iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs9988	snp	C/T	0.24081	0.249831	synonymous-codon, intron-variant, nc-transcript-variant	NUP85, GGA3	GRCh38.p7	17:75234761	GACTCTGCTGACAGA[C/T]GCCTTGCCCCTTTTG	23163
rs899318	snp	C/T	0.012271	0.0773652	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232006	CTGCTCCCAGCCTAC[C/T]GTCTGTGGGACGCAG	23163
rs899319	snp	C/T	0.209084	0.246629	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232141	GAGATGGGATAATTA[C/T]TTGGGAGGGACAGGA	23163
rs936541	snp	A/C	0.296364	0.245663	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232609	GAGCAACGTTTTGCT[A/C]CCCTTGAAGCCACAC	23163
rs963547	snp	C/T	0.273587	0.248885	intron-variant	GGA3	GRCh38.p7	17:75246076	CCTCAGCCATCAGTG[C/T]GACACCTTCGCTAGT	23163
rs963548	snp	C/G	0.28052	0.24813	intron-variant	GGA3	GRCh38.p7	17:75246344	GGCACAATGCACACA[C/G]ATTTGTGGAACAGCT	23163
rs1005713	snp	G/T	0.172351	0.237636	intron-variant, downstream-variant-500B	NUP85, GGA3	GRCh38.p7	17:75228700	AAGAAAGAAACCTTT[G/T]TTCTAATGCCTTTAA	23163
rs1005714	snp	C/G	0.350982	0.228698	intron-variant, downstream-variant-500B	NUP85, GGA3	GRCh38.p7	17:75228544	AACCTTTCCCCAGAG[C/G]CAGGAGGGCACACTT	23163
rs1007667	snp	A/G	0.0028448	0.0376073	intron-variant	NUP85, GGA3	GRCh38.p7	17:75231687	GCTCCAATGGCACCC[A/G]CATGCTGAAGAGCAC	23163
rs1051471	snp	C/T	0	0	missense	GGA3	GRCh38.p7	17:75240953	CCTACTCCACCCTCC[C/T]CAGGCATCCCAATCC	23163
rs1471454	snp	A/C	0.235854	0.249599	intron-variant	GGA3	GRCh38.p7	17:75249939	TCTCACTTTCTTCCA[A/C]CTTGATAGACCTTTT	23163
rs1473428	snp	C/T	0.290718	0.246662	intron-variant	GGA3	GRCh38.p7	17:75249322	TGCTGGGATTACAGG[C/T]GGGAGCCACCGCACC	23163
rs1478785	snp	A/G	0.338905	0.233658	intron-variant, utr-variant-3-prime	NUP85, GGA3	GRCh38.p7	17:75226770	TTAAAATAACATCGC[A/G]GGAAACTACTTTGAC	23163
rs1551967	snp	C/T	0.00187161	0.0305336	intron-variant, missense	NUP85, GGA3	GRCh38.p7	17:75226752	CATTTCAGGGATGTT[C/T]ATTTAAAATAACATC	23163
rs1967385	snp	A/G	0.417196	0.185864	intron-variant	GGA3	GRCh38.p7	17:75251125	TTACAAACAAGCAGA[A/G]GCAAGAACATGGGCT	23163
rs1973186	snp	A/G	0.230896	0.249269	intron-variant	NUP85, GGA3	GRCh38.p7	17:75230105	ctggagtgcagtggc[A/G]cgatctcagctcact	23163
rs1973187	snp	A/G	0.242201	0.249878	intron-variant	NUP85, GGA3	GRCh38.p7	17:75230124	tctcagctcactgca[A/G]cctctgcctcctggg	23163
rs1985808	snp	A/G	0.372794	0.217765	intron-variant	GGA3	GRCh38.p7	17:75242127	ACTTGTCCAGGGTGT[A/G]AGGGCCAGATGGAAA	23163
rs2035251	snp	A/G	0.221439	0.248363	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232472	ACGACCATTTCTGAA[A/G]GCATATGGTATTCAC	23163
rs2242228	snp	A/G	0.28052	0.24813	intron-variant	GGA3	GRCh38.p7	17:75241226	AAAGCAGGTGGGGAA[A/G]TTCCTACCCACATCT	23163
