SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs1138476 | snp | A/G | 0.080285 | 0.183567 | utr-variant-5-prime, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67062045 | GAAACCTAGCGAGGT[A/G]AAGTTGCGTCTTGGT | 10987 |
rs1138477 | snp | G/T | | | synonymous-codon | COPS5 | GRCh38.p7 | 8:67059403 | CTCAGCATTGGCTCT[G/T]CTGAAGATGGTGATG | 10987 |
rs1138478 | snp | C/T | | | synonymous-codon | COPS5 | GRCh38.p7 | 8:67059367 | CAGATCGGGAGGCAA[C/T]TTGGAAGTGATGGGT | 10987 |
rs1804694 | snp | G/T | 0 | 0 | missense, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061972 | TCCGGGAGCGGTATG[G/T]CCCAGAAAACCTGGG | 10987 |
rs4072321 | snp | A/G | 0.252983 | 0.249982 | intron-variant | COPS5 | GRCh38.p7 | 8:67050237 | cgatctcctgacctc[A/G]tgatccgcccgcctc | 10987 |
rs5892073 | in-del | -/GT | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67050614 | TGTGTGTGTGTGTGT[-/GT]ATCTTGACCTTCTTT | 10987 |
rs5892075 | in-del | -/A | 0.309894 | 0.242719 | intron-variant | COPS5 | GRCh38.p7 | 8:67050768 | AATGCTAAGAGAAAG[-/A]AAAAAAAAAAAAAGA | 10987 |
rs6997490 | snp | A/G | 0.436265 | 0.166749 | intron-variant | COPS5 | GRCh38.p7 | 8:67058008 | TCTCTTTACTACACT[A/G]TTCTTATTTCTCAGT | 10987 |
rs7000650 | snp | C/T | 0.0850919 | 0.187897 | downstream-variant-500B | COPS5 | GRCh38.p7 | 8:67043023 | CTCATATTCAAGAAC[C/T]GTAATGGATACTAGA | 10987 |
rs7812572 | snp | A/C | 0.198324 | 0.244601 | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061749 | ATATTCTGTCCCCCT[A/C]CCAGTCGGTGAAAGC | 10987 |
rs7828748 | snp | C/G | 0.0558544 | 0.157504 | intron-variant | COPS5 | GRCh38.p7 | 8:67052346 | AATTTAGCAAGAGAA[C/G]AATTATGTGAGGGGA | 10987 |
rs7840028 | snp | C/T | 0.164873 | 0.23506 | intron-variant | COPS5 | GRCh38.p7 | 8:67044895 | gtgaaccactgtgcc[C/T]ggccTAAAATTCAAA | 10987 |
rs9772187 | snp | A/G | 0.327741 | 0.237605 | intron-variant | COPS5 | GRCh38.p7 | 8:67044718 | gatgcttctgcctca[A/G]cctcctgaatagctg | 10987 |
rs10089495 | snp | A/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67059584 | CGGGGAGAAAAAGTA[A/T]AAAAGGACAGTTTTT | 10987 |
rs11557196 | snp | G/T | 0.0151506 | 0.0857075 | missense | COPS5 | GRCh38.p7 | 8:67059264 | GAAACCCGAGTAAAT[G/T]CTCAGGCTGCTGCAT | 10987 |
rs11557197 | snp | C/T | 1.64762e-05 | 0.00287016 | synonymous-codon, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061922 | GGAAGCTCAGAGTAT[C/T]GATGAAATCTACAAA | 10987 |
rs11557198 | snp | A/C | 0 | 0 | missense | COPS5 | GRCh38.p7 | 8:67059351 | TTGGAAGTGATGGGT[A/C]TGATGCTAGGAAAGG | 10987 |
rs11557199 | snp | A/C/G | 3.29625e-05 | 0.00405958 | synonymous-codon, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061970 | CGGGAGCGGTATGGC[A/C/G]CAGAAAACCTGGGAA | 10987 |
rs11557200 | snp | A/G | 0.142427 | 0.225672 | synonymous-codon | COPS5 | GRCh38.p7 | 8:67059217 | ATACATAGAAAATGC[A/G]AAACAGGTAAAAATG | 10987 |
