iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs166484	snp	A/T	0	0	intron-variant	VHL	GRCh38.p7	3:10147997	gagatcctaccacct[A/T]agcctcccaaatagc	7428
rs187873	snp	A/G	0	0	intron-variant	VHL	GRCh38.p7	3:10148011	actcctgggttcaag[A/G]gatcctcccacctaa	7428
rs187874	snp	A/C	0	0	intron-variant	VHL	GRCh38.p7	3:10148004	ggttcaagagatcct[A/C]ccacctaagcctccc	7428
rs192374	snp	C/T	0	0	intron-variant	VHL	GRCh38.p7	3:10148017	cctcaaactcctggg[C/T]tcaagggatcctccc	7428
rs271989	snp	A/G	0	0	intron-variant	VHL	GRCh38.p7	3:10148464	ggactacaggcgccc[A/G]ccactacgcccggct	7428
rs271990	snp	A/C	0	0	intron-variant	VHL	GRCh38.p7	3:10148475	gcccaccactacgcc[A/C]ggctaattttttgta	7428
rs271991	snp	C/T	0	0	intron-variant	VHL	GRCh38.p7	3:10148504	tatttttagtagaga[C/T]ggggtttcaccgttt	7428
rs271992	snp	A/G	0	0	intron-variant	VHL	GRCh38.p7	3:10148525	ttcaccgttttagcc[A/G]ggatggtctcgatct	7428
rs374645	snp	A/G	0.0916144	0.193427	intron-variant	VHL	GRCh38.p7	3:10145487	caatctcctgatctt[A/G]tgatccgcccgcctc	7428
rs391818	snp	C/G	0	0	synonymous-codon	VHL	GRCh38.p7	3:10141937	TGAAGAAGACGGCGG[C/G]GAGGAGTCGGGCGCC	7428
rs409141	snp	C/G	0	0	utr-variant-3-prime	VHL	GRCh38.p7	3:10152937	cacctgaggtcagga[C/G]ctgaagaccagcctg	7428
rs417164	snp	A/C/G	0.000147373	0.00858282	synonymous-codon	VHL	GRCh38.p7	3:10141961	GGACTCTTCCGGGCC[A/C/G]GACTCCTCGGCGCCC	7428
rs458106	snp	A/G	0.0236746	0.106192	utr-variant-3-prime	VHL	GRCh38.p7	3:10151825	ATCCCAGTACTTTGG[A/G]AAGCCAAGGTAAGAG	7428
rs524411	snp	A/G	0.118235	0.212457	intron-variant	VHL	GRCh38.p7	3:10143670	gccaggatggtctcc[A/G]tctcctgcgctcgtg	7428
rs689024	snp	A/C			intron-variant	VHL	GRCh38.p7	3:10148077	ttccagcccaggtga[A/C]agagtgagatcctgt	7428
rs779803	snp	A/G	0.488965	0.0734569	upstream-variant-2KB	VHL	GRCh38.p7	3:10140878	gtgtgattgattacc[A/G]tatgacgcttttatt	7428
rs779804	snp	C/T	0.214239	0.247429	upstream-variant-2KB	VHL	GRCh38.p7	3:10141590	CAAACCTTAGAGGGG[C/T]GAAAAAAAATTTTAT	7428
rs779805	snp	A/G	0.496245	0.0431677	utr-variant-5-prime	VHL	GRCh38.p7	3:10141653	CGCCTCCGTTACAAC[A/G]GCCTACGGTGCTGGA	7428
rs779806	snp	A/G	0.224116	0.248656	intron-variant	VHL	GRCh38.p7	3:10142571	GGCTGGTCTCGAACT[A/G]CTGACCTCGTGATCC	7428
rs779807	snp	A/T	0.496245	0.0431677	intron-variant	VHL	GRCh38.p7	3:10143272	aggagcggggattac[A/T]ggcgtgcgccaccac	7428
