iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs1044110	snp	A/T	0	0	utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113292335	GGTACATGCTTCAGG[A/T]CTACATATGACCCAG	9128
rs1138958	snp	A/G	0.00905374	0.0666701	missense, utr-variant-5-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113278969	TTGAAATTGAAGAGC[A/G]TATCAGCGAGCGACA	9128
rs2418248	snp	A/C	0.00318978	0.0398085	intron-variant	PRPF4	GRCh38.p7	9:113289926	GGAATCCTGTTATTA[A/C]AATAGCCACTAggtt	9128
rs2418249	snp	C/T	0.262985	0.249663	utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113291760	TATCATGTTTTCTGC[C/T]AATTACCATGCATAG	9128
rs3183794	snp	A/T	0	0	utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113292691	GTTTAGAAAGCAAAC[A/T]TGACGTCTCTATTGT	9128
rs3810917	snp	A/C	0.316726	0.240931	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113274181	CGAAGCAAGCTGTTC[A/C]GTTTGGTTAATAATT	9128
rs3810918	snp	A/G	0.316	0.241131	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113274286	AAAGTATGTACAGAT[A/G]CAAATTATTACACGT	9128
rs3810919	snp	C/T	0.270892	0.249126	upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113275614	CGGGGGCGGTGACCC[C/T]TCTTGGCCCACGTCT	9128
rs4524864	snp	C/T	0.283421	0.247756	intron-variant	PRPF4	GRCh38.p7	9:113279525	CCTGCCACCACATTT[C/T]TCTTTTTTGTATTTT	9128
rs4979231	snp	C/G	0.485255	0.0845871	intron-variant	PRPF4	GRCh38.p7	9:113286475	ACTTTTCTCTCATGT[C/G]CAGTCACACTCTGGC	9128
rs4979232	snp	A/G	0.371177	0.218669	intron-variant	PRPF4	GRCh38.p7	9:113286594	AATAGTTCATGTTTT[A/G]ATAGTTGAATAGTCA	9128
rs5900048	in-del	-/A	0.219349	0.248114	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113274536	AGGGGGAAAAAAAAA[-/A]TCTATACATTTTACC	9128
rs6478000	snp	A/G	0.484491	0.0866827	intron-variant	PRPF4	GRCh38.p7	9:113290044	ggccaacatagtgaa[A/G]ccccatctctatgaa	9128
rs7847295	snp	C/T	0.370568	0.219005	intron-variant	PRPF4	GRCh38.p7	9:113290158	ccgggaggtggaggt[C/T]gcagtgagccaagat	9128
rs7858004	snp	A/G	0.0611083	0.163768	intron-variant	PRPF4	GRCh38.p7	9:113289825	CCAATTTAGGGCCTA[A/G]TAAATGTATAAATGC	9128
rs10116039	snp	C/T	0.464523	0.128375	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113275900	GGCTGCGGGACTCAG[C/T]GGTGTCCTACACAGC	9128
rs10117320	snp	A/G	0.0611083	0.163768	utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113292794	AAAAAACCCTAATGG[A/G]TGTTCCTAAACCTAA	9128
rs10120404	snp	A/G	0.325563	0.238307	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113273845	AAAAAAAAAAAAAAA[A/G]AGGCTCAAGAGAGCA	9128
rs10122180	snp	A/G	0.155987	0.23165	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113275898	AAGGCTGCGGGACTC[A/G]GCGGTGTCCTACACA	9128
