SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs1054417 | snp | C/T | 0.0667028 | 0.170006 | intron-variant | SPOP | GRCh38.p7 | 17:49658654 | CTCATTGCTATCTGT[C/T]CTGCCACCGCCGATG | 8405 |
rs1061431 | snp | C/T | 0.114387 | 0.210022 | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49599620 | TTCATATTGTCTTGA[C/T]AAGAACTATGGTTCT | 8405 |
rs1230060 | snp | C/T | 0.210605 | 0.246877 | intron-variant | SPOP | GRCh38.p7 | 17:49660367 | tgtgagttagtgagg[C/T]cttccctggccattc | 8405 |
rs1230061 | snp | C/T | 0.168785 | 0.236441 | intron-variant | SPOP | GRCh38.p7 | 17:49665136 | ATAATAAGGTTCCCT[C/T]CCATTTGAAGATATC | 8405 |
rs1230062 | snp | G/T | 0.16846 | 0.236329 | intron-variant | SPOP | GRCh38.p7 | 17:49665479 | aattagccaggcgtg[G/T]tggcaggcgcctgta | 8405 |
rs1981705 | snp | C/T | 0.0498117 | 0.149749 | intron-variant | SPOP | GRCh38.p7 | 17:49621791 | AGTGAGTACCTATTA[C/T]GTGCCAGGCACTGTG | 8405 |
rs2007124 | snp | A/G | 0.0607341 | 0.163335 | intron-variant, upstream-variant-2KB | SPOP, LOC107984999 | GRCh38.p7 | 17:49619577 | TTACTCTATCGTCCA[A/G]GCTGGAGTGCAGTGG | 8405 |
rs2008752 | snp | C/T | 0.212425 | 0.24716 | intron-variant | SPOP | GRCh38.p7 | 17:49638578 | GACAGAGTGAGACTC[C/T]GTCTCAAAAAAAAAA | 8405 |
rs2008954 | snp | A/G | 0.398894 | 0.200825 | intron-variant | SPOP | GRCh38.p7 | 17:49638948 | aacctgggaggtggc[A/G]gttgtagtgagcaga | 8405 |
rs2041600 | snp | A/G | 0.0023933 | 0.0345097 | intron-variant | SPOP, LOC107984999 | GRCh38.p7 | 17:49615599 | gcacaccacaacctc[A/G]atctcctgggctcaa | 8405 |
rs2044166 | snp | C/T | 0.0111196 | 0.0737302 | intron-variant | SPOP | GRCh38.p7 | 17:49676365 | TGTGTCATCTCTTGG[C/T]TCTAACTGTAACCAT | 8405 |
rs2066747 | in-del | -/T | 0.076615 | 0.180105 | intron-variant, upstream-variant-2KB | SPOP, LOC107984999 | GRCh38.p7 | 17:49619225 | GCTATGGGTAAATGT[-/T]CTCCTCTTTGTTCAA | 8405 |
rs2286901 | snp | C/T | 0.0607341 | 0.163335 | intron-variant, nc-transcript-variant | SPOP, LOC107984999 | GRCh38.p7 | 17:49618708 | AAAAAAATCCCACAG[C/T]GAAAACTCCTGACCC | 8405 |
rs2412128 | snp | A/G | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49604081 | CTTATGGAATCTAGA[A/G]GATGAGAGGATAAAC | 8405 |
rs2537699 | snp | A/C | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49601216 | CTGCTGTTGTGAGGG[A/C]TTTTCTTCTTTGGGT | 8405 |
rs2537700 | snp | A/G | 0.179425 | 0.239831 | intron-variant | SPOP | GRCh38.p7 | 17:49610366 | TGGTATTACAGGCGC[A/G]TGCCACGATGCCCAG | 8405 |
rs2537702 | snp | A/G | 0.453453 | 0.145282 | intron-variant | SPOP | GRCh38.p7 | 17:49624333 | CACGCGCGCGCGCGC[A/G]CACACACACACACAC | 8405 |
rs2537703 | snp | A/G | 0.0663309 | 0.169604 | intron-variant | SPOP | GRCh38.p7 | 17:49627025 | CAGCTAATTTTTTGT[A/G]TTTTTAGTAGAGACA | 8405 |
rs2537704 | snp | C/G | 0 | 0 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49641811 | TGGATCACCTGAGGT[C/G]AGGAGTTTGAGACCA | 8405 |