rs2242229	snp	G/T	0.203575	0.245652	intron-variant	GGA3	GRCh38.p7	17:75246420	TGTTGGCTTTTGGCA[G/T]GAGCCCTAAGAACCG	23163
rs2242230	snp	A/G	0.316004	0.24113	intron-variant	GGA3	GRCh38.p7	17:75246814	TGCAACACAACAAAG[A/G]AGAGGACAAGTGTTA	23163
rs2242231	snp	A/G	0.401924	0.198543	intron-variant	GGA3	GRCh38.p7	17:75246854	ATGAGGATGCAATGG[A/G]AGGTTTTCTTCGCAA	23163
rs2279161	snp	C/T	0.276267	0.248616	intron-variant, upstream-variant-2KB, utr-variant-5-prime	GGA3, MRPS7	GRCh38.p7	17:75261749	TTTCCTTTTGGCGCT[C/T]CCCTTTGGACCCCGG	23163
rs2279162	snp	C/T	0.498084	0.0308911	upstream-variant-2KB, intron-variant	GGA3, MRPS7	GRCh38.p7	17:75263002	TTCCCTGCATGTGTA[C/T]GGGCTTTAATGAAGC	23163
rs2291029	snp	C/T	0.0844981	0.187374	synonymous-codon, utr-variant-5-prime, downstream-variant-500B, nc-transcript-variant	NUP85, GGA3	GRCh38.p7	17:75225344	GTCTCTCCCTTAGCC[C/T]GGGAACACCCAGACA	23163
rs2291030	snp	C/T	0.19646	0.2442	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232049	CCTGAGGTCACACTT[C/T]ATGCCTACCCCAGCC	23163
rs2291031	snp	C/T	0.202959	0.245534	intron-variant	NUP85, GGA3	GRCh38.p7	17:75232078	CCATCCTCCTCCTCA[C/T]GAGCCACACTGGAGA	23163
rs2291032	snp	A/G	0.07404	0.177597	intron-variant	NUP85, GGA3	GRCh38.p7	17:75234868	CTGTTGCCGATGTGC[A/G]TGTTTCCTCCTTTGT	23163
rs2306215	snp	C/G	0.28052	0.24813	intron-variant	GGA3	GRCh38.p7	17:75244420	TCAGATTTGGGCTGA[C/G]GGCGCTTCAGAAAAA	23163
rs2306216	snp	A/G	0.239051	0.24976	intron-variant	GGA3	GRCh38.p7	17:75244478	CATCCCGTTACCTCC[A/G]GGGCCTAGCTCTCTA	23163
rs2971915	snp	C/G			intron-variant	GGA3	GRCh38.p7	17:75255715	atttggttgataagg[C/G]atagatccagaacta	23163
rs3082648	in-del	-/AA/AAA	0.496175	0.0435625	intron-variant	NUP85, GGA3	GRCh38.p7	17:75230044	aaaaaaaaaaaaaaa[-/AA/AAA]TTttgtacaccttaa	23163
rs3178020	snp	C/T	0.0171926	0.0911082	synonymous-codon	GGA3	GRCh38.p7	17:75238747	TCAATGAAAGTGAAG[C/T]TGCAGCCACCTTCTG	23163
rs3179880	snp	A/C			utr-variant-3-prime, intron-variant	GGA3	GRCh38.p7	17:75237678	CGTCCTGGAATGGCC[A/C]CGGAGTGATGAGTTG	23163
rs3214915	in-del	-/TA	0.073852	0.177403	intron-variant	NUP85, GGA3	GRCh38.p7	17:75234842	GTCCCTGCTAGAGCT[-/TA]GTTGTATAGCTGTTG	23163
rs3214916	in-del	-/T			upstream-variant-2KB, intron-variant	GGA3, MRPS7	GRCh38.p7	17:75263070	GAAGTAAACACACAA[-/T]TTAAAAAAAAAGGAA	23163
rs3760203	snp	C/G	0.281049	0.248064	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260266	AACTTGCTATAACCA[C/G]AGTGGAATTAGTTTG	23163
rs3760204	snp	A/G	0.404733	0.196361	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260224	TTAATATGGGTATTG[A/G]ATAATTTAAATGACC	23163
rs3760205	snp	C/T	0.0123036	0.0774623	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260104	TGGAGTGCAGGGGTG[C/T]GATCATAGCTCACTG	23163