rs10733604	snp	A/C	0.167809	0.236103	intron-variant	PRPF4	GRCh38.p7	9:113279983	TCCACTGTCTCATCT[A/C]CCCTTCATCATCCAG	9128
rs10759638	snp	G/T	0.485187	0.0847778	intron-variant	PRPF4	GRCh38.p7	9:113280212	CCTTCACTCTCCTAA[G/T]AACAAATCCTCTTGA	9128
rs10817474	snp	G/T	0.373397	0.217424	intron-variant	PRPF4	GRCh38.p7	9:113278160	TATAACCCCCATTTT[G/T]CATTTATATACCATT	9128
rs10981712	snp	C/G	0.419135	0.184101	intron-variant	PRPF4	GRCh38.p7	9:113283846	CAGAGGCAGGCGGAT[C/G]ACTTGAGCCTCAGGA	9128
rs10981713	snp	C/T	0.232359	0.249377	intron-variant	PRPF4	GRCh38.p7	9:113284655	GTATTTTGGAACAGG[C/T]CCTGTAGTGAGTTTA	9128
rs10981714	snp	C/T	0.179217	0.23977	intron-variant	PRPF4	GRCh38.p7	9:113286697	TTGCATCTCTTACAC[C/T]CCTTTAGGGCATAAC	9128
rs10981715	snp	C/T	0.482831	0.0910472	intron-variant	PRPF4	GRCh38.p7	9:113287218	GGATCTTGATTTTTG[C/T]CTATAGCCTAGTGAC	9128
rs10981716	snp	A/G			intron-variant	PRPF4	GRCh38.p7	9:113288017	TACTCCTTTGGTGCA[A/G]AATGACTATTTTGCT	9128
rs10981717	snp	A/T			intron-variant	PRPF4	GRCh38.p7	9:113288611	ccagctaattttttt[A/T]tttttagtagagaca	9128
rs10981718	snp	C/G	0.231189	0.249291	intron-variant	PRPF4	GRCh38.p7	9:113290171	GTTGCAGTGAGCCAA[C/G]ATTGCGCCACTGTGC	9128
rs10981719	snp	A/G	0.231189	0.249291	intron-variant	PRPF4	GRCh38.p7	9:113290258	CTAGAGGTTTACAGC[A/G]ATTCCATGGTTTTCA	9128
rs10981720	snp	C/T	0.318174	0.240525			GRCh38.p7	9:113293831	CTGAATTCTCAGGAC[C/T]ACCCTCTGTTGCTCA	9128
rs11552582	snp	A/G	0.465501	0.126725	synonymous-codon, utr-variant-5-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113282718	TGATGAGAAGTCTAA[A/G]AAGTCCAAAGAAGAG	9128
rs11789755	snp	A/G	0.461592	0.133149	utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113292796	AAAACCCTAATGGGT[A/G]TTCCTAAACCTAAAC	9128
rs11789775	snp	C/G	0.190519	0.242821	downstream-variant-500B	PRPF4	GRCh38.p7	9:113292920	AGCCATTGGTCCATA[C/G]AGGTCTCTTTTTTTT	9128
rs12005543	snp	C/G	0.0966517	0.197444	intron-variant	PRPF4	GRCh38.p7	9:113281348	GTTTGTTTTTTCCAC[C/G]AGCAAAGTCTATCTT	9128
rs12236683	snp	C/T	0.4711	0.116682	intron-variant	PRPF4	GRCh38.p7	9:113285673	GTGAGCCACAGCGCC[C/T]GGCCCAAAAAATTTT	9128
rs12337200	snp	A/G	0.0614824	0.164198	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113274441	CTTTGTACTAAATCA[A/G]GCATTATCTTCTACC	9128
rs12341669	snp	A/G	0.203267	0.245593	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293286	gaggcggaggttgca[A/G]tgagccaagatcaca	9128
rs12342197	snp	A/C	0.203882	0.245709	intron-variant	PRPF4	GRCh38.p7	9:113288787	CAGAGTTACAAATTA[A/C]CAGAAAACAAGGATT	9128
rs12342549	snp	G/T	0.203267	0.245593	intron-variant	PRPF4	GRCh38.p7	9:113278781	AGCTGTGTCATTTAG[G/T]TTTATGTGTTTGGCA	9128