rs11998281 | snp | A/G | 0.0322114 | 0.122752 | downstream-variant-500B | COPS5 | GRCh38.p7 | 8:67042929 | GTTCTGACAATCAGT[A/G]TGGCAAGTGAAATGC | 10987 |
rs12156085 | snp | A/T | 0.108337 | 0.205989 | intron-variant | COPS5 | GRCh38.p7 | 8:67056654 | AAAAAAAAAAAAAAa[A/T]atatatatatatata | 10987 |
rs12543468 | snp | C/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67050146 | agctgggactacagg[C/T]gcccaccacctcgcc | 10987 |
rs13250414 | snp | A/C | 0.00338409 | 0.040995 | intron-variant | COPS5 | GRCh38.p7 | 8:67046501 | GAATTAGTACTTATG[A/C]CAATATTTATAAAAA | 10987 |
rs13250906 | snp | C/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67046536 | ATTTTAAAAGCTTTT[C/T]TGggtcgggcgcggt | 10987 |
rs16933142 | snp | C/T | 0.00279162 | 0.0372561 | intron-variant | COPS5 | GRCh38.p7 | 8:67046454 | GCTTAGTAATATTAG[C/T]TAATTTTGCTATTGT | 10987 |
rs16933147 | snp | C/T | 0.24932 | 0.249999 | intron-variant | COPS5 | GRCh38.p7 | 8:67046960 | TCACTTAGCTATAAC[C/T]GCAACTAAAGAGCAT | 10987 |
rs16933148 | snp | C/T | 0.103082 | 0.202275 | intron-variant | COPS5 | GRCh38.p7 | 8:67050357 | TCTTCTGATTCACTC[C/T]GGGAACCTCTCCTCC | 10987 |
rs16933150 | snp | A/G | 0.00438332 | 0.0466095 | intron-variant | COPS5 | GRCh38.p7 | 8:67051420 | TTATGGCCAGATTTA[A/G]GTGAGTTACACTTTA | 10987 |
rs17333264 | snp | A/G | 0.031825 | 0.122064 | intron-variant | COPS5 | GRCh38.p7 | 8:67049792 | ATGACTCCTGCTGCT[A/G]TAGCTCATATTCTCC | 10987 |
rs28684544 | snp | A/C | | | intron-variant | COPS5 | GRCh38.p7 | 8:67052675 | TGCCCGCCTTGGCGT[A/C]CCAAAGTGCTGGGAG | 10987 |
rs34485007 | in-del | -/G | | | intron-variant | COPS5 | GRCh38.p7 | 8:67044950 | TCTTTGCAACTTTGT[-/G]ATAGCCTATATATCT | 10987 |
rs34629150 | in-del | -/GT | | | intron-variant | COPS5 | GRCh38.p7 | 8:67050559 | AATATGTGAGTGTGA[-/GT]GTGTGTGTGTGTGTG | 10987 |
rs34933897 | in-del | -/T | | | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061465 | CTCATAGCTATTTTT[-/T]GAGACCTTGGGCTGC | 10987 |
rs35089748 | in-del | -/A | | | intron-variant | COPS5 | GRCh38.p7 | 8:67048178 | GGAGGCCGAGGTGGG[-/A]AAATCACCTGAGTCC | 10987 |
rs35425829 | in-del | -/C | | | intron-variant | COPS5 | GRCh38.p7 | 8:67051103 | GTGGTGGTGCAGAAT[-/C]CCCACCCTAGCCCTG | 10987 |
rs36030524 | in-del | -/GT/TG | | | intron-variant | COPS5 | GRCh38.p7 | 8:67050616 | TGAGAGTGTGTGTGT[-/GT/TG]GTGTGTGTGTGTGTG | 10987 |
rs36056646 | snp | A/C | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67052074 | GATATACATTGAATA[A/C]CAATAAGTGATGCTA | 10987 |
rs36097729 | in-del | -/A | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67050768 | GAAAAAAAAAAAAAA[-/A]GACCTCATAATATTG | 10987 |
rs55970519 | snp | C/T | | | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67060534 | GAATCGAAATCTTGG[C/T]TTCTCCCTTTACTGG | 10987 |
rs56902031 | snp | C/G | 0.170408 | 0.236992 | intron-variant | COPS5 | GRCh38.p7 | 8:67044849 | AGGTGATCTGCCTGC[C/G]TTGGCCTCCCAAAGT | 10987 |
