iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs12661	snp	G/T	0	0	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137882834	ACAGTTTCTCTGTGT[G/T]CTTTGTGGTTGCTGT	7128
rs582757	snp	A/G	0.383246	0.211531	intron-variant	TNFAIP3	GRCh38.p7	6:137876687	CTACATCTCACAAGA[A/G]TGCTAAAAGGATAAA	7128
rs583522	snp	A/G	0.383439	0.21141	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868747	AAATGTTTCAGATAC[A/G]TTATAAGTGGCAAAC	7128
rs598493	snp	A/G	0.382666	0.211895	intron-variant	TNFAIP3	GRCh38.p7	6:137874265	GGTGTGGAAAGTCGT[A/G]TTGACAACACGGAAT	7128
rs610604	snp	A/C	0.474272	0.110462	intron-variant	TNFAIP3	GRCh38.p7	6:137878280	CTGTGATGAAGAGCT[A/C]ACACTTTTCACGCAA	7128
rs629953	snp	C/T	0.497749	0.0334707	intron-variant	TNFAIP3	GRCh38.p7	6:137873904	AAGTTACATTGTTTC[C/T]TACATTACTCTATAA	7128
rs643177	snp	A/G	0.382279	0.212137	intron-variant	TNFAIP3	GRCh38.p7	6:137874556	GTTTAGGTGACCTGG[A/G]GGAAATTCCTTAAGT	7128
rs661561	snp	G/T	0.474759	0.109468	intron-variant	TNFAIP3	GRCh38.p7	6:137876194	TTCAGTGTCTAGTTA[G/T]AGATGTGAATTAATG	7128
rs662887	snp	A/C	0.00835141	0.0640778	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868725	GTGGCAAACAATGCA[A/C]TATTACCCTTAACTT	7128
rs719149	snp	A/G	0.32153	0.239548	intron-variant	TNFAIP3	GRCh38.p7	6:137871608	GCTTTAATAGGACAA[A/G]CCCAAACTCAAATCA	7128
rs719150	snp	A/G	0.326741	0.23793	intron-variant	TNFAIP3	GRCh38.p7	6:137871624	CCCAAACTCAAATCA[A/G]TCTTGAGATTTAGTA	7128
rs1007680	snp	A/T			intron-variant	TNFAIP3	GRCh38.p7	6:137875449	ATCAGGGATTTTTTT[A/T]TAAAGCAGGTGCTGT	7128
rs1065077	snp	C/T			synonymous-codon, utr-variant-5-prime	TNFAIP3	GRCh38.p7	6:137874987	CTGGCAACTGGAGTC[C/T]CTCAAATCTCAGGAA	7128
rs2230926	snp	G/T	0.115057	0.210456	TNFAIP3	6	allele_origin=G(germline)/T(germline)	6:137874929	TGAGGAAGGCGCTGT[G/T]CAGCACGCTCAAGGA	7128
rs2307859	in-del	-/AGG	0.433076	0.170245	intron-variant	TNFAIP3	GRCh38.p7	6:137874830	CACCTGAGGACAGAA[-/AGG]AGGAGAAGAGAAGGA	7128
rs2307860	in-del	-/TT	0.497829	0.0328757	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868982	GCTTGCCTGACTCTT[-/TT]ATTTTTCTCTTCTGA	7128
rs2575011	snp	A/G	0.375598	0.21616			GRCh38.p7	6:137869380	TCCGTCCGTCCGTCC[A/G]TCCATCCATCCATCC	7128
rs3214646	in-del	-/A	0.00922475	0.0672851	intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137871188	AAAGGAAAAAAAAAA[-/A]GCCATTCTATTAGCC	7128
rs3734553	snp	C/T	1.68074e-05	0.00289887	missense, synonymous-codon	TNFAIP3	GRCh38.p7	6:137881063	GTGCTTTGTGTGGTT[C/T]GAGGCACATCTCTGC	7128
rs3757172	snp	C/T	0	0	intron-variant	TNFAIP3	GRCh38.p7	6:137877958	TGTGTCTAGTCTCCA[C/T]CAGCATTAGCAGCCA	7128
rs3757173	snp	C/T	0.326506	0.238006	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869017	AAGATTTTAAACAAA[C/T]GAGGTGTTATCTCTT	7128