rs12343330	snp	C/T	0.165853	0.235413	upstream-variant-2KB, utr-variant-5-prime	PRPF4, CDC26	GRCh38.p7	9:113275417	CCCCTTCCCGGAACC[C/T]CGGCTCCCCCCCAAC	9128
rs12343629	snp	C/T	0.4628	0.13121	intron-variant	PRPF4	GRCh38.p7	9:113279301	TAGGCCAATTTTTAC[C/T]GCACTATTAATGTTT	9128
rs12348629	snp	A/T	0.203575	0.245652	intron-variant	PRPF4	GRCh38.p7	9:113279838	GACATAGAACAATGA[A/T]AAATGTTTCTTGGAT	9128
rs12351168	snp	A/G	0.203575	0.245652	intron-variant	PRPF4	GRCh38.p7	9:113288424	GTTTAATATAGTGAG[A/G]GCTAAGTATATTTGC	9128
rs12352634	snp	A/G			intron-variant	PRPF4	GRCh38.p7	9:113282477	CTCATCTCTTAAAAA[A/G]AAAAAAAAAAGGTTG	9128
rs12352784	snp	A/G	0.128288	0.218372	intron-variant	PRPF4	GRCh38.p7	9:113282794	GGGGATAGGTCTCTC[A/G]TTTTCTGCTTTCAAT	9128
rs12352925	snp	A/T	0.16028	0.233346	intron-variant	PRPF4	GRCh38.p7	9:113279897	TAATGCCCTCTTGTT[A/T]TTTGCAGGTTGCGAA	9128
rs12683185	snp	C/T			intron-variant	PRPF4	GRCh38.p7	9:113281014	cctggctaatttctg[C/T]atttttagtagagac	9128
rs12683920	snp	C/T	0.0995161	0.199636	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113277067	atccgcccgcctcgt[C/T]ctcctaaagtgctgg	9128
rs12686308	snp	C/T	0	0	intron-variant	PRPF4	GRCh38.p7	9:113281952	ATCAAGAACTGATTC[C/T]TAGTCATCACTGTAT	9128
rs13286930	snp	A/C	0	0	intron-variant	PRPF4	GRCh38.p7	9:113280408	cagcttaggtatccc[A/C]caggtacttcaaact	9128
rs13298925	snp	C/T	0.0283406	0.115616	intron-variant	PRPF4	GRCh38.p7	9:113291165	TTATAATTTCCTTCC[C/T]TCTGCCATACCCTTA	9128
rs16931980	snp	C/G	0.0275645	0.114116	utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	PRPF4, CDC26	GRCh38.p7	9:113275689	GGGCGCGCGGTGGAC[C/G]GTCTGAAAGGGAGTG	9128
rs16931988	snp	C/T	0.151334	0.229706	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113276228	GTGATAAGCAGTAAT[C/T]CGGGAAGCATAAAAC	9128
rs16932061	snp	C/T	0.093777	0.195178	intron-variant	PRPF4	GRCh38.p7	9:113280548	TCTACTTGCGAGATA[C/T]AACTCCAGCTATCTT	9128
rs16932083	snp	A/G	0.158632	0.232706	intron-variant	PRPF4	GRCh38.p7	9:113282992	ATAGAAAAAAATTCA[A/G]TAGAAAGTCCTCTGC	9128
rs16932273	snp	C/T	0.0437281	0.141251	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293167	AAATTCAAAAAAATA[C/T]ATAGGAATTTGGAAG	9128
rs17763934	snp	A/G	0.196149	0.244131	intron-variant	PRPF4	GRCh38.p7	9:113282808	CGTTTTCTGCTTTCA[A/G]TGGTTTGTTTTGCTG	9128
rs17764013	snp	A/T	0.202035	0.245356	intron-variant	PRPF4	GRCh38.p7	9:113284500	TTTCTCTGCTTCTCA[A/T]GATCACACCAAACTA	9128
rs17831256	snp	C/T	0.0777841	0.181223	intron-variant	PRPF4	GRCh38.p7	9:113280587	TATCTTTACTGCTTT[C/T]AAATCTGCACTGTTG	9128