rs57126289 | snp | A/G | | | upstream-variant-2KB, utr-variant-5-prime, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67064137 | GCATGGGAGGCTGGA[A/G]AGGCTGCAATAGATT | 10987 |
rs57797445 | in-del | -/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67056658 | AAAAAAAAAAATATA[-/T]ATATATATATATATA | 10987 |
rs58172894 | snp | C/T | 0.0513262 | 0.151752 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063273 | GCCTGTAGTCCCGGC[C/T]ACTCATGAGGCTGAG | 10987 |
rs59888838 | snp | A/G | 0.0402882 | 0.136092 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67064000 | AAAGCCCAGGACCCA[A/G]CGTTGACCACACTCC | 10987 |
rs60369628 | in-del | -/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67056660 | AAAAAAAAATATATA[-/T]ATATATATATATATA | 10987 |
rs60703290 | snp | A/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67056656 | AAAAAAAAAAAAATA[A/T]ATATATATATATATA | 10987 |
rs60709680 | in-del | -/AT | | | intron-variant | COPS5 | GRCh38.p7 | 8:67058075 | AAACTGGTTTTAAAA[-/AT]TTCTTACCACCACTG | 10987 |
rs60730687 | in-del | -/GT | 0.231482 | 0.249313 | intron-variant | COPS5 | GRCh38.p7 | 8:67050558 | TGTGTGTGTGTGTGT[-/GT]ATCTTGACCTGGAAA | 10987 |
rs61273709 | snp | A/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67043932 | ATTGCCATAGTAAAA[A/T]TTTTGCTTCATAATT | 10987 |
rs62513081 | snp | G/T | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67044617 | TCTTTTTTTTTTTTG[G/T]AGACAGAGTTTCGCT | 10987 |
rs71249414 | in-del | -/TATATATATATATATATATATATATATATATATATA | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67056711 | ATATATATATATATA[lengthTooLong]AAAATGAGAAAAACA | 10987 |
rs71553289 | in-del | -/A | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67050043 | CTCACTCTTTCACCT[-/A]AGGCTGGAGTGCAGT | 10987 |
rs71553290 | in-del | -/TATATATATATATATA | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67056653 | AAAAAAAAAAAAAAA[-/TATATATATATATATA]TATATATATATATAT | 10987 |
rs72654931 | snp | A/C | | | intron-variant | COPS5 | GRCh38.p7 | 8:67045510 | ACACACTTTAAAGAT[A/C]CACTTAAGGGCTGCT | 10987 |
rs72654933 | snp | A/G | | | intron-variant | COPS5 | GRCh38.p7 | 8:67059849 | TTCTGACATTCATCT[A/G]CTAAGGTCTGAATCT | 10987 |
rs73691190 | snp | A/T | 0.170408 | 0.236992 | intron-variant | COPS5 | GRCh38.p7 | 8:67049485 | AAAAAGAAAAAAAAA[A/T]AATCCTTGGCCTTCC | 10987 |
rs73691191 | snp | C/T | 0.170408 | 0.236992 | intron-variant | COPS5 | GRCh38.p7 | 8:67055136 | TCTGAGCCATGAGCC[C/T]GCTGGCACATTTTAC | 10987 |
rs73691192 | snp | A/G | 0.252983 | 0.249982 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063661 | GAACTCTTTCTTGAC[A/G]CTCCAATTACCATTC | 10987 |
rs73691193 | snp | C/G | 0.253544 | 0.249975 | upstream-variant-2KB, utr-variant-5-prime, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67064144 | AGGCTGGAGAGGCTG[C/G]AATAGATTTAGCCTG | 10987 |