rs2537705 | snp | A/C | | | | | GRCh38.p7 | 17:49647270 | agccgagatcacgcc[A/C]ctgcactccagcttg | 8405 |
rs2676794 | snp | C/T | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49645487 | caacatgccccatct[C/T]tactaaaaacaaaaa | 8405 |
rs2676795 | snp | C/T | 0.298144 | 0.245321 | intron-variant | SPOP | GRCh38.p7 | 17:49643653 | GTGAGCCACCACACC[C/T]GGCCTTCTTCTAGAA | 8405 |
rs2676797 | snp | C/T | 0.0123036 | 0.0774623 | intron-variant | SPOP | GRCh38.p7 | 17:49630261 | TGTGACCAAAAGGAG[C/T]CTTTTGTTTTTTCTG | 8405 |
rs2676798 | snp | C/T | 0.157311 | 0.232183 | intron-variant | SPOP | GRCh38.p7 | 17:49637910 | TCTCACTATGCTGCC[C/T]CAGCTGGAGTACAGT | 8405 |
rs2676801 | snp | A/C | 0.15665 | 0.231917 | intron-variant | SPOP, LOC107984999 | GRCh38.p7 | 17:49616324 | ATTCTCATCCTGATA[A/C]AATAAATACAGTTGT | 8405 |
rs2908433 | snp | C/T | 0.294832 | 0.245947 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49647305 | acagagtgagtgaga[C/T]gccgtcttaaaaaaa | 8405 |
rs2908434 | snp | C/T | 0.209997 | 0.246779 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49647819 | AATGACTTTTCATGC[C/T]TTAGCACCTAATCAT | 8405 |
rs2944723 | snp | A/C | 0 | 0 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49641564 | CAGTAACTCTATAGC[A/C]CAAAAAAAAAGAAAA | 8405 |
rs3034924 | in-del | -/A/AA | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49669784 | aaaaaaaaaaaaaaa[-/A/AA]TTAAGACAGCATAAA | 8405 |
rs3209120 | snp | A/C | 0.0368353 | 0.130617 | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49599514 | TAAAAAACAAACAAA[A/C]AAAAAAACACACAAA | 8405 |
rs3217104 | in-del | -/GAGA | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49611522 | TTGCCAGCAGATAGA[-/GAGA]CGACTTTTACCTAAC | 8405 |
rs3815473 | snp | G/T | 0.143622 | 0.226238 | intron-variant | SPOP | GRCh38.p7 | 17:49622949 | TATTGTTTGACCTGA[G/T]AGAGGCTGGAAATTT | 8405 |
rs3815474 | snp | A/G | 0.338976 | 0.23363 | intron-variant | SPOP | GRCh38.p7 | 17:49622953 | GTTTGACCTGATAGA[A/G]GCTGGAAATTTTGTC | 8405 |
rs3898614 | snp | A/T | 0.0189856 | 0.0955633 | intron-variant | SPOP | GRCh38.p7 | 17:49653210 | AATTGTATCTACTTT[A/T]CTTCATATATGCATT | 8405 |
rs4455012 | snp | A/G | 0.294576 | 0.245994 | intron-variant | SPOP | GRCh38.p7 | 17:49676257 | CCTAAGGGTGGGGTA[A/G]TCTTACAATAACTTC | 8405 |
rs4794059 | snp | A/G | 0.00159617 | 0.0282053 | intron-variant | SPOP | GRCh38.p7 | 17:49662498 | accagcctggctgac[A/G]tggtgaaaccccatc | 8405 |
rs5820770 | in-del | -/T | 0.254385 | 0.249962 | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49600017 | ACTCAATGTCCTTTC[-/T]TTTTTTTTTTTCCTT | 8405 |
rs5820771 | in-del | -/A | 0.338523 | 0.233803 | intron-variant | SPOP | GRCh38.p7 | 17:49638584 | GTGAGACTCTGTCTC[-/A]AAAAAAAAAAAATAG | 8405 |
rs6504617 | snp | G/T | 0.345037 | 0.231231 | intron-variant | SPOP | GRCh38.p7 | 17:49607688 | ATCAGCCTCATTTAA[G/T]AAGTCAATCTGCTTT | 8405 |
