OPTN
Disease associated variation - ClinVar
Allele IDTypeNameRS#dbSNPPhenotype IDsChromosomeStartStopReferenceAlternate
22135single nucleotide variantNM_001008211.1(OPTN):c.148G>A (p.Glu50Lys)28939688MedGen:C1842026101315127013151270GA
22135single nucleotide variantNM_001008211.1(OPTN):c.148G>A (p.Glu50Lys)28939688MedGen:C1842026101310927013109270GA
22136insertionOPTN, 2-BP INS, 691AG-1MedGen:C1842026na-1-1nana
22137single nucleotide variantNM_001008211.1(OPTN):c.1634G>A (p.Arg545Gln)75654767MedGen:CN239196;MedGen:C1842026;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317876613178766GA
22137single nucleotide variantNM_001008211.1(OPTN):c.1634G>A (p.Arg545Gln)75654767MedGen:CN239196;MedGen:C1842026;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313676613136766GA
22138single nucleotide variantNM_001008211.1(OPTN):c.293T>A (p.Met98Lys)11258194MedGen:CN239196;MedGen:C1842026;MedGen:C1847730,OMIM:606657;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315240013152400TA
22138single nucleotide variantNM_001008211.1(OPTN):c.293T>A (p.Met98Lys)11258194MedGen:CN239196;MedGen:C1842026;MedGen:C1847730,OMIM:606657;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101311040013110400TA
22139deletionOPTN, EX5DEL-1MedGen:C3150692,OMIM:613435na-1-1nana
22140single nucleotide variantNM_001008211.1(OPTN):c.1192C>T (p.Gln398Ter)267606928MedGen:C3150692,OMIM:613435101316798913167989CT
22140single nucleotide variantNM_001008211.1(OPTN):c.1192C>T (p.Gln398Ter)267606928MedGen:C3150692,OMIM:613435101312598913125989CT
22141single nucleotide variantNM_001008211.1(OPTN):c.1433A>G (p.Glu478Gly)267606929MedGen:C3150692,OMIM:613435101317409813174098AG
22141single nucleotide variantNM_001008211.1(OPTN):c.1433A>G (p.Glu478Gly)267606929MedGen:C3150692,OMIM:613435101313209813132098AG
101916single nucleotide variantNM_001008211.1(OPTN):c.102G>A (p.Thr34=)2234968MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315122413151224GA
101916single nucleotide variantNM_001008211.1(OPTN):c.102G>A (p.Thr34=)2234968MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101310922413109224GA
101917single nucleotide variantNM_021980.4(OPTN):c.123G>A (p.Leu41=)11591687MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315124513151245GA
101917single nucleotide variantNM_021980.4(OPTN):c.123G>A (p.Leu41=)11591687MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101310924513109245GA
189069deletionNM_001008211.1(OPTN):c.917_921delTGACA (p.Thr307Serfs)786205611MedGen:CN221809101316602913166033TGACA-
189069deletionNM_001008211.1(OPTN):c.917_921delTGACA (p.Thr307Serfs)786205611MedGen:CN221809101312402913124033TGACA-
195007single nucleotide variantNM_001008211.1(OPTN):c.553-5C>T2244380MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315826213158262CT
195007single nucleotide variantNM_001008211.1(OPTN):c.553-5C>T2244380MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101311626213116262CT
253707single nucleotide variantNM_001008211.1(OPTN):c.370-14C>G886038367MedGen:CN169374101311243913112439CG
253707single nucleotide variantNM_001008211.1(OPTN):c.370-14C>G886038367MedGen:CN169374101315443913154439CG
253708single nucleotide variantNM_001008211.1(OPTN):c.489A>G (p.Glu163=)113811959MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101311257213112572AG
253708single nucleotide variantNM_001008211.1(OPTN):c.489A>G (p.Glu163=)113811959MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315457213154572AG
253709single nucleotide variantNM_001008211.1(OPTN):c.553-10G>A11258210MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101311625713116257GA
253709single nucleotide variantNM_001008211.1(OPTN):c.553-10G>A11258210MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573;MedGen:CN169374101315825713158257GA
253710single nucleotide variantNM_001008211.1(OPTN):c.626+24G>A11258211MedGen:CN169374101315836413158364GA
253710single nucleotide variantNM_001008211.1(OPTN):c.626+24G>A11258211MedGen:CN169374101311636413116364GA
253711single nucleotide variantNM_001008211.1(OPTN):c.1324C>T (p.Leu442=)367641761MedGen:CN169374101312782613127826CT
253711single nucleotide variantNM_001008211.1(OPTN):c.1324C>T (p.Leu442=)367641761MedGen:CN169374101316982613169826CT