rs17831500	snp	A/C	0.193028	0.243422	intron-variant	PRPF4	GRCh38.p7	9:113285192	TTGAAAAATTTCCAA[A/C]ATAAGAAGTCTCTAA	9128
rs28733164	snp	A/G	0.16028	0.233346	intron-variant	PRPF4	GRCh38.p7	9:113280747	TACTAGAATAGCCAC[A/G]TTGGTCCTTATGGAA	9128
rs34193522	in-del	-/C			intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113277070	CGCCCGCCTCGTCCT[-/C]CTAAAGTGCTGGGAT	9128
rs34341868	in-del	-/G					GRCh38.p7	9:113294262	CTAGATGGTATACCA[-/G]GGCACATTCAGATAC	9128
rs34886208	in-del	-/T			intron-variant	PRPF4	GRCh38.p7	9:113282367	TCCCAGCCACTCGGG[-/T]AGGCTGGAGTGGGAG	9128
rs35048567	in-del	-/C			intron-variant	PRPF4	GRCh38.p7	9:113284655	TATTTTGGAACAGGT[-/C]CCTGTAGTGAGTTTA	9128
rs35176754	in-del	-/G			intron-variant	PRPF4	GRCh38.p7	9:113279656	GCCTCCCAAAGTGCT[-/G]GGGATTACAAGCGTG	9128
rs35438287	in-del	-/T			frameshift-variant, nc-transcript-variant	PRPF4	GRCh38.p7	9:113291586	AAGTGATGGGCCTAG[-/T]ATATTTCTTCCGATG	9128
rs35653096	in-del	-/C			utr-variant-3-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113291999	GGTAGATCGCTTGAG[-/C]CTCAGGAGTTCAAGA	9128
rs35752383	in-del	-/C			frameshift-variant, nc-transcript-variant	PRPF4	GRCh38.p7	9:113290476	TTAGCTATGACCGTT[-/C]CATGGCGCTTATGGG	9128
rs36114176	in-del	-/T	0.487995	0.0765403	intron-variant	PRPF4	GRCh38.p7	9:113288441	CTAAGTATATTTGCC[-/T]TTTTTTTTTTTTTGA	9128
rs41276777	snp	A/G	0.0107246	0.0724382	upstream-variant-2KB, utr-variant-5-prime	PRPF4, CDC26	GRCh38.p7	9:113275412	CCTAGCCCCTTCCCG[A/G]AACCTCGGCTCCCCC	9128
rs41276779	snp	A/C	0.0178098	0.0926698	upstream-variant-2KB, utr-variant-5-prime	PRPF4, CDC26	GRCh38.p7	9:113275427	GAACCTCGGCTCCCC[A/C]CCAACGAAACTACTG	9128
rs41276781	snp	A/C	0.0023933	0.0345097	intron-variant	PRPF4	GRCh38.p7	9:113287990	AAGCATGTTTTCTTT[A/C]TAGAATCCAGGTACT	9128
rs41276783	snp	A/C	0.0209421	0.100162	intron-variant	PRPF4	GRCh38.p7	9:113288053	GGCCAAAGTAGTTTA[A/C]AAGTGTAGTTACAAT	9128
rs41276785	snp	C/T	0.0271762	0.113356	intron-variant	PRPF4	GRCh38.p7	9:113288078	TACAATTTAGCCTCT[C/T]GTGTTGTACAGAATG	9128
rs41276787	snp	C/T	0.000399281	0.0141238	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293130	TCAACTATACAGCCT[C/T]TGAACTCTCAAATTA	9128
rs41296057	snp	A/G			missense, utr-variant-5-prime, nc-transcript-variant	PRPF4	GRCh38.p7	9:113283400	GCAGGGCAATGAAAC[A/G]CTTGGAAGAGGCCCG	9128
rs41312198	snp	A/G	0.0136989	0.0816197	intron-variant	PRPF4	GRCh38.p7	9:113290835	CACTGAATGAGGGGC[A/G]AAAAAGGGTTCTGGG	9128
rs57787264	snp	A/G/T	0.0166389	0.0897333	intron-variant	PRPF4	GRCh38.p7	9:113291074	CAGTATTGTGTTCCC[A/G/T]TGGAATGCAGGCCAG	9128