rs6504618 | snp | A/G | 0.49949 | 0.0159663 | intron-variant | SPOP | GRCh38.p7 | 17:49608827 | AAATATATAGTAGAA[A/G]GGTTTTGAGCTAACA | 8405 |
rs6504619 | snp | C/T | 0.397994 | 0.201489 | intron-variant | SPOP | GRCh38.p7 | 17:49634976 | AATTCAGTATTCCCA[C/T]GAGATACTTTTCTTC | 8405 |
rs6504620 | snp | A/T | 0.417034 | 0.18601 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49640369 | TAATACAGTTTTTTT[A/T]AAAAAAAAGACAATT | 8405 |
rs6504621 | snp | C/T | 0.486464 | 0.0811471 | intron-variant | SPOP | GRCh38.p7 | 17:49650737 | CTAATACTAAATTTT[C/T]CCAGAGTAAAAGACT | 8405 |
rs7210062 | snp | A/C | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49607408 | ATGAGAAACATTCCA[A/C]CAGAACAAAATCCCT | 8405 |
rs7210870 | snp | A/G | 0.338976 | 0.23363 | intron-variant | SPOP | GRCh38.p7 | 17:49661680 | GTATTTGTTAAAAAG[A/G]AAAGTCAGTTAACAC | 8405 |
rs7211112 | snp | C/G | 0.424037 | 0.179474 | intron-variant | SPOP | GRCh38.p7 | 17:49662162 | CCTTTTCTAGAAAGG[C/G]AGGACCTGCCCAAAT | 8405 |
rs7212036 | snp | C/T | 0.487432 | 0.0782705 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49641108 | tctctactaaaaaca[C/T]aaaaatcagctgggc | 8405 |
rs7215681 | snp | G/T | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49662123 | TAGAATGGAGAATTC[G/T]CAGTATGAACTTTCT | 8405 |
rs7216142 | snp | G/T | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49662389 | TCTGCTGTTAGAAAA[G/T]GGTAATTCCAggcca | 8405 |
rs7217696 | snp | C/T | 0.114036 | 0.209795 | intron-variant | SPOP | GRCh38.p7 | 17:49650110 | tggtcagactggtct[C/T]gaactcccaacctca | 8405 |
rs7219984 | snp | A/G | 0.338069 | 0.233974 | intron-variant, upstream-variant-2KB | SPOP, LOC107984999 | GRCh38.p7 | 17:49619458 | AAATCAGACTCAAGA[A/G]AGGGAGATGTTTAAA | 8405 |
rs7220846 | snp | G/T | 0.0185938 | 0.0946107 | intron-variant | SPOP | GRCh38.p7 | 17:49605544 | catatacaacaatta[G/T]ctgggtgtggtggtg | 8405 |
rs7221354 | snp | C/T | 0.338296 | 0.233889 | intron-variant, upstream-variant-2KB | SPOP, LOC107984999 | GRCh38.p7 | 17:49619571 | atggtcttactctat[C/T]gtccaggctggagtg | 8405 |
rs7342821 | snp | A/G | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49621183 | CCAGGGATTGGTTCA[A/G]GGAATGCAAACGTAA | 8405 |
rs8067844 | snp | G/T | 0.199873 | 0.244923 | upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49678379 | GAGGACCAAATAGAG[G/T]CGTAACAAGCCAAGG | 8405 |
rs8068851 | snp | A/G/T | 0.0209708 | 0.10044 | intron-variant | SPOP | GRCh38.p7 | 17:49635658 | ttttttttttgagac[A/G/T]gagtcttgttctgtt | 8405 |
rs8072037 | snp | C/G | 0.338976 | 0.23363 | intron-variant | SPOP | GRCh38.p7 | 17:49626080 | TTATAATATACAAGG[C/G]AGAAATTTCCTGAAC | 8405 |
rs8079577 | snp | A/G | 0.409891 | 0.192184 | intron-variant | SPOP | GRCh38.p7 | 17:49660740 | gaggccgagacaggc[A/G]gatcacgaggtcagg | 8405 |
rs9889985 | snp | A/G | | | intron-variant | SPOP | GRCh38.p7 | 17:49668871 | aagctccacctccca[A/G]gttcccgccattctc | 8405 |