rs3760206	snp	C/T	0.281841	0.247964	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260010	AGGCACACGCCACCA[C/T]GCTTGGCTAATTCTT	23163
rs3826325	snp	C/T	0.281841	0.247964	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75259888	CGCTGGGATTACACA[C/T]GTGAGCTACCGCACC	23163
rs3826326	snp	C/T	0.315758	0.241197	intron-variant	GGA3	GRCh38.p7	17:75259230	GATGAAGAACTCTCC[C/T]GTAATCCCAGCACGT	23163
rs3835130	in-del	-/AGTCCAG			utr-variant-3-prime, intron-variant	GGA3	GRCh38.p7	17:75237941	CACCCCCCACCCCAG[-/AGTCCAG]TGGCTTCAGTGAATG	23163
rs3841603	in-del	-/T	0.239054	0.24976	utr-variant-3-prime, intron-variant, downstream-variant-500B, nc-transcript-variant	NUP85, GGA3	GRCh38.p7	17:75235723	GGCAATGTATATAGA[-/T]TTTTTTAAAAGAATA	23163
rs4312342	snp	C/G	0.111224	0.207945	intron-variant	GGA3	GRCh38.p7	17:75255297	ctcttttaagcactc[C/G]tttttagttatcccc	23163
rs4423890	snp	C/T	0.497449	0.0356231	intron-variant	GGA3	GRCh38.p7	17:75255549	GATATTGGCGTTGAG[C/T]GGGGTAAGGGTGATT	23163
rs4486943	snp	A/G	0.0670814	0.170414	intron-variant	NUP85, GGA3	GRCh38.p7	17:75231666	CCATGGGTGTGGGCT[A/G]TGCGGGTGCTCTTCA	23163
rs4788874	snp	A/G	0.129856	0.219239	intron-variant	NUP85, GGA3	GRCh38.p7	17:75235543	AAAGGGCTCCTTCCT[A/G]CTCTTAGCTCATGCT	23163
rs4788875	snp	C/G	0.408017	0.193729	intron-variant	GGA3	GRCh38.p7	17:75254915	tcctcctaagcgagt[C/G]ccatctgtgtgggac	23163
rs4788878	snp	A/G	0.254105	0.249966	upstream-variant-2KB, intron-variant	GGA3, MRPS7	GRCh38.p7	17:75264217	TGTTACGGTCCACTC[A/G]TCTGAGTCCTGTAGC	23163
rs4789154	snp	C/T	0.229429	0.249152	intron-variant	NUP85, GGA3	GRCh38.p7	17:75230382	tttttttttttgaga[C/T]ggagtctcactttgt	23163
rs4789156	snp	C/T	0.0116844	0.0755359	intron-variant	GGA3	GRCh38.p7	17:75244755	CGCTCAGTGAGGGCG[C/T]GCTCGGGGCTGGAAC	23163
rs4789157	snp	C/T	0.203575	0.245652	intron-variant	GGA3	GRCh38.p7	17:75247226	GAAACTGAAATCAGA[C/T]TGAACTAGATAAAAA	23163
rs4789158	snp	A/G	0.203267	0.245593	intron-variant	GGA3	GRCh38.p7	17:75247253	AAAAAATACATATTT[A/G]TAACCACAAATTTTT	23163
rs4789159	snp	C/T	0.4021	0.198407	intron-variant	GGA3	GRCh38.p7	17:75247294	TGACATGGAGTCTCG[C/T]TCTTGTTGCCCAGGC	23163
rs4789160	snp	A/G	0.198634	0.244666	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260898	CTGACTCGTTAGGAT[A/G]TTCAAGGGGGTATAT	23163
rs5822077	in-del	-/G			intron-variant	GGA3	GRCh38.p7	17:75246214	TCTCTTGCGCCACAT[-/G]GGGCTCAGGGCCCTG	23163
rs5822078	in-del	-/A	0	0	intron-variant	GGA3	GRCh38.p7	17:75250782	AAAAAAAAAAAAAAA[-/A]ATTATATACATATGG	23163
rs6501772	snp	C/T	0.238856	0.249752	upstream-variant-2KB, intron-variant	GGA3, MRPS7	GRCh38.p7	17:75262398	GTCTCCGCGCCGCTC[C/T]CCCTCGTCGGCGCGT	23163