rs779808	snp	C/T	0.496245	0.0431677	intron-variant	VHL	GRCh38.p7	3:10143337	tttcgtcattttggc[C/T]aggctggtctcgaac	7428
rs779809	snp	A/G	0.213635	0.247341	intron-variant	VHL	GRCh38.p7	3:10143578	tcagcctcccaagta[A/G]ctgggattacaggca	7428
rs779811	snp	A/T	0.495782	0.0457324	intron-variant	VHL	GRCh38.p7	3:10144830	tttgttacatatgta[A/T]acatgtgccatgttg	7428
rs779812	snp	A/G	0.213333	0.247296	intron-variant	VHL	GRCh38.p7	3:10145330	TGCTATATTTATTCT[A/G]AGACAACCTCCTCCT	7428
rs779813	snp	A/G	0.213333	0.247296	intron-variant	VHL	GRCh38.p7	3:10145428	TGAAAATTCTGggcc[A/G]ggcgcagtggctcac	7428
rs801913	snp	C/G	0.195837	0.244062	utr-variant-3-prime	VHL	GRCh38.p7	3:10152940	agccaggctggtctt[C/G]agctcctgacctcag	7428
rs1058854	snp	A/G	0	0	utr-variant-3-prime	VHL	GRCh38.p7	3:10151791	AGAGTGACGGCTggc[A/G]tggtggctcccgcct	7428
rs1058866	snp	C/T			utr-variant-3-prime	VHL	GRCh38.p7	3:10153466	AAAAAAAACATGCCG[C/T]TTGAGTACTGTGTTT	7428
rs1136245	snp	A/G	0	0	utr-variant-3-prime	VHL	GRCh38.p7	3:10151143	cctcagcctcccaaa[A/G]tggtgggattacagg	7428
rs1136249	snp	G/T	0.495213	0.048687	utr-variant-3-prime	VHL	GRCh38.p7	3:10151999	ttaggaattggaggc[G/T]gcagtgagccatgag	7428
rs1136250	snp	A/G	0	0	utr-variant-3-prime	VHL	GRCh38.p7	3:10153378	AGGTTGCAGTGAGCC[A/G]AGATCACACCATTGC	7428
rs1136254	snp	A/G	0	0	utr-variant-3-prime	VHL	GRCh38.p7	3:10152222	AAAAATACAAGAATT[A/G]GCTGGGTGTGGTGGC	7428
rs1136255	snp	A/C			utr-variant-3-prime	VHL	GRCh38.p7	3:10152290	aggagaatcacttga[A/C]cccaggaggcgaaga	7428
rs1642729	snp	A/G	0.213333	0.247296	intron-variant	VHL	GRCh38.p7	3:10145693	CCTGGGCGACAGAGC[A/G]AGACTGCATCTCAAA	7428
rs1642739	snp	G/T	0.208779	0.246578	downstream-variant-500B	VHL	GRCh38.p7	3:10153801	ATCCAGGGTTGGAAA[G/T]AGAAGAGACTTGGAA	7428
rs1642740	snp	C/T			utr-variant-3-prime	VHL	GRCh38.p7	3:10152549	gcagagatcgcacca[C/T]tgcactccagcctgg	7428
rs1642741	snp	A/G	0.209084	0.246629	utr-variant-3-prime	VHL	GRCh38.p7	3:10151078	AGCCTGGCCAACATG[A/G]CGAAACACTGTCTCT	7428
rs1642742	snp	C/T	0.493477	0.0567349	utr-variant-3-prime	VHL	GRCh38.p7	3:10150259	ACTGAATTACTTATA[C/T]AAACCTCCTTACATA	7428
rs1642743	snp	A/G	0.490673	0.0676508	intron-variant	VHL	GRCh38.p7	3:10148783	tgaagcaggagaatc[A/G]cttgaacccgagagg	7428
rs1678593	snp	A/T	0.49614	0.0437598	intron-variant	VHL	GRCh38.p7	3:10144763	tataataaaaaattt[A/T]aaaaaaaTAAAAAAG	7428