rs9891224 | snp | C/G | 0.295599 | 0.245806 | intron-variant | SPOP | GRCh38.p7 | 17:49675458 | gatatacTGTCTCGG[C/G]ATGAATAAACAAGAC | 8405 |
rs9892142 | snp | A/G | | | intron-variant | SPOP | GRCh38.p7 | 17:49661519 | GTAACCTTCACGAAG[A/G]CAGTCCTGAATCTCA | 8405 |
rs9899342 | snp | C/T | | | intron-variant | SPOP | GRCh38.p7 | 17:49609073 | accaccacgcctggc[C/T]aatttttgtattttt | 8405 |
rs9900392 | snp | A/C | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49602463 | AAAGAATTGGTGTCT[A/C]CCCTGTGAAATCCCT | 8405 |
rs9903013 | snp | C/G | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49660104 | agaaaaagttcccca[C/G]gtgattctaacaaac | 8405 |
rs9909054 | snp | A/G | 0.0166325 | 0.0896639 | intron-variant | SPOP | GRCh38.p7 | 17:49651880 | aaaaattagccaggc[A/G]tggtggcgggcgcct | 8405 |
rs9911752 | snp | A/G | 0.0166325 | 0.0896639 | intron-variant | SPOP | GRCh38.p7 | 17:49674745 | TACAGAATACTAACA[A/G]AGAAACTAGCATCTA | 8405 |
rs10438783 | snp | C/T | 0.0260105 | 0.111035 | intron-variant | SPOP, LOC107984999 | GRCh38.p7 | 17:49614450 | tatattattcagaca[C/T]acaAATAATAAACAA | 8405 |
rs10514970 | snp | C/T | 0.143622 | 0.226238 | intron-variant | SPOP | GRCh38.p7 | 17:49611164 | AGATATATTTAGCTG[C/T]AGTTTGTTTTGTAGT | 8405 |
rs10514971 | snp | C/T | 0.207253 | 0.246318 | intron-variant | SPOP | GRCh38.p7 | 17:49661184 | ATTTGTGAAAGCACA[C/T]CCTAATCATGTTATT | 8405 |
rs10557562 | in-del | -/G | | | intron-variant | SPOP | GRCh38.p7 | 17:49645875 | CTCCAACCTGTTGTT[-/G]TTTTTTTTTCCTTCC | 8405 |
rs10571619 | in-del | -/TGT | 0.416708 | 0.186302 | intron-variant | SPOP | GRCh38.p7 | 17:49645868 | TTCCCATCTCCAACC[-/TGT]TGTTGTTTTTTTTTC | 8405 |
rs10625408 | in-del | -/TTTCT | 0.301681 | 0.2446 | intron-variant | SPOP | GRCh38.p7 | 17:49630607 | TGTTTTTTTGTTTTC[-/TTTCT]TTTAAATTTTTTTTA | 8405 |
rs10633344 | in-del | -/A | | | intron-variant | SPOP | GRCh38.p7 | 17:49669764 | CAAGACTCTGCCTCA[-/A]AAAAAAAAAAAAAAA | 8405 |
rs10655898 | in-del | -/CTTTT | | | intron-variant | SPOP | GRCh38.p7 | 17:49630610 | TTTTTTGTTTTCTTT[-/CTTTT]AAATTTTTTTTAAAA | 8405 |
rs10853111 | snp | A/G | 0.404035 | 0.196909 | intron-variant, upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49640826 | TGATTCCTCAGAATA[A/G]GCCCATTCCTGCCTT | 8405 |
rs11079873 | snp | C/T | 0.488057 | 0.0763479 | intron-variant | SPOP, LOC107984999 | GRCh38.p7 | 17:49617610 | AAAGTTTTCTAATCA[C/T]TTGCAACTACTCTGT | 8405 |
rs11307294 | in-del | -/A | | | intron-variant | SPOP | GRCh38.p7 | 17:49662014 | GTGAAACTCCGTCTC[-/A]AAAAAAAAAAAAAAA | 8405 |
rs11316512 | in-del | -/G | 0.398174 | 0.201356 | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49599518 | TGTGTTTTTTTTTTT[-/G]TTTGTTTTTTAGAAA | 8405 |
rs11372331 | in-del | -/T | | | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49599518 | GTGTTTTTTTTTTTG[-/T]TTTGTTTTTTAGAAA | 8405 |
rs11451249 | in-del | -/T | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49635652 | TTTTTTTTTTTTTTT[-/T]GAGACGGAGTCTTGT | 8405 |