253712single nucleotide variantNM_001008211.1(OPTN):c.1613-48C>A10906310MedGen:CN169374101317869713178697CA
253712single nucleotide variantNM_001008211.1(OPTN):c.1613-48C>A10906310MedGen:CN169374101313669713136697CA
309724single nucleotide variantNM_021980.4(OPTN):c.-120G>T886046817MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310019413100194GT
309724single nucleotide variantNM_021980.4(OPTN):c.-120G>T886046817MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314219413142194GT
309725single nucleotide variantNM_021980.4(OPTN):c.-103C>G2580915MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310021113100211CG
309725single nucleotide variantNM_021980.4(OPTN):c.-103C>G2580915MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314221113142211CG
309726single nucleotide variantNM_021980.4(OPTN):c.-12+13A>G556917167MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310031513100315AG
309726single nucleotide variantNM_021980.4(OPTN):c.-12+13A>G556917167MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314231513142315AG
309727single nucleotide variantNM_021980.4(OPTN):c.447G>A (p.Arg149=)555741399MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311253013112530GA
309727single nucleotide variantNM_021980.4(OPTN):c.447G>A (p.Arg149=)555741399MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315453013154530GA
309732single nucleotide variantNM_021980.4(OPTN):c.1427A>G (p.His476Arg)886046821MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313209213132092AG
309732single nucleotide variantNM_021980.4(OPTN):c.1427A>G (p.His476Arg)886046821MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317409213174092AG
309734single nucleotide variantNM_021980.4(OPTN):c.*269C>T111484304MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317913513179135CT
309734single nucleotide variantNM_021980.4(OPTN):c.*269C>T111484304MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313713513137135CT
309739single nucleotide variantNM_021980.4(OPTN):c.*1042T>G886046827MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313790813137908TG
309739single nucleotide variantNM_021980.4(OPTN):c.*1042T>G886046827MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317990813179908TG
309743single nucleotide variantNM_021980.4(OPTN):c.*1285T>C560947786MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313815113138151TC
309743single nucleotide variantNM_021980.4(OPTN):c.*1285T>C560947786MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101318015113180151TC
314575single nucleotide variantNM_021980.4(OPTN):c.-227G>T3814657MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310008713100087GT
314575single nucleotide variantNM_021980.4(OPTN):c.-227G>T3814657MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314208713142087GT
314577single nucleotide variantNM_021980.4(OPTN):c.-161T>C71492279MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310015313100153TC
314577single nucleotide variantNM_021980.4(OPTN):c.-161T>C71492279MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314215313142153TC
314579single nucleotide variantNM_021980.4(OPTN):c.-122C>A552494483MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310019213100192CA
314579single nucleotide variantNM_021980.4(OPTN):c.-122C>A552494483MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314219213142192CA
314580single nucleotide variantNM_021980.4(OPTN):c.-63G>A11548142MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310025113100251GA
314580single nucleotide variantNM_021980.4(OPTN):c.-63G>A11548142MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314225113142251GA
314581single nucleotide variantNM_021980.4(OPTN):c.444G>A (p.Val148=)780011442MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311252713112527GA
314581single nucleotide variantNM_021980.4(OPTN):c.444G>A (p.Val148=)780011442MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315452713154527GA
314594single nucleotide variantNM_021980.4(OPTN):c.961A>T (p.Ser321Cys)886046820MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101312407313124073AT
314594single nucleotide variantNM_021980.4(OPTN):c.961A>T (p.Ser321Cys)886046820MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101316607313166073AT