rs1678594	snp	A/G/T			intron-variant	VHL	GRCh38.p7	3:10142362	gactccgtctcaaaa[A/G/T]aaataaataaataaa	7428
rs1678595	snp	A/C	0.420892	0.182472	utr-variant-3-prime	VHL	GRCh38.p7	3:10153619	AAACAGCTTTAAAAA[A/C]AAAAAAAAAAAAAAA	7428
rs1678606	snp	A/G	0.21303	0.247251	intron-variant	VHL	GRCh38.p7	3:10147114	TGAGACAAGAGAATC[A/G]CTGGAACCCAGTAGG	7428
rs1678607	snp	A/C	0.25634	0.24992	intron-variant	VHL	GRCh38.p7	3:10146744	CAAAAAGATTGGATA[A/C]CGTGCCTGACATCAG	7428
rs1681660	snp	C/T	0.214541	0.247473	intron-variant	VHL	GRCh38.p7	3:10148245	ATTTGCCTTATAGAA[C/T]ACCCTCGAGTACGTT	7428
rs1681668	snp	A/G	0.493568	0.0563433	utr-variant-3-prime	VHL	GRCh38.p7	3:10151025	AGCGTGGTGGCAGGC[A/G]CCTGTAATCCCAGCT	7428
rs1681669	snp	C/T	0.485664	0.0834419	utr-variant-3-prime	VHL	GRCh38.p7	3:10150988	GAGGATTACGTGAAC[C/T]CAGGAGGCAGAGGTT	7428
rs1703153	snp	C/G	0.49306	0.0584955	intron-variant	VHL	GRCh38.p7	3:10149535	cagtgtcgcttcatc[C/G]acattcagttagtta	7428
rs1798965	snp	A/T	0	0	intron-variant	VHL	GRCh38.p7	3:10142346	TCAGAGCAttctttt[A/T]tttatttatttattt	7428
rs1805159	snp	C/G			synonymous-codon	VHL	GRCh38.p7	3:10142138	CGGCGAGCCGCAGCC[C/G]TACCCAACGCTGCCG	7428
rs2366325	snp	A/T			intron-variant	VHL	GRCh38.p7	3:10142350	AGCAttcttttattt[A/T]tttatttatttattt	7428
rs2543458	snp	G/T	0.213937	0.247385			GRCh38.p7	3:10145950	AAAGGGCATGGGATT[G/T]AGAGCTTTAAGTACG	7428
rs2600005	snp	C/T	0.405603	0.195673			GRCh38.p7	3:10148977	tatgaacaaataaaa[C/T]ggtgggctgggcgca	7428
rs2600006	snp	C/T	0.459574	0.136304			GRCh38.p7	3:10148893	ctgagctcaagagtt[C/T]aagatcagcctggtc	7428
rs2600015	snp	C/G					GRCh38.p7	3:10152755	cacctgtaatcccag[C/G]actttgggaggctga	7428
rs2600016	snp	A/G					GRCh38.p7	3:10152754	acctgtaatcccagc[A/G]ctttgggaggctgag	7428
rs2626573	snp	A/G			intron-variant	VHL	GRCh38.p7	3:10143585	tagtgcgtgcctgta[A/G]tcccagttacttggg	7428
rs2930789	snp	C/G			utr-variant-3-prime	VHL	GRCh38.p7	3:10152739	ttgtgatccacccac[C/G]tcagcctcccaaagt	7428
rs3087462	snp	C/T	0.0554779	0.157039	utr-variant-5-prime	VHL	GRCh38.p7	3:10141771	AGGTCGACTCGGGAG[C/T]GCGCACGCAGCTCCG	7428
rs4019643	snp	A/T			intron-variant	VHL	GRCh38.p7	3:10142354	ttcttttatttattt[A/T]tttatttattttgag	7428
rs4019644	snp	A/T			intron-variant	VHL	GRCh38.p7	3:10142358	tttatttatttattt[A/T]tttattttgagacgg	7428
rs5030648	in-del	-/TCT			cds-indel	VHL	GRCh38.p7	3:10142074	CCTCCCAGGTCATCT[-/TCT]GCAATCGCAGTCCGC	7428