rs74387468 | snp | A/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67051383 | TAAGTAAAAAAAAAA[A/T]TTCAACTACGTCACA | 10987 |
rs74394509 | snp | A/G | 0.0872718 | 0.189788 | intron-variant | COPS5 | GRCh38.p7 | 8:67050541 | AATGAAGTTTTGCCC[A/G]GAAATATGTGAGTGT | 10987 |
rs74634695 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063396 | AAAAAAAAAAAAAAA[A/G]GAAAGAAAGAAAGAA | 10987 |
rs74713534 | snp | A/G | 0.102726 | 0.202016 | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061281 | CCTCCGTGTGCCTCC[A/G]AAATAATTACCAGCA | 10987 |
rs75181003 | snp | A/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67043418 | CTCCAATGAGTTTAG[A/T]TTTATTCATACTTCT | 10987 |
rs75381739 | snp | G/T | | | missense | COPS5 | GRCh38.p7 | 8:67043237 | TCAGAGACTGTTTAA[G/T]AGATGTTAATTTGAT | 10987 |
rs75732965 | snp | A/T | 0.252983 | 0.249982 | intron-variant | COPS5 | GRCh38.p7 | 8:67049430 | GATCGTGCCACCACA[A/T]TACCCTGGACAACAG | 10987 |
rs75865562 | snp | A/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67056809 | TCTAATAAAAAAAAA[A/T]TACTGTTTCTACTTT | 10987 |
rs75941850 | snp | C/T | 0.0146672 | 0.084371 | intron-variant | COPS5 | GRCh38.p7 | 8:67054829 | CTATGTGGCATGCCC[C/T]GTTTTAAATCCAAGG | 10987 |
rs76249106 | snp | A/C | 0.5 | 0 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063373 | AGACAGAGCCAGTCT[A/C]AAAAAAAAAAAAAAA | 10987 |
rs76824090 | snp | C/G | 0.0221141 | 0.102801 | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061249 | TGGAGTAACATTTTA[C/G]AGACCAGGTAGTAGA | 10987 |
rs76884291 | snp | A/G | | | intron-variant | COPS5 | GRCh38.p7 | 8:67043417 | ACTCCAATGAGTTTA[A/G]TTTTATTCATACTTC | 10987 |
rs77145121 | snp | A/C | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67045453 | AGCGAGATTCTGTCT[A/C]AAAAAAAAAAAGAAA | 10987 |
rs77164758 | snp | C/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67049401 | CCTGGGAAGTTGAGG[C/T]TGCAGTGAGCTGAGA | 10987 |
rs77364537 | snp | C/T | 0.00318978 | 0.0398085 | intron-variant | COPS5 | GRCh38.p7 | 8:67050410 | TGAAGGAGTTTTCTA[C/T]GCTGCGGCTCAGCAG | 10987 |
rs77590777 | snp | A/G | 0.170408 | 0.236992 | intron-variant | COPS5 | GRCh38.p7 | 8:67055923 | AATTCTTACACTTTT[A/G]TAACTTTGACTTTTT | 10987 |
rs77646538 | snp | G/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67044615 | TTTCTTTTTTTTTTT[G/T]GGAGACAGAGTTTCG | 10987 |
rs77739367 | snp | A/T | 0.0528381 | 0.153711 | intron-variant | COPS5 | GRCh38.p7 | 8:67055168 | AACCATAAGGAAGTC[A/T]ATATGGCTGGATTGC | 10987 |
rs77976210 | snp | A/G | 0.0314385 | 0.121371 | intron-variant | COPS5 | GRCh38.p7 | 8:67045174 | ATCCTAATTTTGGCC[A/G]GGTGCGGTGGTTCAT | 10987 |
rs77976225 | snp | A/T | 0.0107246 | 0.0724382 | intron-variant | COPS5 | GRCh38.p7 | 8:67050616 | ATGTGAGTGTGAGAG[A/T]GTGTGTGTGTGTGTG | 10987 |
rs78029837 | snp | A/C | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67046828 | AACTCTGTCTCCAAA[A/C]AAAAAAAAAAAAAAA | 10987 |