rs3757174	snp	C/T	0.000798403	0.0199641	upstream-variant-2KB, intron-variant	TNFAIP3, LOC100130476	GRCh38.p7	6:137866064	AAAGTATCCTCCTCT[C/T]GCCAGTAAGGACTTG	7128
rs3757175	snp	C/T			upstream-variant-2KB, nc-transcript-variant	TNFAIP3, LOC100130476, LOC107986649	GRCh38.p7	6:137865228	CCTGAGGGGCCACGT[C/T]CATACCTGCCACTGC	7128
rs3799491	snp	C/T	0.0372196	0.131242	intron-variant	TNFAIP3	GRCh38.p7	6:137874255	GTCGTATTGACAACA[C/T]GGAATTACCTATGGC	7128
rs3834310	in-del	-/C	0.142272	0.225598	intron-variant	TNFAIP3	GRCh38.p7	6:137877919	TAAGACGCAGACACA[-/C]TCAAAGGCGCTTGTC	7128
rs5029922	snp	A/G	0.0235261	0.105875	upstream-variant-2KB, intron-variant	TNFAIP3, LOC100130476, LOC107986649	GRCh38.p7	6:137865597	GAGTACCTGTCTCAC[A/G]GGATCTTTCCTGAGA	7128
rs5029923	snp	C/T	0.02016	0.0983543	upstream-variant-2KB, intron-variant	TNFAIP3, LOC100130476	GRCh38.p7	6:137866041	TCCAGCCCCCACCCC[C/T]ATCTCTGCAAGTCCT	7128
rs5029924	snp	C/T	0.227664	0.249	upstream-variant-2KB, intron-variant, utr-variant-5-prime	TNFAIP3, LOC100130476	GRCh38.p7	6:137866361	GCCAGTATTATCAGC[C/T]ATCAGCACCCTGGGG	7128
rs5029925	in-del	-/G	0.0905309	0.192535	intron-variant, nc-transcript-variant	TNFAIP3, LOC100130476	GRCh38.p7	6:137868009	CAGCCCGGCGGAGGT[-/G]GGGGGGCTTCAGTCC	7128
rs5029926	snp	A/G	0.326506	0.238006	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868378	TTGTTAATTAAAGGG[A/G]CTTCTGGACCGCAAC	7128
rs5029927	snp	A/G	0.021333	0.101051	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868593	TGCCCAGAGTGGAAA[A/G]ATAAAACAAGGGGGA	7128
rs5029928	snp	C/T	0.326506	0.238006	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868805	CCAAGACCTGGAAAT[C/T]TGGGCAGTGGGTTTT	7128
rs5029929	snp	C/T	0.00597247	0.0543191	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869500	TCCACCTGTAGAGGA[C/T]GTCTGACATCAAAAG	7128
rs5029930	snp	A/C	0.326976	0.237854	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869547	CAGAGAATGACTCCC[A/C]CTATGCCTTTCCCAG	7128
rs5029931	snp	C/G	0.0908922	0.192833	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869679	GAATTATCTCAACAC[C/G]TTATCAATGGTGTTG	7128
rs5029932	snp	C/T	0.0134861	0.0810011	intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137870506	CTTAAAATTGCAAAG[C/T]ATCTTGCTGGAAATG	7128
rs5029933	snp	A/G	0.0908922	0.192833	intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137870925	AGGGTTGGCTCCCTG[A/G]CAAACATTACTGAAA	7128
rs5029934	snp	A/T	0.00388348	0.0438937	intron-variant	TNFAIP3	GRCh38.p7	6:137872372	GACTGTACAAGCTCA[A/T]TTAAATGCTCATAGT	7128
rs5029935	snp	A/G	0.0174175	0.0916809	intron-variant	TNFAIP3	GRCh38.p7	6:137873635	GTAAGCACAAGAAGA[A/G]AAAAAGCCTTATCTT	7128
rs5029936	snp	A/G	0.115788	0.21092	intron-variant	TNFAIP3	GRCh38.p7	6:137873800	GAAGGAATACTGGCT[A/G]TGGAAGTATATTTGA	7128