rs5030649	in-del	-/T	0	0	frameshift-variant, intron-variant	VHL	GRCh38.p7	3:10146557	GACACACGATGGGCT[-/T]CTGGTTAACYAAACT	7428
rs5030650	in-del	-/TG			frameshift-variant	VHL	GRCh38.p7	3:10149904	AAGACCACCCAAATG[-/TG]CAGAAAGACCTGGAG	7428
rs5030651	in-del	-/C	0	0	frameshift-variant	VHL	GRCh38.p7	3:10142030	CGGGCGGCCGCGGCC[-/C]GTGCTGCGCTCGGTG	7428
rs5030802	snp	A/G/T	2.97748e-05	0.0038583	VHL	3	allele_origin=G(germline)/A(germline)	3:10142055	TCGGTGAACTCGCGC[A/G/T]AGCCCTCCCAGGTCA	7428
rs5030803	snp	G/T	0	0	missense	VHL	GRCh38.p7	3:10142068	GCGAGCCCTCCCAGG[G/T]CATCTTCTGCAATCG	7428
rs5030804	snp	A/G	0	0	missense	VHL	GRCh38.p7	3:10142080	AGGTCATCTTCTGCA[A/G]TCGCAGTCCGCGCGT	7428
rs5030805	snp	A/G/T	0	0	missense	VHL	GRCh38.p7	3:10142086	TCTTCTGCAATCGCA[A/G/T]TCCGCGCGTCGTGCT	7428
rs5030807	snp	A/C/T	0	0	VHL	3	allele_origin=T(germline)/A(germline)/C(germline)	3:10142113	TGCTGCCCGTATGGC[A/C/T]CAACTTCGACGGCGA	7428
rs5030808	snp	A/C/G	0	0	VHL	3	allele_origin=G(germline)/A(germline)	3:10142124	TGGCTCAACTTCGAC[A/C/G]GCGAGCCGCAGCCCT	7428
rs5030809	snp	C/T	0	0	VHL	3	allele_origin=T(germline)/C(germline)	3:10142139	GGCGAGCCGCAGCCC[C/T]ACCCAACGCTGCCGC	7428
rs5030810	snp	A/C/T	2.19262e-05	0.00331099	synonymous-codon, stop-gained	VHL	GRCh38.p7	3:10142184	CGCATCCACAGCTAC[A/C/T]GAGGTACGGGCCCGG	7428
rs5030811	snp	C/T	0	0	missense, intron-variant	VHL	GRCh38.p7	3:10146516	CTTGTCCCGATAGGT[C/T]RCCTTTGGCYCTTCA	7428
rs5030813	snp	C/T	0	0	stop-gained, intron-variant	VHL	GRCh38.p7	3:10146567	GGGCTNCTGGTTAAC[C/T]AAACTGAATTATKTG	7428
rs5030816	snp	A/G/T			splice-acceptor-variant	VHL	GRCh38.p7	3:10149785	GGTTTTTGCCCTTCC[A/G/T]GTGTATACTCTGAAA	7428
rs5030817	snp	A/G			splice-acceptor-variant	VHL	GRCh38.p7	3:10149786	GTTTTTGCCCTTCCA[A/G]TGTATACTCTGAAAG	7428
rs5030818	snp	C/G/T	0	0	VHL	3	allele_origin=T(germline)/C(germline)	3:10149804	TATACTCTGAAAGAG[C/G/T]GATGCCTCCAGGTTG	7428
rs5030819	snp	C/T	0	0	stop-gained	VHL	GRCh38.p7	3:10149813	AAAGAGCGATGCCTC[C/T]AGGTTGTCCGGAGCC	7428
rs5030820	snp	C/G/T	1.65132e-05	0.00287339	VHL	3	allele_origin=G(germline)/T(germline)/C(germline)	3:10149822	TGCCTCCAGGTTGTC[C/G/T]GGAGCCTAGTCAAGC	7428
rs5030821	snp	A/G	0	0	VHL	3	allele_origin=G(germline)/A(germline)	3:10149823	GCCTCCAGGTTGTCC[A/G]GAGCCTAGTCAAGCC	7428