rs78062985 | snp | A/G | 0.170408 | 0.236992 | intron-variant | COPS5 | GRCh38.p7 | 8:67055590 | AAAGGTACGTAGGCC[A/G]GGCACAGTGGCTCAC | 10987 |
rs78465116 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063409 | AAAGAAAGAAAGAAA[A/G]AAAAAAGAAGAAAAA | 10987 |
rs78475503 | snp | C/T | 0.000798403 | 0.0199641 | intron-variant | COPS5 | GRCh38.p7 | 8:67058368 | GGCAATTGCTTACCC[C/T]TACAGAGATATTCTT | 10987 |
rs78588671 | snp | A/G | 0.0689305 | 0.172377 | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67060768 | TATTGCTCAGTTGAG[A/G]GTTCACTTATGTCAG | 10987 |
rs78984766 | snp | A/G | 0.102726 | 0.202016 | intron-variant, upstream-variant-2KB | COPS5, CSPP1 | GRCh38.p7 | 8:67061257 | CATTTTAGAGACCAG[A/G]TAGTAGAGCCTCCGT | 10987 |
rs79277518 | snp | A/T | 0 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67056810 | CTAATAAAAAAAAAA[A/T]ACTGTTTCTACTTTC | 10987 |
rs79788781 | snp | A/G | 0.0271762 | 0.113356 | intron-variant | COPS5 | GRCh38.p7 | 8:67049851 | GTGGTTCTAACCACT[A/G]TATATACTGCAGTAT | 10987 |
rs79789182 | snp | A/G | | | intron-variant | COPS5 | GRCh38.p7 | 8:67043796 | AAAAGTATAAGGCAA[A/G]AGAAATGACAAAACC | 10987 |
rs79944525 | snp | C/T | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67049666 | TTGCAATGCTTTACC[C/T]TGAGATTTTTCTGGA | 10987 |
rs80059572 | snp | A/T | 0.00119737 | 0.0244387 | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67062638 | CATGCGTAAAAGCTA[A/T]CGGGCTCGTGGTGGC | 10987 |
rs80305712 | snp | A/T | | | intron-variant | COPS5 | GRCh38.p7 | 8:67043420 | CCAATGAGTTTAGTT[A/T]TATTCATACTTCTCA | 10987 |
rs111714169 | snp | A/G | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67046802 | TACTCCAGCCTGGGC[A/G]ACAAGAGCAAAACTC | 10987 |
rs111784922 | snp | A/C | 0.5 | 0 | intron-variant | COPS5 | GRCh38.p7 | 8:67054342 | AAATAAAAAAAATTG[A/C]GAGTTCCTCTGAAGA | 10987 |
rs111888399 | snp | A/G | 0.0872718 | 0.189788 | intron-variant | COPS5 | GRCh38.p7 | 8:67057130 | AAATATTATTGAATT[A/G]TTTTAATAACAAGAG | 10987 |
rs111927118 | snp | C/G | 0.0872718 | 0.189788 | intron-variant | COPS5 | GRCh38.p7 | 8:67059129 | ATTTCATGTAAAGGG[C/G]ATAATTTTAAGTTTA | 10987 |
rs112100373 | snp | C/G | 0.0023933 | 0.0345097 | intron-variant | COPS5 | GRCh38.p7 | 8:67044159 | GTGATTCTTGTGCCT[C/G]AGCCTCCTAAGTAGC | 10987 |
rs112195532 | snp | A/G | | | upstream-variant-2KB, intron-variant | COPS5, CSPP1 | GRCh38.p7 | 8:67063219 | CCCCGTCTCTACTAA[A/G]AAAATACAAAAAAAA | 10987 |
rs112214262 | snp | C/T | 0.0854556 | 0.188216 | intron-variant | COPS5 | GRCh38.p7 | 8:67049378 | CTGAGGCAGAAGGAT[C/T]GCTCAAGCCTGGGAA | 10987 |
rs112353634 | snp | C/T | 0.5 | 0 | missense | COPS5 | GRCh38.p7 | 8:67059384 | TGCCTCCCGATCTGG[C/T]ATGCATCACCATCTT | 10987 |
rs112430558 | snp | A/G | 0.248755 | 0.249997 | intron-variant | COPS5 | GRCh38.p7 | 8:67052752 | TTGAACCCGGGAGGC[A/G]GAGGTTGAAGTGAGC | 10987 |