rs5029937	snp	G/T	0.24019	0.249807	intron-variant	TNFAIP3	GRCh38.p7	6:137874014	ATTTATCGTTTGGGG[G/T]TTGAAAAAAATGCAG	7128
rs5029938	snp	C/T	0.0901694	0.192235	intron-variant	TNFAIP3	GRCh38.p7	6:137874496	tagggctttagagat[C/T]atcacttactgccct	7128
rs5029939	snp	C/G	0.24019	0.249807	intron-variant	TNFAIP3	GRCh38.p7	6:137874586	CTAGTTAGGAGCAGA[C/G]TTAAGCTAGAACCAA	7128
rs5029941	snp	C/T	0.00330588	0.0405218	TNFAIP3	6	allele_origin=T(germline)/C(germline)	6:137874923	TGGTACTGAGGAAGG[C/T]GCTGTTCAGCACGCT	7128
rs5029944	snp	A/G	0.00517822	0.0506191	intron-variant	TNFAIP3	GRCh38.p7	6:137875463	TTAAAAGCAGGTGCT[A/G]TCCCCGTCCTCCCCA	7128
rs5029945	snp	A/C	0.0275645	0.114116	intron-variant	TNFAIP3	GRCh38.p7	6:137875471	AGGTGCTGTCCCCGT[A/C]CTCCCCAACTTTTGA	7128
rs5029946	snp	A/G	0.00358779	0.0422022	intron-variant	TNFAIP3	GRCh38.p7	6:137875525	TAAAGGAAGAAAACC[A/G]AAATGGGGAAAAAAG	7128
rs5029947	snp	C/G/T	0.011207	0.0740139	intron-variant	TNFAIP3	GRCh38.p7	6:137875680	TTTTTTCACCCCGCT[C/G/T]CCCTTAGAACTGGAA	7128
rs5029948	snp	C/T	0.0854716	0.18823	intron-variant	TNFAIP3	GRCh38.p7	6:137876192	TGCATTAATTCACAT[C/T]TATAACTAGACACTG	7128
rs5029949	snp	A/G	0.153997	0.230832	intron-variant	TNFAIP3	GRCh38.p7	6:137876369	TATGACTTGGAAAGT[A/G]CTTTCATACATGATA	7128
rs5029950	snp	A/G	0.0219753	0.102493	intron-variant	TNFAIP3	GRCh38.p7	6:137876643	TGTGGAATAAGCACT[A/G]TGCTTTGGAAATATT	7128
rs5029951	snp	C/T	0.00557542	0.0525036	intron-variant	TNFAIP3	GRCh38.p7	6:137877845	AGATGACAAGGAAGC[C/T]GTAAGAGAATCTGTC	7128
rs5029952	snp	A/G	0.00557542	0.0525036	intron-variant	TNFAIP3	GRCh38.p7	6:137877971	TGGTGGAGACTAGAC[A/G]CAAGTTTAAAGTTAG	7128
rs5029953	snp	A/G	0.0980852	0.198549	intron-variant	TNFAIP3	GRCh38.p7	6:137879623	GATGTGCTTTTACTA[A/G]ACCATTCAGGTCTGG	7128
rs5029954	snp	A/G	0.00755907	0.0610114	intron-variant	TNFAIP3	GRCh38.p7	6:137880430	TGGCTCCCCAGGTCC[A/G]AAATGCTACCTCCAA	7128
rs5029955	snp	A/G	0.00391388	0.0440638	intron-variant	TNFAIP3	GRCh38.p7	6:137880703	ACAGATAGGTGTGTC[A/G]CCTGTTGCTCACAGA	7128
rs5029956	snp	C/T	0.0167071	0.0898579	synonymous-codon, utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137881241	GCGTTGCCGGGCCCC[C/T]GCCTGTGATCATTTT	7128
rs5029957	snp	C/G/T	1.72719e-05	0.00293865	missense, utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137881242	CGTTGCCGGGCCCCC[C/G/T]CCTGTGATCATTTTG	7128
rs5029958	snp	C/T	0.0236746	0.106192	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137883172	AATTATTTATACTTA[C/T]TATAAAAAGTATTTG	7128
rs5029959	in-del	-/C	0.0209421	0.100162	downstream-variant-500B	TNFAIP3	GRCh38.p7	6:137883500	GTCCTCAAGCACAAG[-/C]CCCCGCTTGACAATG	7128
rs5029961	snp	A/G	0.0124219	0.0778244	upstream-variant-2KB, nc-transcript-variant, intron-variant	TNFAIP3, LOC100130476	GRCh38.p7	6:137866592	GTTTACCTAAGACTG[A/G]GGCCACGGGGTCGGG	7128