rs5030822	snp	A/T	0	0	missense	VHL	GRCh38.p7	3:10149856	AGAATTACAGGAGAC[A/T]GGACATCGTCAGGTC	7428
rs5030823	snp	A/C/T	1.65244e-05	0.00287436	VHL	3	allele_origin=A(somatic)/C(germline)	3:10149871	TGGACATCGTCAGGT[A/C/T]GCTCTACGAAGATCT	7428
rs5030824	snp	C/G	3.30622e-05	0.00406571	VHL	3	allele_origin=G(germline)/C(germline)	3:10149885	TCGCTCTACGAAGAT[C/G]TGGAAGACCACCCAA	7428
rs5030825	snp	C/T	0	0	stop-gained	VHL	GRCh38.p7	3:10149906	GACCACCCAAATGTG[C/T]AGAAAGACCTGGAGC	7428
rs5030826	snp	A/C/G/T	0	0	VHL	3	allele_origin=G(germline)/T(germline)/C(germline)	3:10142041	GGCCCGTGCTGCGCT[A/C/G/T]GGTGAACTCGCGCGA	7428
rs5030827	snp	G/T	0	0	VHL	3	allele_origin=G(germline)/T(germline)	3:10142097	CGCAGTCCGCGCGTC[G/T]TGCTGCCCGTATGGC	7428
rs5030828	snp	C/T	0	0	VHL	3	allele_origin=T(germline)/C(somatic)	3:10142101	GTCCGCGCGTCGTGC[C/T]GCCCGTATGGCTCAA	7428
rs5030829	snp	A/G/T	0	0	VHL	3	allele_origin=G(germline)/A(germline)	3:10142127	CTCAACTTCGACGGC[A/G/T]AGCCGCAGCCCTACC	7428
rs5030830	snp	C/T	0	0	missense, intron-variant	VHL	GRCh38.p7	3:10146526	TAGGTYRCCTTTGGC[C/T]CTTCAGAGRTGCAGG	7428
rs5030832	snp	A/G	0	0	missense, intron-variant	VHL	GRCh38.p7	3:10146535	TTTGGCYCTTCAGAG[A/G]TGCAGGGACACACGA	7428
rs5030833	snp	C/G/T	1.64727e-05	0.00286986	missense, intron-variant	VHL	GRCh38.p7	3:10146580	ACYAAACTGAATTAT[C/G/T]TGTGCCATCTCTCAA	7428
rs5030834	snp	C/T	0.000922099	0.0214523	VHL	3	allele_origin=T(germline)/C(germline)	3:10146644	ACTGCCAGGTACTGA[C/T]GTTTTACTTTTTAAA	7428
rs5030835	snp	C/G	0	0	VHL	3	allele_origin=G(germline)/C(germline)	3:10149848	CAAGCCTGAGAATTA[C/G]AGGAGACTGGACATC	7428
rs7629500	snp	A/G	0.0520825	0.152737	utr-variant-3-prime	VHL	GRCh38.p7	3:10150788	GCATGTTTGATTATA[A/G]TATTAATGGACAAAT	7428
rs7645730	snp	A/T	0	0	intron-variant	VHL	GRCh38.p7	3:10147375	tttttttttttttta[A/T]ttttatttttagaga	7428
rs9819196	snp	A/G	0.140919	0.224948	intron-variant	VHL	GRCh38.p7	3:10146200	ttttttggagacgga[A/G]tcttgctctgtcacc	7428
rs9822696	snp	A/G	0.00874735	0.0655527	utr-variant-3-prime	VHL	GRCh38.p7	3:10151925	ttaaaaattagcatg[A/G]cggcacacatctgta	7428
rs9829048	snp	G/T	0.0554779	0.157039	intron-variant	VHL	GRCh38.p7	3:10147645	gctgggattacaggc[G/T]tgagccactgcgtcc	7428
rs9829290	snp	A/G	0.222333	0.248464	intron-variant	VHL	GRCh38.p7	3:10147809	GACCAGCAGTGTGTG[A/G]TGGCTCCTGCCTGTA	7428

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