rs7210459	snp	C/T	0.288386	0.247035	intron-variant	GGA3	GRCh38.p7	17:75241886	CATCACCCAGGATGT[C/T]TGTCTAGGTAGCAGT	23163
rs7212309	snp	A/G	0.458315	0.13822	downstream-variant-500B, intron-variant	NUP85, GGA3	GRCh38.p7	17:75235963	CTGCCTCAGCCTCCC[A/G]AGTAGCTGGGATTAT	23163
rs7213757	snp	A/G	0.0360663	0.129354	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75261001	AGCTCTCTGTTCTCT[A/G]TCATCGCTCTCTTTG	23163
rs7216364	snp	A/C	0.0566069	0.158427	downstream-variant-500B, intron-variant	GGA3	GRCh38.p7	17:75236478	GCGTACAGGAACCCG[A/C]ACTTTTAACAAAAAC	23163
rs7216633	snp	A/G	0.28052	0.24813	intron-variant	GGA3	GRCh38.p7	17:75245784	gcctaggccccacag[A/G]gtgctgggactatag	23163
rs7220629	snp	G/T	0	0	downstream-variant-500B, intron-variant	GGA3, NUP85	GRCh38.p7	17:75236177	CTTCCTGTGCCTCCT[G/T]AGATAAGAAATCACC	23163
rs7223104	snp	C/G	0.0174175	0.0916809	intron-variant, missense	NUP85, GGA3	GRCh38.p7	17:75225624	AATCCGGTGCCCTTA[C/G]CTGAGAGCAGGAGCA	23163
rs7223485	snp	A/G	0.0174175	0.0916809	intron-variant	NUP85, GGA3	GRCh38.p7	17:75225887	GGGGGCGCCCTGATG[A/G]GTCATTCTCTTTGAA	23163
rs7223947	snp	C/T			intron-variant	NUP85, GGA3	GRCh38.p7	17:75233377	tttgtttttctttct[C/T]tctctctttctttct	23163
rs7225349	snp	A/G	0.421842	0.181577	intron-variant	GGA3	GRCh38.p7	17:75243928	CAGGGTGTAAGGGCC[A/G]GATGGAAACCTGAGT	23163
rs8064824	snp	C/G	0.105635	0.204335	intron-variant	NUP85, GGA3	GRCh38.p7	17:75229820	GTTGTTGGTGGCTTT[C/G]GTGCAGGCTAAGGCT	23163
rs8066519	snp	A/G	0.282105	0.24793	intron-variant	GGA3	GRCh38.p7	17:75256919	tcatttcttcccttc[A/G]gtcagacacaattcc	23163
rs8066883	snp	C/G	0.220544	0.248259	intron-variant, utr-variant-3-prime	NUP85, GGA3	GRCh38.p7	17:75227073	AAGGTCCCCTTCCTT[C/G]TTGTGCACCCTGGAT	23163
rs8067848	snp	C/T	0.110872	0.20771	intron-variant	GGA3	GRCh38.p7	17:75257069	cgtcttcaagaaaag[C/T]agaacggactaaagg	23163
rs8068084	snp	A/G	0.282895	0.247826	intron-variant	GGA3	GRCh38.p7	17:75256842	atacctcttagtcta[A/G]gtagacactttcact	23163
rs8068490	snp	C/G/T	0.104149	0.203046	intron-variant	NUP85, GGA3	GRCh38.p7	17:75229278	ACCCCATTTCCAGAA[C/G/T]AGCAGGTAGAGGCAC	23163
rs8073890	snp	C/T	0.404733	0.196361	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260452	AGAAGCCTTATGACC[C/T]GCCTGCAACTGCAGA	23163
rs8075276	snp	C/T	0.324915	0.238512	intron-variant, upstream-variant-2KB, missense	GGA3, MRPS7	GRCh38.p7	17:75261905	GGCCAGCCAAGATGG[C/T]TGCCCCCGCAGTGAA	23163
rs8076030	snp	C/T	0.357024	0.225933	intron-variant	NUP85, GGA3	GRCh38.p7	17:75233469	agacagaatcttact[C/T]gctctgtggcccagg	23163
rs8076568	snp	A/T	0.196149	0.244131	intron-variant	NUP85, GGA3	GRCh38.p7	17:75233430	ttcttCTTttctttt[A/T]ttttttctttttttt	23163
rs9302988	snp	C/G	0.281313	0.248031	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260822	CAATGACAGCAATAC[C/G]CTTCTATAACTACAG	23163