rs5029962	snp	A/C	0.0298439	0.118454	upstream-variant-2KB, intron-variant	TNFAIP3, LOC100130476	GRCh38.p7	6:137867103	GCAGGCCCGGTCGGG[A/C]GGAGGCCGCGCGCGC	7128
rs5029963	snp	A/G	0.00318978	0.0398085	intron-variant	TNFAIP3	GRCh38.p7	6:137873606	TACTGGTGCATCTCA[A/G]TAAAGAACTGAAAGT	7128
rs5029964	snp	A/G	0.00126105	0.0250786	intron-variant	TNFAIP3	GRCh38.p7	6:137876204	CATCTATAACTAGAC[A/G]CTGAAACATCAGGGT	7128
rs5029965	snp	A/G	0.0107246	0.0724382	intron-variant	TNFAIP3	GRCh38.p7	6:137879715	ATCTTAAAATCTGAA[A/G]AGTAGTAACTGGAGA	7128
rs5029966	snp	A/T	0.00159617	0.0282053	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137882152	ATTTTTTTAAATTAT[A/T]TTGAAATGCTGCCCT	7128
rs5029967	snp	G/T	0.0123222	0.0776987	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137882399	TCTCCTGAGAGAACA[G/T]CCTTGCTTTGAGTCA	7128
rs5029968	snp	A/G/T	0.022469	0.103584	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137882526	ACATACATATTCATC[A/G/T]ATGTTTCGTGCTTCT	7128
rs5880363	in-del	-/A/AA/AAAA	0.629345	0.158102	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868699	GAGGTAACAAATGTT[-/A/AA/AAAA]AAAAAAAAAAAAGTT	7128
rs7750604	snp	C/T	0.328382	0.237395	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869396	GGACGGACGGACGGA[C/T]GGATAGATGATATTG	7128
rs9494887	snp	C/T	0.0103295	0.0711199	intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137870265	GTATAGAATTTATTG[C/T]TCTATTATTATTTTG	7128
rs10572611	in-del	-/GCCT	0.0111196	0.0737302	intron-variant	TNFAIP3	GRCh38.p7	6:137880647	CAGAGCTTCCCAGGG[-/GCCT]GCCTCCACCTAATGG	7128
rs12662351	snp	A/G			intron-variant, upstream-variant-2KB	LOC100130476, TNFAIP3, LOC107986649	GRCh38.p7	6:137864390	CTGATTCTTGATTAA[A/G]AAAGGCTCATGAAAT	7128
rs13190731	snp	A/C	0	0	intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137870943	AACATTACTGAAAAC[A/C]CGGGTTATTCCCCTC	7128
rs28573854	snp	A/G			intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869811	CAAATAAGATGTTGC[A/G]GGAATGGAATTAACA	7128
rs33918141	in-del	-/A			intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868706	CAAATGTTAAAAAAA[-/A]AAAAAGTTAAGGGTA	7128
rs34137053	in-del	-/A/AA	0	0	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137868711	GTTAAAAAAAAAAAA[-/A/AA]GTTAAGGGTAATATT	7128
rs34143521	in-del	-/T			intron-variant	TNFAIP3	GRCh38.p7	6:137875670	ATTCAAGCTTTTTTT[-/T]CACCCCGCTCCCCTT	7128
rs34146437	in-del	-/C			intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869517	CTGACATCAAAAGAG[-/C]AGCACCATCTGATCC	7128
rs34427723	in-del	-/C			upstream-variant-2KB, nc-transcript-variant	TNFAIP3, LOC100130476, LOC107986649	GRCh38.p7	6:137865304	CAAGACATGAGCCAG[-/C]ATAGGGGCAGTGGAA	7128