rs11539921 | snp | A/G | 0.0543475 | 0.155628 | utr-variant-3-prime | SPOP | GRCh38.p7 | 17:49599829 | TACCACCATACAAGC[A/G]TCAGAAGAGCTCTCT | 8405 |
rs11656857 | snp | A/C | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49650686 | GCAATTTTAACAAAT[A/C]CCTTATACAGTGATA | 8405 |
rs11656908 | snp | A/T | 0.00479614 | 0.0487346 | intron-variant | SPOP | GRCh38.p7 | 17:49658071 | TTGGCCAAATAAAGT[A/T]TGATTAATCCATAAA | 8405 |
rs11868293 | snp | A/T | 0.211819 | 0.247067 | intron-variant | SPOP | GRCh38.p7 | 17:49665699 | acacacacacacCAA[A/T]CTggccaggtgcgat | 8405 |
rs11870879 | snp | C/T | 0.448708 | 0.151707 | intron-variant | SPOP | GRCh38.p7 | 17:49670286 | AAATAAAAGCAGCTA[C/T]TAGGTCTTATTGGCA | 8405 |
rs12150193 | snp | C/G | 0 | 0 | intron-variant | SPOP | GRCh38.p7 | 17:49663677 | aaagcacttgtgact[C/G]tgagttgtgagttga | 8405 |
rs12150673 | snp | C/G | | | upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49678925 | aaatacaaaaaatta[C/G]ccgggcgcagtggcg | 8405 |
rs12326029 | snp | G/T | 0.0166325 | 0.0896639 | intron-variant | SPOP | GRCh38.p7 | 17:49664337 | aagcagatatgaaaa[G/T]ctagctgccttccat | 8405 |
rs12449817 | snp | C/T | 0.206336 | 0.246157 | intron-variant | SPOP | GRCh38.p7 | 17:49604967 | GTAACATTAATATGC[C/T]ACATGTTCTGAGAAA | 8405 |
rs12450870 | snp | C/T | 0.200182 | 0.244986 | intron-variant | SPOP | GRCh38.p7 | 17:49676837 | TCACTGAAATACTAT[C/T]GTACTTCAAAGTTCG | 8405 |
rs12451482 | snp | C/T | 0.482459 | 0.0919928 | intron-variant | SPOP | GRCh38.p7 | 17:49642736 | TTTAAGATAGGAACA[C/T]TTCTCTGTAGCATAA | 8405 |
rs12937005 | snp | A/T | 0.206947 | 0.246265 | upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49678665 | GGAAGCTGACCACGC[A/T]TGGTGGCTGACGCCT | 8405 |
rs12937072 | snp | A/C | 0.150667 | 0.229419 | intron-variant | SPOP | GRCh38.p7 | 17:49652644 | AAGCCATTTAGAAGT[A/C]ACCAAAACTATACCC | 8405 |
rs12943384 | snp | G/T | 0.133093 | 0.220981 | intron-variant | SPOP | GRCh38.p7 | 17:49627776 | CCATTTTTTCCCACC[G/T]TTTTTTGCTTCTGAC | 8405 |
rs16948287 | snp | G/T | 0.0584853 | 0.160693 | intron-variant | SPOP | GRCh38.p7 | 17:49604216 | CTACTTTCCCAGAGC[G/T]TGCAGTGAATATTTT | 8405 |
rs16948289 | snp | C/T | 0.258565 | 0.249853 | intron-variant | SPOP | GRCh38.p7 | 17:49604258 | CATTAAAAGCAAGTT[C/T]CCCCTGGTCAGAATT | 8405 |
rs16948298 | snp | A/C | 0.259951 | 0.249802 | intron-variant | SPOP | GRCh38.p7 | 17:49627903 | GCTCTTAACCAAACA[A/C]CCTGCTGGAAAGGAA | 8405 |
rs17523324 | in-del | -/AGGGA | | | upstream-variant-2KB | SPOP | GRCh38.p7 | 17:49678189 | GGAGCAGGGAAACCC[-/AGGGA]GGGGAGGGGAGGAGA | 8405 |
rs17644409 | snp | C/G | 0.0623717 | 0.165214 | intron-variant | SPOP | GRCh38.p7 | 17:49607838 | TCTGACTCTAGATAC[C/G]TGGCTAAACAGACAT | 8405 |
rs17645084 | snp | A/G | 0.207559 | 0.246371 | intron-variant | SPOP | GRCh38.p7 | 17:49675567 | TGAATTTTGTTTCAT[A/G]TGTATGTACATGTGT | 8405 |