rs9652817	snp	C/G	0.3744	0.216852	intron-variant	GGA3	GRCh38.p7	17:75244022	GGACATCAAGACAGA[C/G]AGGCTTCCTTGTGAC	23163
rs9890286	snp	A/G	0.105569	0.204058	intron-variant	GGA3	GRCh38.p7	17:75243332	CTCAGCCTTGCCTGG[A/G]GACAAATGCTGTTCT	23163
rs9890848	snp	A/C	0.105214	0.203807	intron-variant	GGA3	GRCh38.p7	17:75241322	ACCACCACGCTGGCC[A/C]GCCTACACCCGCAGC	23163
rs9897210	snp	A/T	0.109108	0.206518	upstream-variant-2KB, intron-variant	GGA3, MRPS7	GRCh38.p7	17:75264285	AGTATCTAAGTGACA[A/T]CTGGGAGCCCACCTC	23163
rs9899174	snp	A/G	0.498084	0.0308911	intron-variant	GGA3	GRCh38.p7	17:75253175	acccaccagcccaag[A/G]aacatctcaccaatt	23163
rs9900350	snp	A/G	0.499354	0.0179596	intron-variant	GGA3	GRCh38.p7	17:75253668	caatcccttatttcc[A/G]caccccgacctctta	23163
rs9901002	snp	A/C	0.20111	0.245173	intron-variant	GGA3	GRCh38.p7	17:75252943	ataatccaccacacc[A/C]tttgctgactctctt	23163
rs9902741	snp	C/T	0.280785	0.248097	intron-variant	GGA3	GRCh38.p7	17:75239647	CCCAAGGCCCCTGAC[C/T]ATGCTCTTACCCAGG	23163
rs9906345	snp	A/G	0.281313	0.248031	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75261168	GAAGCTTCTCCCTTA[A/G]TCAGGGATTGGGGCG	23163
rs9906606	snp	C/G	0.281313	0.248031	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75261304	CGGTGCCCGACRGGA[C/G]CCCGAGTTCACGCCG	23163
rs9908904	snp	G/T	0.281049	0.248064	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75262228	GCTAAAGAGCTCAGA[G/T]CTGGGATCGCCTGTG	23163
rs9909116	snp	A/G	0.281049	0.248064	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75261300	CCTGCGGTGCCCGAC[A/G]GGASCCCGAGTTCAC	23163
rs9914295	snp	A/G	0	0	intron-variant, downstream-variant-500B	NUP85, GGA3	GRCh38.p7	17:75228600	TTTCTCATGGGATGT[A/G]TCAGTCAGACCCATG	23163
rs9914807	snp	C/T	0.109814	0.206997	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75261176	TCCCTTAGTCAGGGA[C/T]TGGGGCGCTGGGTTC	23163
rs10512603	snp	A/G	0.281049	0.248064	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75260364	TGCCTGCTTTGCTAG[A/G]ATACTTGGTAAACTA	23163
rs10539706	in-del	-/C/GC	0.107087	0.205124	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75262006	GGGTGGCGAGCAGCG[-/C/GC]GGGGGGGCGCTGCGA	23163
rs10567128	in-del	-/TCTTTC	0.5	0	intron-variant	NUP85, GGA3	GRCh38.p7	17:75233386	CTTTCTTTCTCTCTT[-/TCTTTC]TCTTTCTCTTTCTCT	23163
rs10658206	in-del	-/ATT/TTA			intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75259773	CTGGTACAGTTCACA[-/ATT/TTA]TTAAGTCGTAACAAC	23163
rs10664186	in-del	-/ATT	0.350546	0.22889	intron-variant, upstream-variant-2KB	GGA3, MRPS7	GRCh38.p7	17:75259772	ACTGGTACAGTTCAC[-/ATT]ATTAAGTCGTAACAA	23163

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