rs34523456	in-del	-/G			intron-variant	TNFAIP3	GRCh38.p7	6:137872694	GAAAGAAAACTGGGG[-/G]ATAGCTACTATCTGC	7128
rs34528144	snp	C/G			intron-variant	TNFAIP3	GRCh38.p7	6:137880429	GTGGCTCCCCAGGTC[C/G]GAAATGCTACCTCCA	7128
rs34902738	in-del	-/C			intron-variant, upstream-variant-2KB	TNFAIP3	GRCh38.p7	6:137870372	AGTGATCCTCCTCCC[-/C]TCGACCTCCCAAAGT	7128
rs34935799	in-del	-/T			frameshift-variant, intron-variant	TNFAIP3	GRCh38.p7	6:137875759	GCCCGAAGTGGACTT[-/T]CAGTACAACTCACTG	7128
rs35302914	in-del	-/T			intron-variant	TNFAIP3	GRCh38.p7	6:137876229	CAGGGTTTTCCTTTT[-/T]GCTTCTTATTAAAAC	7128
rs35814290	in-del	-/C			intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869515	GTCTGACATCAAAAG[-/C]AGAGCACCATCTGAT	7128
rs57087937	snp	C/T	0.312593	0.242037	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869392	GGACGGACGGACGGA[C/T]GGACGGATAGATGAT	7128
rs58777290	in-del	-/G			intron-variant	TNFAIP3	GRCh38.p7	6:137880651	GCTTCCCAGGGGCCT[-/G]CCTCCACCTAATGGC	7128
rs59693083	snp	A/G	0.325799	0.238232	upstream-variant-2KB, intron-variant	TNFAIP3, LOC100130476, LOC107986649	GRCh38.p7	6:137865395	CAAAGGAGCACCAGC[A/G]GGAGAGTGGTGTGAG	7128
rs59699063	snp	C/T	0.31357	0.241783	intron-variant, upstream-variant-2KB	LOC100130476, TNFAIP3, LOC107986649	GRCh38.p7	6:137864744	GTTAATAAATATTCT[C/T]TTCTTTAAAGAGTTC	7128
rs59986260	in-del	-/TT			intron-variant	TNFAIP3	GRCh38.p7	6:137873975	AGGAGTTAACTTTTT[-/TT]GTTTTAAACATTCCC	7128
rs60589019	snp	C/T	0.00358779	0.0422022	utr-variant-3-prime	TNFAIP3	GRCh38.p7	6:137883266	TTTTCTAAATAAATG[C/T]AACTTTTCACAAGAG	7128
rs60852503	in-del	-/AAAA/AAAAAAAA/AAAAAAAAA	0	0	intron-variant, upstream-variant-2KB	LOC100130476, TNFAIP3, LOC107986649	GRCh38.p7	6:137864350	CAAAAAAAAAAAAAA[-/AAAA/AAAAAAAA/AAAAAAAAA]GAATCAACAACCAAT	7128
rs61249575	snp	A/T	0.0901694	0.192235	intron-variant	TNFAIP3	GRCh38.p7	6:137875450	TCAGGGATTTTTTTT[A/T]AAAGCAGGTGCTGTC	7128
rs61593413	snp	A/T	0.314057	0.241654	intron-variant, upstream-variant-2KB	LOC100130476, TNFAIP3, LOC107986649	GRCh38.p7	6:137864795	ATAGCTCAAATTAAA[A/T]CTCCTTCAAGGCTTT	7128
rs61748667	snp	A/C/G	3.3617e-05	0.0040997	synonymous-codon	TNFAIP3	GRCh38.p7	6:137878747	GCTCCCTGGCATGGC[A/C/G]CTCGGGGCCTCTCGG	7128
rs61756235	snp	A/G			missense	TNFAIP3	GRCh38.p7	6:137876122	TTCTCGGCTATGACA[A/G]CCATCATTTTGTACC	7128
rs71009567	in-del	-/TCCA	0	0	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869379	CCGTCCGTCCGTCCG[-/TCCA]TCCATCCATCCATCC	7128
rs71547071	in-del	-/CGGA	0.5	0	intron-variant, upstream-variant-2KB	TNFAIP3, LOC100130476	GRCh38.p7	6:137869399	GGACGGACGGACGGA[-/CGGA]TAGATGATATTGTGA	7128
rs71547072	in-del	-/C	0.5	0	intron-variant	TNFAIP3	GRCh38.p7	6:137871754	CAGAGCACATTGAGG[-/C]TTGGAGAATGCATTT	7128

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