rs58191876	snp	C/T	0.00914312	0.0669923	intron-variant	PRPF4	GRCh38.p7	9:113282159	TGGGAGTTTAGCCAT[C/T]CCCACTTGACTCTTA	9128
rs60754850	snp	G/T			intron-variant	PRPF4	GRCh38.p7	9:113279340	TGTTTGTTCGTTTTT[G/T]TTTTGTTTTGTTTTG	9128
rs61258390	snp	A/T			intron-variant	PRPF4	GRCh38.p7	9:113278054	CCTGTATTTTTAAAA[A/T]TAATTGATTGTATAT	9128
rs61737726	snp	A/G	0.000296467	0.0121715	synonymous-codon, nc-transcript-variant	PRPF4	GRCh38.p7	9:113291543	CCCAGGCTGGTCCCC[A/G]CTGAAGACTCTGGCT	9128
rs71367710	in-del	-/CA	0	0	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113277406	AGAGTGAGACCCTGT[-/CA]CACACACACACACAC	9128
rs71367712	in-del	-/G	0	0	intron-variant	PRPF4	GRCh38.p7	9:113284268	AAAAAATACACACAC[-/G]GGTGATCATTAATAG	9128
rs71367713	in-del	-/AAAAAAAAAAAAAAAAAAAAAAAAAA	0	0	intron-variant	PRPF4	GRCh38.p7	9:113285371	GTGACACTCCGTCTC[-/AAAAAAAAAAAAAAAAAAAAAAAAAA]AAAAAAAAAAAAAAA	9128
rs72758269	snp	A/G	0.0146672	0.084371	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293222	AGTTATTAAAGAAAG[A/G]CTTCTTGGCCGGGCA	9128
rs73537011	snp	A/G	0.0524604	0.153226			GRCh38.p7	9:113294223	AGATAAACAGCCACC[A/G]TTTCACAGAACACTT	9128
rs73655856	snp	A/T	0.0337553	0.125452	intron-variant	PRPF4	GRCh38.p7	9:113285026	TAGGCTGACCTTTAG[A/T]TGGGTTCAGGAGAAA	9128
rs74380630	snp	A/G	0.0185938	0.0946107	upstream-variant-2KB, intron-variant, utr-variant-5-prime	PRPF4, CDC26	GRCh38.p7	9:113274913	CGCCCATGTGGGGAT[A/G]AAAACCTTATCCTGT	9128
rs74415671	snp	A/G	0.0115144	0.0749975	intron-variant	PRPF4	GRCh38.p7	9:113279910	TTATTTGCAGGTTGC[A/G]AAGTCTTAGTTGTGG	9128
rs74431834	snp	C/T	0.0379877	0.132479			GRCh38.p7	9:113294222	AAGATAAACAGCCAC[C/T]GTTTCACAGAACACT	9128
rs74586570	snp	A/G	0.5	0	upstream-variant-2KB, intron-variant	PRPF4, CDC26	GRCh38.p7	9:113273844	AAAAAAAAAAAAAAA[A/G]AAGGCTCAAGAGAGC	9128
rs74627363	snp	C/G	0.231189	0.249291	intron-variant	PRPF4	GRCh38.p7	9:113288946	TAAGTGTACAATGCT[C/G]TCAGTCTTTACAAAC	9128
rs74730701	snp	G/T	0.0142736	0.0832652	intron-variant	PRPF4	GRCh38.p7	9:113282811	TTTCTGCTTTCAATG[G/T]TTTGTTTTGCTGAGA	9128
rs74882862	snp	A/G	0.0437281	0.141251	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293233	AAAGGCTTCTTGGCC[A/G]GGCACGGTGGCTCAC	9128
rs75013716	snp	C/T	0.000399281	0.0141238	intron-variant, upstream-variant-2KB	PRPF4, CDC26	GRCh38.p7	9:113276478	ACTCAGGGTGAGCTT[C/T]ATCCTCTGGTGAAGT	9128
rs75102076	snp	A/T	0.000399281	0.0141238	downstream-variant-500B	PRPF4	GRCh38.p7	9:113293015	GTTAACAATTTTTTT[A/T]AAAATAGAAGGCTGT	9128
rs75299327	snp	A/G	0.00716266	0.059414	intron-variant	PRPF4	GRCh38.p7	9:113289107	AAATTAATTATGTCT[A/G]TTCATACTGTGAATT	9128

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