccttctaa[A/T]gtgccaactgaatca | 55223 |
rs2927969 | snp | C/T | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33172617 | GGGCTGTGGAGTCTG[C/T]GCAGCCCTGAGCACA | 55223 |
rs2927970 | snp | C/T | 0.492337 | 0.0614248 | intron-variant | TRIM62 | GRCh38.p7 | 1:33175655 | GAATCTCAGCTCTTC[C/T]TCCTACTTGCAGTGT | 55223 |
rs2935998 | snp | C/G | | | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33183642 | CTTTAGTTTTTCAGG[C/G]TGGACCTGcccaaac | 55223 |
rs2935999 | snp | C/T | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33180043 | ttgctcaaatatcct[C/T]tccgtgaagccttct | 55223 |
rs2936000 | snp | A/G | 0 | 0 | intron-variant, utr-variant-3-prime | TRIM62 | GRCh38.p7 | 1:33163539 | GTTCTTTCCAGGGCA[A/G]AGTCACCCTTTCCCC | 55223 |
rs2936003 | snp | C/T | 0 | 0 | intron-variant, downstream-variant-500B, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33145124 | AGAGGTGGTGGTAGT[C/T]TTGGGAGCAGGCAGC | 55223 |
rs2936004 | snp | C/T | 0 | 0 | intron-variant, downstream-variant-500B, utr-variant-3-prime | TRIM62, AZIN2 | GRCh38.p7 | 1:33145075 | tggcaagagcctggt[C/T]tcgggaaccacacag | 55223 |
rs2975805 | snp | A/G | 0.0240643 | 0.107019 | intron-variant | TRIM62 | GRCh38.p7 | 1:33180209 | GGGGGACAGAGCCAA[A/G]GAGGTCATCAAAAAC | 55223 |
rs2975809 | snp | A/G | 0 | 0 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33148593 | GTATGTCAACATGTA[A/G]ATGCTCACCCACAAT | 55223 |
rs3737991 | snp | C/G | 0.00159617 | 0.0282053 | intron-variant | TRIM62 | GRCh38.p7 | 1:33181013 | CTTCCCCAGGCAGGC[C/G]GGGTAGCGCACCTGC | 55223 |
rs3753601 | snp | A/T | 0.0244538 | 0.107838 | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33182377 | TGTATTAAAACGAAC[A/T]AGAATATATTTGGAA | 55223 |
rs3753602 | snp | A/G | 0 | 0 | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33182405 | GAATACAACTTCTGC[A/G]TAAAATATAAAGATA | 55223 |
rs3766813 | snp | A/G | 0.295088 | 0.245901 | utr-variant-3-prime, intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33146907 | GGGGATGAGGGTTGG[A/G]CAGGGGTTGCCCTGA | 55223 |
rs3766815 | snp | C/T | 0.291235 | 0.246576 | intron-variant | TRIM62 | GRCh38.p7 | 1:33172824 | TGTGGAAAGCCATCT[C/T]AGCTCTGGCTTCAGG | 55223 |
rs3766817 | snp | C/G | 0.0244538 | 0.107838 | utr-variant-5-prime, intron-variant | TRIM62 | GRCh38.p7 | 1:33176533 | CGGATCCCCTCTCTG[C/G]GGGTTAGGAACCTGA | 55223 |
rs3766820 | snp | C/T | 0.286825 | 0.247273 | upstream-variant-2KB, intron-variant | TRIM62 | GRCh38.p7 | 1:33178382 | TGCCTTGAATCTCAC[C/T]CAGCAGCACATCCTC | 55223 |
rs3863726 | snp | C/T | 0.292523 | 0.246357 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33156085 | tgtctgggctcccag[C/T]agaagctggctctca | 55223 |
rs3863727 | snp | A/G | 0.344592 | 0.231414 | intron-variant | TRIM62 | GRCh38.p7 | 1:33167524 | CCGTATTGGCCCACA[A/G]GTCCTCCAGGGTGGC | 55223 |
rs3912145 | snp | C/T | 0.347473 | 0.230215 | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33148561 | GACCTGGCTGCTTTG[C/T]TAGGTTTTCTAGTGT | 55223 |
rs3965445 | snp | A/G | 0 | 0 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162593 | GGGTGAAGGAGGGAA[A/G]AGTCTTGTCTGAAAT | 55223 |
rs3965446 | snp | G/T | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33180071 | agcaaggccttaaaa[G/T]ttgagtaggagtttg | 55223 |
rs3965447 | snp | G/T | | | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33183406 | TTGCGAGAAAAATAA[G/T]TTGGTTGCTCATGCA | 55223 |
rs3965455 | snp | A/G | | | intron-variant | TRIM62, AZIN2 | GRCh38.p7 | 1:33149219 | gttgcactgggccaa[A/G]atcatcccactgcat | 55223 |
rs3965456 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33176294 | TCAAATTGGGTAAGA[A/G]GGTGTCACCCCCTCT | 55223 |
rs4045715 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33167990 | tagtctggtggggaa[A/G]acagacaacaaacaa | 55223 |
rs4045716 | snp | C/G | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168144 | gaaggatgaggagga[C/G]cccgccatgAAAATG | 55223 |
rs4045717 | snp | A/C | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168147 | ggatgaggaggaccc[A/C]gccatgAAAATGGGG | 55223 |
rs4045718 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168381 | AAGCTGGCTGTCTGA[A/G]AAAAACTTTTTTTTT | 55223 |
rs4045719 | snp | C/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168476 | cagtgtgaagtagta[C/G]ttggacttggcattg | 55223 |
rs4045720 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168726 | TTGCCTAAGAGAGTA[A/G]AAAGACCGCTCCTCA | 55223 |
rs4045721 | snp | A/G | | | intron-variant | TRIM62 | GRCh38.p7 | 1:33168859 | CCCCATGGGTCCACA[A/G]AAAACCCAGCCACCC | 55223 |
rs4045722 | snp | A/G | 0 | 0 | intron-variant | TRIM62 | GRCh38.p7 | 1:33168862 | CATGGGTCCACAAAA[A/G]ACCCAGCCACCCAGG | 55223 |
rs4045723 | snp | A/G | | | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33182974 | CTGCAAGGTGAAGAA[A/G]ACAGGGAGCTTTTCC | 55223 |
rs4045724 | snp | A/G | | | upstream-variant-2KB, utr-variant-5-prime | TRIM62 | GRCh38.p7 | 1:33183272 | TTTCTGCCTCCTCCA[A/G]AAATATCTTCATTGG | 55223 |
rs4045732 | snp | A/G | 0 | 0 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162606 | AAAAGTCTTGTCTGA[A/G]ATTGCTCCGTAGAGC | 55223 |
rs4045733 | snp | A/G | | | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162676 | ATGTCTCAAGGACAA[A/G]AAAGGATGGGAGGGA | 55223 |
rs4045734 | snp | A/G | 0 | 0 | intron-variant, downstream-variant-500B | TRIM62, AZIN2 | GRCh38.p7 | 1:33162678 | GTCTCAAGGACAAAA[A/G]AGGATGGGAGGGAAA | 55223 |
rs4045735 | snp | A/G | | | intron-variant, downstream-variant-500B | TRIM62 | GRCh38.p7 | 1:33163223 | tttgtatttttagta[A/G]agacggggtttcacc | 55223 |