314616single nucleotide variantNM_021980.4(OPTN):c.1243-13G>A374144660MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101312773213127732GA
314616single nucleotide variantNM_021980.4(OPTN):c.1243-13G>A374144660MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101316973213169732GA
314619deletionNM_021980.4(OPTN):c.1532+16_1532+17delAG886046822MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313221313132214AG-
314619deletionNM_021980.4(OPTN):c.1532+16_1532+17delAG886046822MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317421313174214AG-
314621single nucleotide variantNM_021980.4(OPTN):c.*152G>T886046823MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317901813179018GT
314621single nucleotide variantNM_021980.4(OPTN):c.*152G>T886046823MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313701813137018GT
314622single nucleotide variantNM_021980.4(OPTN):c.*306G>A538280633MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313717213137172GA
314622single nucleotide variantNM_021980.4(OPTN):c.*306G>A538280633MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317917213179172GA
314630single nucleotide variantNM_021980.4(OPTN):c.*461G>A541250740MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313732713137327GA
314630single nucleotide variantNM_021980.4(OPTN):c.*461G>A541250740MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317932713179327GA
320644single nucleotide variantNM_021980.4(OPTN):c.-232G>T886046816MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310008213100082GT
320644single nucleotide variantNM_021980.4(OPTN):c.-232G>T886046816MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314208213142082GT
320645single nucleotide variantNM_021980.4(OPTN):c.402C>A (p.Ala134=)113955718MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311248513112485CA
320645single nucleotide variantNM_021980.4(OPTN):c.402C>A (p.Ala134=)113955718MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315448513154485CA
320651single nucleotide variantNM_021980.4(OPTN):c.573A>G (p.Ser191=)773095721MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311628713116287AG
320651single nucleotide variantNM_021980.4(OPTN):c.573A>G (p.Ser191=)773095721MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315828713158287AG
320654single nucleotide variantNM_021980.4(OPTN):c.*218G>C886046824MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317908413179084GC
320654single nucleotide variantNM_021980.4(OPTN):c.*218G>C886046824MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313708413137084GC
320655single nucleotide variantNM_021980.4(OPTN):c.*386C>A745564491MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313725213137252CA
320655single nucleotide variantNM_021980.4(OPTN):c.*386C>A745564491MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317925213179252CA
320656single nucleotide variantNM_021980.4(OPTN):c.*413G>A886046825MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313727913137279GA
320656single nucleotide variantNM_021980.4(OPTN):c.*413G>A886046825MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317927913179279GA
320657single nucleotide variantNM_021980.4(OPTN):c.*562T>G148646641MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313742813137428TG
320657single nucleotide variantNM_021980.4(OPTN):c.*562T>G148646641MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317942813179428TG
320658single nucleotide variantNM_021980.4(OPTN):c.*1063C>A530046832MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313792913137929CA
320658single nucleotide variantNM_021980.4(OPTN):c.*1063C>A530046832MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317992913179929CA
320662single nucleotide variantNM_021980.4(OPTN):c.*1251C>G542617940MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313811713138117CG
320662single nucleotide variantNM_021980.4(OPTN):c.*1251C>G542617940MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101318011713180117CG
321180single nucleotide variantNM_021980.4(OPTN):c.-98C>A886046818MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310021613100216CA
321180single nucleotide variantNM_021980.4(OPTN):c.-98C>A886046818MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314221613142216CA
321188single nucleotide variantNM_021980.4(OPTN):c.247C>T (p.Arg83Cys)756622651MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311035413110354CT
321188single nucleotide variantNM_021980.4(OPTN):c.247C>T (p.Arg83Cys)756622651MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315235413152354CT
321189single nucleotide variantNM_021980.4(OPTN):c.425A>C (p.Gln142Pro)757411888MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311250813112508AC
321189single nucleotide variantNM_021980.4(OPTN):c.425A>C (p.Gln142Pro)757411888MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315450813154508AC
321201single nucleotide variantNM_021980.4(OPTN):c.441G>A (p.Val147=)886046819MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311252413112524GA
321201single nucleotide variantNM_021980.4(OPTN):c.441G>A (p.Val147=)886046819MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101315452413154524GA
321211single nucleotide variantNM_021980.4(OPTN):c.627-10T>C80327830MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101311887813118878TC
321211single nucleotide variantNM_021980.4(OPTN):c.627-10T>C80327830MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101316087813160878TC
321213single nucleotide variantNM_021980.4(OPTN):c.963C>T (p.Ser321=)150381274MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101312407513124075CT
321213single nucleotide variantNM_021980.4(OPTN):c.963C>T (p.Ser321=)150381274MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101316607513166075CT
321216single nucleotide variantNM_021980.4(OPTN):c.1569G>A (p.Ala523=)771316696MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317553813175538GA
321216single nucleotide variantNM_021980.4(OPTN):c.1569G>A (p.Ala523=)771316696MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313353813133538GA
321224single nucleotide variantNM_021980.4(OPTN):c.1612+10G>A191671333MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317559113175591GA
321224single nucleotide variantNM_021980.4(OPTN):c.1612+10G>A191671333MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313359113133591GA
321225single nucleotide variantNM_021980.4(OPTN):c.*938C>G886046826MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313780413137804CG
321225single nucleotide variantNM_021980.4(OPTN):c.*938C>G886046826MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317980413179804CG
321235single nucleotide variantNM_021980.4(OPTN):c.*1089G>A758812707MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313795513137955GA
321235single nucleotide variantNM_021980.4(OPTN):c.*1089G>A758812707MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101317995513179955GA
321239single nucleotide variantNM_021980.4(OPTN):c.*1385T>C546352206MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313825113138251TC
321239single nucleotide variantNM_021980.4(OPTN):c.*1385T>C546352206MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101318025113180251TC
353123single nucleotide variantNM_001008211.1(OPTN):c.-454C>T570587258MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101314208113142081CT
353123single nucleotide variantNM_001008211.1(OPTN):c.-454C>T570587258MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101310008113100081CT
353124single nucleotide variantNM_001008211.1(OPTN):c.*1421T>G12415716MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101318028713180287TG
353124single nucleotide variantNM_001008211.1(OPTN):c.*1421T>G12415716MedGen:CN239196;MedGen:C0339573,OMIM:137760,SNOMED CT:C0339573101313828713138287TG
Disease associated variation - GWASdb
ChrPosSNP ID(dbSNP 142)RefAltOri SNP IDP-valueDrug NameDrug AnnoGWAS TraitHPO IDDO IDAATypeTrait or Drug
1013145649rs11258186AGrs112581863.49E-04Multiple complex diseasesHPOID:0000118NAAintronGWASdb_trait
1013152666rs7921853TGrs79218534.78E-05Paget's diseaseHPOID:0000924DOID:5408TintronGWASdb_trait
1013155726rs1561570TCrs15615706.00E-13Paget's diseaseHPOID:0000924DOID:5408TintronGWASdb_trait
1013155726rs1561570TCrs15615704.00E-38Paget's diseaseHPOID:0000924DOID:5408TintronGWASdb_trait
1013169374rs825411AGrs8254117.82E-08Paget's diseaseHPOID:0000924DOID:5408T,CintronGWASdb_trait
Disease associated variation - OMIM
Ensembl_gene_ID Approved Gene Symbol MIM Number
ENSG00000123240.16 OPTN 602432